RNA–Protein interactions for RNA: ENST00000519703.2

LINC01170-201, Transcript of long intergenic non-protein coding RNA 1170, humanhuman

TSL 5 BASIC

Gene LINC01170, Length 406 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01170-201ENST00000519703 ATAD2Q6PL18 1390 aa11.37□□□□□ -0.59
LINC01170-201ENST00000519703 PLEKHG3A1L390 1219 aa11.36□□□□□ -0.59
LINC01170-201ENST00000519703 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
LINC01170-201ENST00000519703 EIF4G2P78344 907 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC01170-201ENST00000519703 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
LINC01170-201ENST00000519703 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
LINC01170-201ENST00000519703 USP21Q9UK80 565 aa11.35□□□□□ -0.59
LINC01170-201ENST00000519703 RGPD8O14715 1765 aaPredicted RBP11.34□□□□□ -0.59
LINC01170-201ENST00000519703 SBNO2Q9Y2G9 1366 aa11.34□□□□□ -0.59
LINC01170-201ENST00000519703 CDCA8Q53HL2 280 aa11.34□□□□□ -0.59
LINC01170-201ENST00000519703 POTEAQ6S8J7 498 aa11.34□□□□□ -0.59
LINC01170-201ENST00000519703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01170-201ENST00000519703 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
LINC01170-201ENST00000519703 POLR3AO14802 1390 aaPredicted RBP11.33□□□□□ -0.6
LINC01170-201ENST00000519703 KTN1Q86UP2 1357 aaKnown RBP11.33□□□□□ -0.6
LINC01170-201ENST00000519703 ITSN1Q15811 1721 aa11.33□□□□□ -0.6
LINC01170-201ENST00000519703 SOX12O15370 315 aa11.33□□□□□ -0.6
LINC01170-201ENST00000519703 NLRP6P59044 892 aa11.33□□□□□ -0.6
LINC01170-201ENST00000519703 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
LINC01170-201ENST00000519703 SLC12A5Q9H2X9 1139 aa11.33□□□□□ -0.6
LINC01170-201ENST00000519703 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
LINC01170-201ENST00000519703 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
LINC01170-201ENST00000519703 RGS17Q9UGC6 210 aaPredicted RBP11.33□□□□□ -0.6
LINC01170-201ENST00000519703 NLRP13Q86W25 1043 aa11.32□□□□□ -0.6
LINC01170-201ENST00000519703 TESK2Q96S53 571 aa11.32□□□□□ -0.6
LINC01170-201ENST00000519703 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
LINC01170-201ENST00000519703 HSPA5P11021 654 aaKnown RBP11.31□□□□□ -0.6
LINC01170-201ENST00000519703 RXRBP28702 533 aa11.31□□□□□ -0.6
LINC01170-201ENST00000519703 ZC3H6P61129 1189 aaKnown RBP11.31□□□□□ -0.6
LINC01170-201ENST00000519703 USP6P35125 1406 aa11.3□□□□□ -0.6
LINC01170-201ENST00000519703 A0A0G2JS52 829 aa11.3□□□□□ -0.6
LINC01170-201ENST00000519703 MYT1Q01538 1121 aa11.3□□□□□ -0.6
LINC01170-201ENST00000519703 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
LINC01170-201ENST00000519703 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
LINC01170-201ENST00000519703 TTC21BQ7Z4L5 1316 aa11.29□□□□□ -0.6
LINC01170-201ENST00000519703 TOPAZ1Q8N9V7 1692 aa11.28□□□□□ -0.6
LINC01170-201ENST00000519703 STRN4Q9NRL3 753 aa11.28□□□□□ -0.6
LINC01170-201ENST00000519703 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
LINC01170-201ENST00000519703 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
LINC01170-201ENST00000519703 EVA1CP58658 441 aa11.27□□□□□ -0.61
LINC01170-201ENST00000519703 UNC5CLQ8IV45 518 aa11.27□□□□□ -0.61
LINC01170-201ENST00000519703 PUS7Q96PZ0 661 aaKnown RBP11.27□□□□□ -0.61
LINC01170-201ENST00000519703 BTG4Q9NY30 223 aa11.27□□□□□ -0.61
LINC01170-201ENST00000519703 TTC21AQ8NDW8 1320 aa11.27□□□□□ -0.61
LINC01170-201ENST00000519703 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
LINC01170-201ENST00000519703 GCP02774 474 aa11.26□□□□□ -0.61
LINC01170-201ENST00000519703 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
LINC01170-201ENST00000519703 NME9Q86XW9 330 aa11.26□□□□□ -0.61
LINC01170-201ENST00000519703 FNBP4Q8N3X1 1017 aaPredicted RBP11.26□□□□□ -0.61
LINC01170-201ENST00000519703 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
LINC01170-201ENST00000519703 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
LINC01170-201ENST00000519703 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
LINC01170-201ENST00000519703 TRPM3Q9HCF6 1732 aaPredicted RBP11.24□□□□□ -0.61
LINC01170-201ENST00000519703 KCNH5Q8NCM2 988 aa11.24□□□□□ -0.61
LINC01170-201ENST00000519703 USP35Q9P2H5 1018 aa11.24□□□□□ -0.61
LINC01170-201ENST00000519703 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
LINC01170-201ENST00000519703 CPSF1Q10570 1443 aaKnown RBP11.24□□□□□ -0.61
LINC01170-201ENST00000519703 SOCS7O14512 581 aa11.23□□□□□ -0.61
LINC01170-201ENST00000519703 COG3Q96JB2 828 aa11.23□□□□□ -0.61
LINC01170-201ENST00000519703 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
LINC01170-201ENST00000519703 EDC4Q6P2E9 1401 aaKnown RBP11.23□□□□□ -0.61
LINC01170-201ENST00000519703 USP19O94966 1318 aa11.22□□□□□ -0.61
LINC01170-201ENST00000519703 CSB-PGBD3P0DP91 1061 aa11.22□□□□□ -0.61
LINC01170-201ENST00000519703 ANKRD36BQ8N2N9 1353 aa11.22□□□□□ -0.61
LINC01170-201ENST00000519703 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
LINC01170-201ENST00000519703 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
LINC01170-201ENST00000519703 BCL9LQ86UU0 1499 aa11.21□□□□□ -0.61
LINC01170-201ENST00000519703 VPS72Q15906 364 aa11.21□□□□□ -0.61
LINC01170-201ENST00000519703 GGNBP2Q9H3C7 697 aa11.21□□□□□ -0.61
LINC01170-201ENST00000519703 SLIT2O94813 1529 aa11.19□□□□□ -0.62
LINC01170-201ENST00000519703 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
LINC01170-201ENST00000519703 ATRNO75882 1429 aa11.19□□□□□ -0.62
LINC01170-201ENST00000519703 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
LINC01170-201ENST00000519703 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
LINC01170-201ENST00000519703 NSD3Q9BZ95 1437 aa11.18□□□□□ -0.62
LINC01170-201ENST00000519703 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
LINC01170-201ENST00000519703 CNGB1Q14028 1251 aaPredicted RBP11.18□□□□□ -0.62
LINC01170-201ENST00000519703 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
LINC01170-201ENST00000519703 CPDO75976 1380 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 CGNL1Q0VF96 1302 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 NRKQ7Z2Y5 1582 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 AMPHP49418 695 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
LINC01170-201ENST00000519703 SEPT12Q8IYM1 358 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 PANK3Q9H999 370 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 ABCA3Q99758 1704 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 RGS12O14924 1447 aa11.17□□□□□ -0.62
LINC01170-201ENST00000519703 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
LINC01170-201ENST00000519703 COL14A1Q05707 1796 aaKnown RBP11.16□□□□□ -0.62
LINC01170-201ENST00000519703 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
LINC01170-201ENST00000519703 TNNT2P45379 298 aaPredicted RBP11.16□□□□□ -0.62
LINC01170-201ENST00000519703 ARHGEF25Q86VW2 580 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
LINC01170-201ENST00000519703 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 PIK3C2AO00443 1686 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 AATKQ6ZMQ8 1374 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
LINC01170-201ENST00000519703 MARF1Q9Y4F3 1742 aaKnown RBP11.15□□□□□ -0.62
LINC01170-201ENST00000519703 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms