RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 SGIP1Q9BQI5 828 aa8.63□□□□□ -1.03
SPIDR-208ENST00000518711 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
SPIDR-208ENST00000518711 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
SPIDR-208ENST00000518711 MTFR1LQ9H019 292 aa8.61□□□□□ -1.03
SPIDR-208ENST00000518711 ANO8Q9HCE9 1232 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-208ENST00000518711 TOMM70O94826 608 aa8.6□□□□□ -1.03
SPIDR-208ENST00000518711 SIRT1Q96EB6 747 aa8.6□□□□□ -1.03
SPIDR-208ENST00000518711 NEXMIFQ5QGS0 1516 aa8.59□□□□□ -1.03
SPIDR-208ENST00000518711 ESCO1Q5FWF5 840 aa8.59□□□□□ -1.03
SPIDR-208ENST00000518711 NALCNQ8IZF0 1738 aa8.59□□□□□ -1.03
SPIDR-208ENST00000518711 WDR90Q96KV7 1748 aa8.59□□□□□ -1.03
SPIDR-208ENST00000518711 PXDNQ92626 1479 aa8.58□□□□□ -1.04
SPIDR-208ENST00000518711 USP19O94966 1318 aa8.58□□□□□ -1.04
SPIDR-208ENST00000518711 FOXO3O43524 673 aa8.58□□□□□ -1.04
SPIDR-208ENST00000518711 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-208ENST00000518711 SPATA31A3Q5VYP0 1347 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 TECPR2O15040 1411 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 PCNTO95613 3336 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 RGS19P49795 217 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 ADCY9O60503 1353 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 ABCC11Q96J66 1382 aa8.57□□□□□ -1.04
SPIDR-208ENST00000518711 CDC42BPGQ6DT37 1551 aa8.56□□□□□ -1.04
SPIDR-208ENST00000518711 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
SPIDR-208ENST00000518711 XPCQ01831 940 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-208ENST00000518711 PSME1Q06323 249 aa8.56□□□□□ -1.04
SPIDR-208ENST00000518711 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
SPIDR-208ENST00000518711 CCDC144AA2RUR9 1427 aa8.55□□□□□ -1.04
SPIDR-208ENST00000518711 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
SPIDR-208ENST00000518711 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 NWD2Q9ULI1 1742 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 KIF1BO60333 1816 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 SBNO1A3KN83 1393 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 MSH5O43196 834 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 KIAA1210Q9ULL0 1709 aa8.54□□□□□ -1.04
SPIDR-208ENST00000518711 ARHGEF10O15013 1369 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 KRT28Q7Z3Y7 464 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 ABHD8Q96I13 439 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 NAIPQ13075 1403 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 SPATA31A5Q5VU36 1347 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 SPATA31A7Q8IWB4 1347 aa8.53□□□□□ -1.04
SPIDR-208ENST00000518711 PLSCR1O15162 318 aa8.52□□□□□ -1.05
SPIDR-208ENST00000518711 STK32BQ9NY57 414 aa8.52□□□□□ -1.05
SPIDR-208ENST00000518711 PLCH1Q4KWH8 1693 aa8.52□□□□□ -1.05
SPIDR-208ENST00000518711 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
SPIDR-208ENST00000518711 THSD7AQ9UPZ6 1657 aa8.51□□□□□ -1.05
SPIDR-208ENST00000518711 NLGN2Q8NFZ4 835 aa8.51□□□□□ -1.05
SPIDR-208ENST00000518711 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
SPIDR-208ENST00000518711 SLC4A1APQ9BWU0 796 aaKnown RBP8.51□□□□□ -1.05
SPIDR-208ENST00000518711 BTG4Q9NY30 223 aa8.51□□□□□ -1.05
SPIDR-208ENST00000518711 PDE3BQ13370 1112 aa8.5□□□□□ -1.05
SPIDR-208ENST00000518711 SLC15A2Q16348 729 aa8.5□□□□□ -1.05
SPIDR-208ENST00000518711 PRDM10Q9NQV6 1147 aa8.5□□□□□ -1.05
SPIDR-208ENST00000518711 PHF8Q9UPP1 1060 aa8.5□□□□□ -1.05
SPIDR-208ENST00000518711 KIF1AQ12756 1690 aa8.49□□□□□ -1.05
SPIDR-208ENST00000518711 TNS3Q68CZ2 1445 aa8.49□□□□□ -1.05
SPIDR-208ENST00000518711 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
SPIDR-208ENST00000518711 RBM46Q8TBY0 533 aaKnown RBP8.49□□□□□ -1.05
SPIDR-208ENST00000518711 PPLO60437 1756 aa8.48□□□□□ -1.05
SPIDR-208ENST00000518711 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
SPIDR-208ENST00000518711 CCDC85CA6NKD9 419 aa8.48□□□□□ -1.05
SPIDR-208ENST00000518711 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
SPIDR-208ENST00000518711 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
SPIDR-208ENST00000518711 C14orf93Q9H972 538 aaKnown RBP8.48□□□□□ -1.05
SPIDR-208ENST00000518711 ADGRF5Q8IZF2 1346 aa8.48□□□□□ -1.05
SPIDR-208ENST00000518711 FSTL1Q12841 308 aa8.47□□□□□ -1.05
SPIDR-208ENST00000518711 PROM2Q8N271 834 aa8.47□□□□□ -1.05
SPIDR-208ENST00000518711 SPATA31E1Q6ZUB1 1445 aa8.46□□□□□ -1.05
SPIDR-208ENST00000518711 ANKARQ7Z5J8 1434 aa8.46□□□□□ -1.05
SPIDR-208ENST00000518711 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.05
SPIDR-208ENST00000518711 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
SPIDR-208ENST00000518711 ITGAEP38570 1179 aa8.46□□□□□ -1.06
SPIDR-208ENST00000518711 STK26Q9P289 416 aa8.46□□□□□ -1.06
SPIDR-208ENST00000518711 FMN2Q9NZ56 1722 aa8.46□□□□□ -1.06
SPIDR-208ENST00000518711 PIK3C2GO75747 1445 aa8.46□□□□□ -1.06
SPIDR-208ENST00000518711 PDE4DIPQ5VU43 2346 aa8.45□□□□□ -1.06
SPIDR-208ENST00000518711 DLL1O00548 723 aa8.45□□□□□ -1.06
SPIDR-208ENST00000518711 POLD1P28340 1107 aa8.45□□□□□ -1.06
SPIDR-208ENST00000518711 STAC3Q96MF2 364 aa8.45□□□□□ -1.06
SPIDR-208ENST00000518711 KNDC1Q76NI1 1749 aa8.45□□□□□ -1.06
SPIDR-208ENST00000518711 DHX57Q6P158 1386 aaKnown RBP8.45□□□□□ -1.06
SPIDR-208ENST00000518711 NRAPQ86VF7 1730 aa8.44□□□□□ -1.06
SPIDR-208ENST00000518711 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
SPIDR-208ENST00000518711 FOXN1O15353 648 aa8.44□□□□□ -1.06
SPIDR-208ENST00000518711 C16orf71Q8IYS4 520 aaPredicted RBP8.44□□□□□ -1.06
SPIDR-208ENST00000518711 EIF3AQ14152 1382 aaKnown RBP8.44□□□□□ -1.06
SPIDR-208ENST00000518711 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
SPIDR-208ENST00000518711 PLEKHH1Q9ULM0 1364 aa8.44□□□□□ -1.06
SPIDR-208ENST00000518711 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
SPIDR-208ENST00000518711 TMEM132EQ6IEE7 984 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 CNKSR2Q8WXI2 1034 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 NMRK2Q9NPI5 230 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 SPATA31A1Q5TZJ5 1347 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 RGPD3A6NKT7 1758 aaPredicted RBP8.43□□□□□ -1.06
SPIDR-208ENST00000518711 RGPD4Q7Z3J3 1758 aa8.43□□□□□ -1.06
SPIDR-208ENST00000518711 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
SPIDR-208ENST00000518711 CTCFP49711 727 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms