RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 EMILIN1Q9Y6C2 1016 aa23.47■■□□□ 1.35
CSGALNACT1-207ENST00000519222 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
CSGALNACT1-207ENST00000519222 MED14O60244 1454 aa23.45■■□□□ 1.35
CSGALNACT1-207ENST00000519222 FER1L4A9Z1Z3 1794 aa23.45■■□□□ 1.34
CSGALNACT1-207ENST00000519222 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
CSGALNACT1-207ENST00000519222 PHF23Q9BUL5 403 aaPredicted RBP23.44■■□□□ 1.34
CSGALNACT1-207ENST00000519222 CPS1P31327 1500 aa23.44■■□□□ 1.34
CSGALNACT1-207ENST00000519222 RRS1Q15050 365 aaKnown RBP23.43■■□□□ 1.34
CSGALNACT1-207ENST00000519222 TBX22Q9Y458 520 aa23.43■■□□□ 1.34
CSGALNACT1-207ENST00000519222 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
CSGALNACT1-207ENST00000519222 IQSEC2Q5JU85 1478 aa23.43■■□□□ 1.34
CSGALNACT1-207ENST00000519222 COG3Q96JB2 828 aa23.42■■□□□ 1.34
CSGALNACT1-207ENST00000519222 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
CSGALNACT1-207ENST00000519222 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
CSGALNACT1-207ENST00000519222 ACEP12821 1306 aa23.41■■□□□ 1.34
CSGALNACT1-207ENST00000519222 ARHGAP23Q9P227 1491 aa23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 MAPK8IP3Q9UPT6 1336 aa23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 HMOX1P09601 288 aa23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 WDR63Q8IWG1 891 aa23.4■■□□□ 1.34
CSGALNACT1-207ENST00000519222 SLIT1O75093 1534 aa23.39■■□□□ 1.34
CSGALNACT1-207ENST00000519222 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.33
CSGALNACT1-207ENST00000519222 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.38■■□□□ 1.33
CSGALNACT1-207ENST00000519222 CCDC27Q2M243 656 aa23.38■■□□□ 1.33
CSGALNACT1-207ENST00000519222 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
CSGALNACT1-207ENST00000519222 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
CSGALNACT1-207ENST00000519222 SOX12O15370 315 aa23.37■■□□□ 1.33
CSGALNACT1-207ENST00000519222 KCNA6P17658 529 aa23.37■■□□□ 1.33
CSGALNACT1-207ENST00000519222 RBM33Q96EV2 1170 aaKnown RBP23.37■■□□□ 1.33
CSGALNACT1-207ENST00000519222 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
CSGALNACT1-207ENST00000519222 BCL2L13Q9BXK5 485 aa23.36■■□□□ 1.33
CSGALNACT1-207ENST00000519222 RIPK4P57078 832 aa23.36■■□□□ 1.33
CSGALNACT1-207ENST00000519222 TRIM35Q9UPQ4 493 aa23.36■■□□□ 1.33
CSGALNACT1-207ENST00000519222 SKAP1Q86WV1 359 aa23.35■■□□□ 1.33
CSGALNACT1-207ENST00000519222 FRAT1Q92837 279 aaPredicted RBP23.35■■□□□ 1.33
CSGALNACT1-207ENST00000519222 PRKAR2BP31323 418 aa23.35■■□□□ 1.33
CSGALNACT1-207ENST00000519222 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
CSGALNACT1-207ENST00000519222 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
CSGALNACT1-207ENST00000519222 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
CSGALNACT1-207ENST00000519222 ANKRD26Q9UPS8 1709 aa23.33■■□□□ 1.33
CSGALNACT1-207ENST00000519222 PLEKHG3A1L390 1219 aa23.32■■□□□ 1.32
CSGALNACT1-207ENST00000519222 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
CSGALNACT1-207ENST00000519222 PHACTR3Q96KR7 559 aa23.32■■□□□ 1.32
CSGALNACT1-207ENST00000519222 FCHSD2O94868 740 aa23.32■■□□□ 1.32
CSGALNACT1-207ENST00000519222 RSPH6AQ9H0K4 717 aa23.32■■□□□ 1.32
CSGALNACT1-207ENST00000519222 RARSP54136 660 aaKnown RBP23.31■■□□□ 1.32
CSGALNACT1-207ENST00000519222 IL13P35225 146 aa23.3■■□□□ 1.32
CSGALNACT1-207ENST00000519222 MYH16Q9H6N6 1097 aa23.3■■□□□ 1.32
CSGALNACT1-207ENST00000519222 NGDNQ8NEJ9 315 aaKnown RBP23.29■■□□□ 1.32
CSGALNACT1-207ENST00000519222 PANK1Q8TE04 598 aa23.29■■□□□ 1.32
CSGALNACT1-207ENST00000519222 ANKLE2Q86XL3 938 aa23.29■■□□□ 1.32
CSGALNACT1-207ENST00000519222 RIMS1Q86UR5 1692 aaKnown RBP23.27■■□□□ 1.32
CSGALNACT1-207ENST00000519222 FANCIQ9NVI1 1328 aa23.27■■□□□ 1.32
CSGALNACT1-207ENST00000519222 TNNQ9UQP3 1299 aa23.27■■□□□ 1.32
CSGALNACT1-207ENST00000519222 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
CSGALNACT1-207ENST00000519222 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
CSGALNACT1-207ENST00000519222 EXOSC9Q06265 439 aaKnown RBP23.26■■□□□ 1.31
CSGALNACT1-207ENST00000519222 COG6Q9Y2V7 657 aa23.26■■□□□ 1.31
CSGALNACT1-207ENST00000519222 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 USP6P35125 1406 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 THUMPD2Q9BTF0 503 aaKnown RBP23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 PTCH1Q13635 1447 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 NEFMP07197 916 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
CSGALNACT1-207ENST00000519222 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
CSGALNACT1-207ENST00000519222 LAS1LQ9Y4W2 734 aaKnown RBP23.24■■□□□ 1.31
CSGALNACT1-207ENST00000519222 CLUAP1Q96AJ1 413 aa23.23■■□□□ 1.31
CSGALNACT1-207ENST00000519222 MAP2P11137 1827 aaKnown RBP23.23■■□□□ 1.31
CSGALNACT1-207ENST00000519222 NUTM2GQ5VZR2 741 aa23.22■■□□□ 1.31
CSGALNACT1-207ENST00000519222 HSP90AB2PQ58FF8 381 aa23.22■■□□□ 1.31
CSGALNACT1-207ENST00000519222 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
CSGALNACT1-207ENST00000519222 MON2Q7Z3U7 1717 aa23.21■■□□□ 1.31
CSGALNACT1-207ENST00000519222 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
CSGALNACT1-207ENST00000519222 RLBP1P12271 317 aa23.2■■□□□ 1.3
CSGALNACT1-207ENST00000519222 EIF4A2Q14240 407 aaKnown RBP23.2■■□□□ 1.3
CSGALNACT1-207ENST00000519222 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
CSGALNACT1-207ENST00000519222 CDK12Q9NYV4 1490 aaPredicted RBP23.19■■□□□ 1.3
CSGALNACT1-207ENST00000519222 NFE2L2Q16236 605 aa23.19■■□□□ 1.3
CSGALNACT1-207ENST00000519222 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
CSGALNACT1-207ENST00000519222 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
CSGALNACT1-207ENST00000519222 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
CSGALNACT1-207ENST00000519222 DIP2AQ14689 1571 aa23.17■■□□□ 1.3
CSGALNACT1-207ENST00000519222 SULT6B1Q6IMI4 303 aa23.17■■□□□ 1.3
CSGALNACT1-207ENST00000519222 OVOS2A0A0J9YW53 1432 aa23.16■■□□□ 1.3
CSGALNACT1-207ENST00000519222 OVOS2Q6IE36 1432 aa23.16■■□□□ 1.3
CSGALNACT1-207ENST00000519222 FAM83GA6ND36 823 aa23.16■■□□□ 1.3
CSGALNACT1-207ENST00000519222 PAK3O75914 559 aaPredicted RBP23.16■■□□□ 1.3
CSGALNACT1-207ENST00000519222 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
CSGALNACT1-207ENST00000519222 SSH2Q76I76 1423 aa23.15■■□□□ 1.3
CSGALNACT1-207ENST00000519222 NLRP6P59044 892 aa23.15■■□□□ 1.3
CSGALNACT1-207ENST00000519222 DCTN1Q14203 1278 aa23.15■■□□□ 1.3
CSGALNACT1-207ENST00000519222 SSH1Q8WYL5 1049 aa23.14■■□□□ 1.3
CSGALNACT1-207ENST00000519222 TOPAZ1Q8N9V7 1692 aa23.14■■□□□ 1.3
CSGALNACT1-207ENST00000519222 CENPQQ7L2Z9 268 aaPredicted RBP23.14■■□□□ 1.29
CSGALNACT1-207ENST00000519222 IL16Q14005 1332 aa23.13■■□□□ 1.29
CSGALNACT1-207ENST00000519222 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
CSGALNACT1-207ENST00000519222 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
CSGALNACT1-207ENST00000519222 MAP3K19Q56UN5 1328 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms