RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 ATRNO75882 1429 aa13.18□□□□□ -0.3
VNN3-212ENST00000519686 ANKARQ7Z5J8 1434 aa13.18□□□□□ -0.3
VNN3-212ENST00000519686 MINK1Q8N4C8 1332 aaPredicted RBP13.17□□□□□ -0.3
VNN3-212ENST00000519686 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
VNN3-212ENST00000519686 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
VNN3-212ENST00000519686 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
VNN3-212ENST00000519686 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
VNN3-212ENST00000519686 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
VNN3-212ENST00000519686 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
VNN3-212ENST00000519686 GPRASP1Q5JY77 1395 aa13.15□□□□□ -0.3
VNN3-212ENST00000519686 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
VNN3-212ENST00000519686 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
VNN3-212ENST00000519686 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
VNN3-212ENST00000519686 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
VNN3-212ENST00000519686 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
VNN3-212ENST00000519686 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
VNN3-212ENST00000519686 ARHGEF28Q8N1W1 1705 aaKnown RBP13.12□□□□□ -0.31
VNN3-212ENST00000519686 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
VNN3-212ENST00000519686 SLIT2O94813 1529 aa13.12□□□□□ -0.31
VNN3-212ENST00000519686 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
VNN3-212ENST00000519686 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
VNN3-212ENST00000519686 PLCH1Q4KWH8 1693 aa13.11□□□□□ -0.31
VNN3-212ENST00000519686 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
VNN3-212ENST00000519686 PAK3O75914 559 aaPredicted RBP13.1□□□□□ -0.31
VNN3-212ENST00000519686 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
VNN3-212ENST00000519686 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
VNN3-212ENST00000519686 PROM2Q8N271 834 aa13.09□□□□□ -0.31
VNN3-212ENST00000519686 TRPM3Q9HCF6 1732 aaPredicted RBP13.09□□□□□ -0.31
VNN3-212ENST00000519686 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
VNN3-212ENST00000519686 KIAA1210Q9ULL0 1709 aa13.09□□□□□ -0.31
VNN3-212ENST00000519686 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
VNN3-212ENST00000519686 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
VNN3-212ENST00000519686 ALS2Q96Q42 1657 aa13.07□□□□□ -0.32
VNN3-212ENST00000519686 GLI3P10071 1580 aa13.07□□□□□ -0.32
VNN3-212ENST00000519686 VPS72Q15906 364 aa13.07□□□□□ -0.32
VNN3-212ENST00000519686 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
VNN3-212ENST00000519686 ATP7BP35670 1465 aa13.06□□□□□ -0.32
VNN3-212ENST00000519686 A0A0G2JS52 829 aa13.06□□□□□ -0.32
VNN3-212ENST00000519686 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
VNN3-212ENST00000519686 MYT1Q01538 1121 aa13.06□□□□□ -0.32
VNN3-212ENST00000519686 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
VNN3-212ENST00000519686 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
VNN3-212ENST00000519686 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
VNN3-212ENST00000519686 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
VNN3-212ENST00000519686 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
VNN3-212ENST00000519686 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
VNN3-212ENST00000519686 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
VNN3-212ENST00000519686 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
VNN3-212ENST00000519686 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.32
VNN3-212ENST00000519686 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
VNN3-212ENST00000519686 PRDM11Q9NQV5 511 aa13.02□□□□□ -0.33
VNN3-212ENST00000519686 ACEP12821 1306 aa13.02□□□□□ -0.33
VNN3-212ENST00000519686 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.33
VNN3-212ENST00000519686 NRAPQ86VF7 1730 aa13.02□□□□□ -0.33
VNN3-212ENST00000519686 EP400Q96L91 3159 aa13.01□□□□□ -0.33
VNN3-212ENST00000519686 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
VNN3-212ENST00000519686 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
VNN3-212ENST00000519686 QRICH2Q9H0J4 1663 aa13□□□□□ -0.33
VNN3-212ENST00000519686 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
VNN3-212ENST00000519686 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
VNN3-212ENST00000519686 NEUROD1Q13562 356 aa13□□□□□ -0.33
VNN3-212ENST00000519686 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
VNN3-212ENST00000519686 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
VNN3-212ENST00000519686 L3MBTL2Q969R5 705 aa13□□□□□ -0.33
VNN3-212ENST00000519686 ONECUT3O60422 494 aaPredicted RBP12.99□□□□□ -0.33
VNN3-212ENST00000519686 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
VNN3-212ENST00000519686 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
VNN3-212ENST00000519686 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
VNN3-212ENST00000519686 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
VNN3-212ENST00000519686 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
VNN3-212ENST00000519686 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
VNN3-212ENST00000519686 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
VNN3-212ENST00000519686 KIAA0232Q92628 1395 aa12.97□□□□□ -0.33
VNN3-212ENST00000519686 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
VNN3-212ENST00000519686 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
VNN3-212ENST00000519686 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
VNN3-212ENST00000519686 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
VNN3-212ENST00000519686 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
VNN3-212ENST00000519686 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
VNN3-212ENST00000519686 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
VNN3-212ENST00000519686 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
VNN3-212ENST00000519686 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
VNN3-212ENST00000519686 CHRNA2Q15822 529 aa12.96□□□□□ -0.33
VNN3-212ENST00000519686 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
VNN3-212ENST00000519686 EVA1CP58658 441 aa12.95□□□□□ -0.34
VNN3-212ENST00000519686 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
VNN3-212ENST00000519686 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
VNN3-212ENST00000519686 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
VNN3-212ENST00000519686 NRKQ7Z2Y5 1582 aa12.93□□□□□ -0.34
VNN3-212ENST00000519686 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
VNN3-212ENST00000519686 CABP1Q9NZU7 370 aa12.93□□□□□ -0.34
VNN3-212ENST00000519686 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
VNN3-212ENST00000519686 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
VNN3-212ENST00000519686 BAG6P46379 1132 aa12.92□□□□□ -0.34
VNN3-212ENST00000519686 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
VNN3-212ENST00000519686 USP19O94966 1318 aa12.91□□□□□ -0.34
VNN3-212ENST00000519686 USP6P35125 1406 aa12.91□□□□□ -0.34
VNN3-212ENST00000519686 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
VNN3-212ENST00000519686 GCP02774 474 aa12.91□□□□□ -0.34
VNN3-212ENST00000519686 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms