RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 PCDHB15Q9Y5E8 787 aa9.83□□□□□ -0.84
HDAC2-204ENST00000518756 TERTO14746 1132 aaKnown RBP9.82□□□□□ -0.84
HDAC2-204ENST00000518756 GJA5P36382 358 aa9.82□□□□□ -0.84
HDAC2-204ENST00000518756 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
HDAC2-204ENST00000518756 CFAP99D6REC4 459 aa9.81□□□□□ -0.84
HDAC2-204ENST00000518756 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
HDAC2-204ENST00000518756 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
HDAC2-204ENST00000518756 VARSP26640 1264 aaKnown RBP9.8□□□□□ -0.84
HDAC2-204ENST00000518756 SPTLC1O15269 473 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 HRCP23327 699 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 NNTQ13423 1086 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 TRIM46Q7Z4K8 759 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 TSC1Q92574 1164 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 MAP10Q9P2G4 905 aa9.79□□□□□ -0.84
HDAC2-204ENST00000518756 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
HDAC2-204ENST00000518756 INSM1Q01101 510 aaPredicted RBP9.76□□□□□ -0.85
HDAC2-204ENST00000518756 AGERQ15109 404 aa9.76□□□□□ -0.85
HDAC2-204ENST00000518756 PRPF38BQ5VTL8 546 aaKnown RBP9.76□□□□□ -0.85
HDAC2-204ENST00000518756 FAM174AQ8TBP5 190 aa9.76□□□□□ -0.85
HDAC2-204ENST00000518756 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
HDAC2-204ENST00000518756 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
HDAC2-204ENST00000518756 WIPF1O43516 503 aa9.75□□□□□ -0.85
HDAC2-204ENST00000518756 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
HDAC2-204ENST00000518756 LCE2CQ5TA81 110 aa9.75□□□□□ -0.85
HDAC2-204ENST00000518756 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
HDAC2-204ENST00000518756 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
HDAC2-204ENST00000518756 FOXJ1Q92949 421 aa9.75□□□□□ -0.85
HDAC2-204ENST00000518756 F12P00748 615 aaPredicted RBP9.74□□□□□ -0.85
HDAC2-204ENST00000518756 WDR4P57081 412 aaKnown RBP9.74□□□□□ -0.85
HDAC2-204ENST00000518756 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
HDAC2-204ENST00000518756 ADH1CP00326 375 aa9.73□□□□□ -0.85
HDAC2-204ENST00000518756 MYSM1Q5VVJ2 828 aa9.73□□□□□ -0.85
HDAC2-204ENST00000518756 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
HDAC2-204ENST00000518756 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
HDAC2-204ENST00000518756 NXF1Q9UBU9 619 aaKnown RBP9.73□□□□□ -0.85
HDAC2-204ENST00000518756 LIMD1Q9UGP4 676 aa9.73□□□□□ -0.85
HDAC2-204ENST00000518756 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
HDAC2-204ENST00000518756 QPCTQ16769 361 aa9.72□□□□□ -0.85
HDAC2-204ENST00000518756 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
HDAC2-204ENST00000518756 STK17AQ9UEE5 414 aa9.72□□□□□ -0.85
HDAC2-204ENST00000518756 TIMP2P16035 220 aa9.71□□□□□ -0.86
HDAC2-204ENST00000518756 VEGFBP49765 207 aa9.71□□□□□ -0.86
HDAC2-204ENST00000518756 SCARF1Q14162 830 aa9.71□□□□□ -0.86
HDAC2-204ENST00000518756 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
HDAC2-204ENST00000518756 MPNDQ8N594 471 aa9.71□□□□□ -0.86
HDAC2-204ENST00000518756 PURBQ96QR8 312 aaKnown RBP9.7□□□□□ -0.86
HDAC2-204ENST00000518756 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
HDAC2-204ENST00000518756 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
HDAC2-204ENST00000518756 RSPH6AQ9H0K4 717 aa9.69□□□□□ -0.86
HDAC2-204ENST00000518756 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
HDAC2-204ENST00000518756 C4orf48Q5BLP8 95 aa9.67□□□□□ -0.86
HDAC2-204ENST00000518756 LILRB3O75022 631 aa9.66□□□□□ -0.86
HDAC2-204ENST00000518756 ZIC2O95409 532 aaPredicted RBP9.66□□□□□ -0.86
HDAC2-204ENST00000518756 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
HDAC2-204ENST00000518756 IRF7Q92985 503 aa9.66□□□□□ -0.86
HDAC2-204ENST00000518756 CDK15Q96Q40 435 aa9.66□□□□□ -0.86
HDAC2-204ENST00000518756 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
HDAC2-204ENST00000518756 SOBPA7XYQ1 873 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 NR3C2P08235 984 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 GMPRP36959 345 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 C6orf118Q5T5N4 469 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 NBPF14Q5TI25 921 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 ARMC2Q8NEN0 867 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 ITPKCQ96DU7 683 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 FAM117AQ9C073 453 aa9.65□□□□□ -0.86
HDAC2-204ENST00000518756 MAGEB6P1A0A0J9YX57 407 aa9.64□□□□□ -0.87
HDAC2-204ENST00000518756 H3BM21 787 aa9.64□□□□□ -0.87
HDAC2-204ENST00000518756 NR5A1Q13285 461 aa9.64□□□□□ -0.87
HDAC2-204ENST00000518756 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
HDAC2-204ENST00000518756 NPAS3Q8IXF0 933 aa9.64□□□□□ -0.87
HDAC2-204ENST00000518756 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
HDAC2-204ENST00000518756 FSHRP23945 695 aa9.63□□□□□ -0.87
HDAC2-204ENST00000518756 POLR3EQ9NVU0 708 aa9.63□□□□□ -0.87
HDAC2-204ENST00000518756 CARD14Q9BXL6 1004 aa9.62□□□□□ -0.87
HDAC2-204ENST00000518756 MAN1A2O60476 641 aa9.61□□□□□ -0.87
HDAC2-204ENST00000518756 UPP2O95045 317 aa9.61□□□□□ -0.87
HDAC2-204ENST00000518756 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
HDAC2-204ENST00000518756 SH3D19Q5HYK7 790 aa9.61□□□□□ -0.87
HDAC2-204ENST00000518756 VASH1Q7L8A9 365 aaPredicted RBP9.61□□□□□ -0.87
HDAC2-204ENST00000518756 ERBB4Q15303 1308 aa9.6□□□□□ -0.87
HDAC2-204ENST00000518756 BMP2P12643 396 aa9.6□□□□□ -0.87
HDAC2-204ENST00000518756 GRM5P41594 1212 aa9.6□□□□□ -0.87
HDAC2-204ENST00000518756 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
HDAC2-204ENST00000518756 SH3RF1Q7Z6J0 888 aa9.59□□□□□ -0.87
HDAC2-204ENST00000518756 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
HDAC2-204ENST00000518756 FAM181BA6NEQ2 426 aa9.58□□□□□ -0.88
HDAC2-204ENST00000518756 SH3BP5LQ7L8J4 393 aa9.58□□□□□ -0.88
HDAC2-204ENST00000518756 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
HDAC2-204ENST00000518756 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
HDAC2-204ENST00000518756 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
HDAC2-204ENST00000518756 MEIOBQ8N635 442 aa9.57□□□□□ -0.88
HDAC2-204ENST00000518756 ZSCAN1Q8NBB4 408 aa9.57□□□□□ -0.88
HDAC2-204ENST00000518756 MAP4K5Q9Y4K4 846 aa9.57□□□□□ -0.88
HDAC2-204ENST00000518756 CTDSPL2Q05D32 466 aa9.55□□□□□ -0.88
HDAC2-204ENST00000518756 TRMT44Q8IYL2 757 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms