RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 LRRC59Q96AG4 307 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 PUS7Q96PZ0 661 aaKnown RBP7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 NALCNQ8IZF0 1738 aa7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 TULP4Q9NRJ4 1543 aa7.83□□□□□ -1.16
CTNNA1-220ENST00000520260 MINK1Q8N4C8 1332 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 C1orf167Q5SNV9 1468 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 HAP1P54257 671 aaPredicted RBP7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 MST1RQ04912 1400 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 WAPLQ7Z5K2 1190 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 ARHGEF28Q8N1W1 1705 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 NGDNQ8NEJ9 315 aaKnown RBP7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 ARHGEF10O15013 1369 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 USP47Q96K76 1375 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 JCADQ9P266 1359 aa7.82□□□□□ -1.16
CTNNA1-220ENST00000520260 SPATA31A6Q5VVP1 1343 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 HDGFL2Q7Z4V5 671 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 FOXD4L1Q9NU39 408 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 TERF2IPQ9NYB0 399 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 PHF8Q9UPP1 1060 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 CCDC61Q9Y6R9 512 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 ROBO1Q9Y6N7 1651 aa7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
CTNNA1-220ENST00000520260 QRICH2Q9H0J4 1663 aa7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 NBPF1Q3BBV0 1214 aa7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 MEX3CQ5U5Q3 659 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 BRINP3Q76B58 766 aa7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 RBM33Q96EV2 1170 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 FMN2Q9NZ56 1722 aa7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 XIRP1Q702N8 1843 aaKnown RBP7.8□□□□□ -1.16
CTNNA1-220ENST00000520260 PHLPP1O60346 1717 aa7.79□□□□□ -1.16
CTNNA1-220ENST00000520260 HIRIP3Q9BW71 556 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-220ENST00000520260 CDK19Q9BWU1 502 aa7.79□□□□□ -1.16
CTNNA1-220ENST00000520260 MKRN4PQ13434 485 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-220ENST00000520260 NUDT16Q96DE0 195 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-220ENST00000520260 PLEKHH1Q9ULM0 1364 aa7.78□□□□□ -1.16
CTNNA1-220ENST00000520260 ATP7BP35670 1465 aa7.78□□□□□ -1.16
CTNNA1-220ENST00000520260 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 HSPA1LP34931 641 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 NBPF8Q3BBV2 869 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 MAMSTRQ6ZN01 415 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 METRNQ9UJH8 293 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 PPIP5K1Q6PFW1 1433 aa7.77□□□□□ -1.17
CTNNA1-220ENST00000520260 ST20-MTHFSA0A0A6YYL1 179 aa7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 PAK3O75914 559 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 LMOD2Q6P5Q4 547 aa7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 TMC1Q8TDI8 760 aa7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 NHSL1Q5SYE7 1610 aa7.76□□□□□ -1.17
CTNNA1-220ENST00000520260 PLEKHG3A1L390 1219 aa7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 NUTM2FA1L443 756 aa7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 FOXO3O43524 673 aa7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 TNS3Q68CZ2 1445 aa7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 SOS2Q07890 1332 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 TTC21AQ8NDW8 1320 aa7.75□□□□□ -1.17
CTNNA1-220ENST00000520260 NLRP13Q86W25 1043 aa7.74□□□□□ -1.17
CTNNA1-220ENST00000520260 ORAI2Q96SN7 254 aa7.74□□□□□ -1.17
CTNNA1-220ENST00000520260 CABP2Q9NPB3 220 aa7.74□□□□□ -1.17
CTNNA1-220ENST00000520260 SHPRHQ149N8 1683 aa7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 POLR3AO14802 1390 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 KTN1Q86UP2 1357 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 MMRN1Q13201 1228 aa7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 ZNF772Q68DY9 489 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 KCNH5Q8NCM2 988 aa7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 PMFBP1Q8TBY8 1022 aa7.73□□□□□ -1.17
CTNNA1-220ENST00000520260 COL16A1Q07092 1604 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-220ENST00000520260 ABTB2Q8N961 1025 aa7.72□□□□□ -1.17
CTNNA1-220ENST00000520260 CABP1Q9NZU7 370 aa7.72□□□□□ -1.17
CTNNA1-220ENST00000520260 ACEP12821 1306 aa7.72□□□□□ -1.17
CTNNA1-220ENST00000520260 SPATA31A3Q5VYP0 1347 aa7.72□□□□□ -1.17
CTNNA1-220ENST00000520260 ANKRD36BQ8N2N9 1353 aa7.71□□□□□ -1.17
CTNNA1-220ENST00000520260 EDC4Q6P2E9 1401 aaKnown RBP7.71□□□□□ -1.17
CTNNA1-220ENST00000520260 TOPAZ1Q8N9V7 1692 aa7.71□□□□□ -1.18
CTNNA1-220ENST00000520260 PXDNQ92626 1479 aa7.71□□□□□ -1.18
CTNNA1-220ENST00000520260 PHF12Q96QT6 1004 aa7.71□□□□□ -1.18
CTNNA1-220ENST00000520260 POLR3GLQ9BT43 218 aa7.71□□□□□ -1.18
CTNNA1-220ENST00000520260 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.18
CTNNA1-220ENST00000520260 USP6P35125 1406 aa7.7□□□□□ -1.18
CTNNA1-220ENST00000520260 HSPA5P11021 654 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-220ENST00000520260 NGLY1Q96IV0 654 aa7.7□□□□□ -1.18
CTNNA1-220ENST00000520260 CGNL1Q0VF96 1302 aa7.7□□□□□ -1.18
CTNNA1-220ENST00000520260 COL22A1Q8NFW1 1626 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-220ENST00000520260 NUTM2BA6NNL0 878 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 NUTM2EB1AL46 878 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 C7P10643 843 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 NUTM2AQ8IVF1 878 aaPredicted RBP7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 SLC39A7Q92504 469 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 COG3Q96JB2 828 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 TESK2Q96S53 571 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 SCUBE2Q9NQ36 999 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 PRR36Q9H6K5 1346 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 NSD2O96028 1365 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 DISP3Q9P2K9 1392 aa7.69□□□□□ -1.18
CTNNA1-220ENST00000520260 MED1Q15648 1581 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-220ENST00000520260 USP32Q8NFA0 1604 aa7.68□□□□□ -1.18
CTNNA1-220ENST00000520260 NLRP6P59044 892 aa7.68□□□□□ -1.18
CTNNA1-220ENST00000520260 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
CTNNA1-220ENST00000520260 ASTLQ6HA08 431 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms