RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 AKAP12Q02952 1782 aa16.57■□□□□ 0.24
HPS4-218ENST00000519774 LRP6O75581 1613 aa16.57■□□□□ 0.24
HPS4-218ENST00000519774 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
HPS4-218ENST00000519774 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
HPS4-218ENST00000519774 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
HPS4-218ENST00000519774 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
HPS4-218ENST00000519774 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
HPS4-218ENST00000519774 USP6P35125 1406 aa16.54■□□□□ 0.24
HPS4-218ENST00000519774 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
HPS4-218ENST00000519774 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
HPS4-218ENST00000519774 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
HPS4-218ENST00000519774 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
HPS4-218ENST00000519774 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
HPS4-218ENST00000519774 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
HPS4-218ENST00000519774 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
HPS4-218ENST00000519774 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
HPS4-218ENST00000519774 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
HPS4-218ENST00000519774 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
HPS4-218ENST00000519774 MYOM1P52179 1685 aa16.51■□□□□ 0.23
HPS4-218ENST00000519774 CD163L1Q9NR16 1453 aa16.51■□□□□ 0.23
HPS4-218ENST00000519774 HAP1P54257 671 aaPredicted RBP16.51■□□□□ 0.23
HPS4-218ENST00000519774 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
HPS4-218ENST00000519774 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
HPS4-218ENST00000519774 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
HPS4-218ENST00000519774 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
HPS4-218ENST00000519774 HDGFL2Q7Z4V5 671 aaPredicted RBP16.5■□□□□ 0.23
HPS4-218ENST00000519774 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
HPS4-218ENST00000519774 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
HPS4-218ENST00000519774 A0A1W2PP64 1363 aa16.5■□□□□ 0.23
HPS4-218ENST00000519774 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
HPS4-218ENST00000519774 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
HPS4-218ENST00000519774 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
HPS4-218ENST00000519774 CRYBG1Q9Y4K1 1723 aa16.48■□□□□ 0.23
HPS4-218ENST00000519774 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
HPS4-218ENST00000519774 PIK3C2AO00443 1686 aa16.47■□□□□ 0.23
HPS4-218ENST00000519774 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
HPS4-218ENST00000519774 TTC21BQ7Z4L5 1316 aa16.46■□□□□ 0.23
HPS4-218ENST00000519774 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
HPS4-218ENST00000519774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
HPS4-218ENST00000519774 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
HPS4-218ENST00000519774 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
HPS4-218ENST00000519774 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
HPS4-218ENST00000519774 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
HPS4-218ENST00000519774 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
HPS4-218ENST00000519774 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
HPS4-218ENST00000519774 NLRP6P59044 892 aa16.43■□□□□ 0.22
HPS4-218ENST00000519774 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
HPS4-218ENST00000519774 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
HPS4-218ENST00000519774 USP19O94966 1318 aa16.42■□□□□ 0.22
HPS4-218ENST00000519774 AFF2P51816 1311 aa16.42■□□□□ 0.22
HPS4-218ENST00000519774 KIF7Q2M1P5 1343 aa16.42■□□□□ 0.22
HPS4-218ENST00000519774 NME9Q86XW9 330 aa16.41■□□□□ 0.22
HPS4-218ENST00000519774 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
HPS4-218ENST00000519774 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
HPS4-218ENST00000519774 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
HPS4-218ENST00000519774 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
HPS4-218ENST00000519774 USP54Q70EL1 1684 aa16.39■□□□□ 0.21
HPS4-218ENST00000519774 SLIT3O75094 1523 aa16.39■□□□□ 0.21
HPS4-218ENST00000519774 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
HPS4-218ENST00000519774 SOX12O15370 315 aa16.38■□□□□ 0.21
HPS4-218ENST00000519774 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
HPS4-218ENST00000519774 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
HPS4-218ENST00000519774 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
HPS4-218ENST00000519774 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
HPS4-218ENST00000519774 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
HPS4-218ENST00000519774 CCDC7Q96M83 1385 aa16.37■□□□□ 0.21
HPS4-218ENST00000519774 GCP02774 474 aa16.36■□□□□ 0.21
HPS4-218ENST00000519774 ZNF772Q68DY9 489 aaPredicted RBP16.36■□□□□ 0.21
HPS4-218ENST00000519774 USP21Q9UK80 565 aa16.36■□□□□ 0.21
HPS4-218ENST00000519774 USP31Q70CQ4 1352 aa16.36■□□□□ 0.21
HPS4-218ENST00000519774 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 NWD2Q9ULI1 1742 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 WASHC2AQ641Q2 1341 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 OVOS2A0A0J9YW53 1432 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 OVOS2Q6IE36 1432 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 SLIT2O94813 1529 aa16.35■□□□□ 0.21
HPS4-218ENST00000519774 FAM83GA6ND36 823 aa16.34■□□□□ 0.21
HPS4-218ENST00000519774 POTEAQ6S8J7 498 aa16.34■□□□□ 0.21
HPS4-218ENST00000519774 FNBP4Q8N3X1 1017 aaPredicted RBP16.34■□□□□ 0.21
HPS4-218ENST00000519774 PANK3Q9H999 370 aa16.34■□□□□ 0.21
HPS4-218ENST00000519774 NFAT5O94916 1531 aa16.34■□□□□ 0.21
HPS4-218ENST00000519774 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
HPS4-218ENST00000519774 COG3Q96JB2 828 aa16.33■□□□□ 0.2
HPS4-218ENST00000519774 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
HPS4-218ENST00000519774 CPDO75976 1380 aa16.33■□□□□ 0.2
HPS4-218ENST00000519774 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
HPS4-218ENST00000519774 NRAPQ86VF7 1730 aa16.32■□□□□ 0.2
HPS4-218ENST00000519774 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
HPS4-218ENST00000519774 FYB1O15117 783 aa16.31■□□□□ 0.2
HPS4-218ENST00000519774 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
HPS4-218ENST00000519774 BTG4Q9NY30 223 aa16.31■□□□□ 0.2
HPS4-218ENST00000519774 LTN1O94822 1766 aa16.31■□□□□ 0.2
HPS4-218ENST00000519774 CGNL1Q0VF96 1302 aa16.3■□□□□ 0.2
HPS4-218ENST00000519774 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
HPS4-218ENST00000519774 ATRNO75882 1429 aa16.29■□□□□ 0.2
HPS4-218ENST00000519774 UNC5CLQ8IV45 518 aa16.29■□□□□ 0.2
HPS4-218ENST00000519774 TRPC5Q9UL62 973 aaPredicted RBP16.29■□□□□ 0.2
HPS4-218ENST00000519774 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
HPS4-218ENST00000519774 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms