RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 NUTM2AQ8IVF1 878 aaPredicted RBP15.61■□□□□ 0.09
TRIM55-205ENST00000517647 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
TRIM55-205ENST00000517647 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
TRIM55-205ENST00000517647 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
TRIM55-205ENST00000517647 ATAD2Q6PL18 1390 aa15.59■□□□□ 0.09
TRIM55-205ENST00000517647 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
TRIM55-205ENST00000517647 ACEP12821 1306 aa15.58■□□□□ 0.08
TRIM55-205ENST00000517647 AFF2P51816 1311 aa15.58■□□□□ 0.08
TRIM55-205ENST00000517647 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
TRIM55-205ENST00000517647 NGLY1Q96IV0 654 aa15.56■□□□□ 0.08
TRIM55-205ENST00000517647 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
TRIM55-205ENST00000517647 SLIT2O94813 1529 aa15.56■□□□□ 0.08
TRIM55-205ENST00000517647 SSH2Q76I76 1423 aa15.55■□□□□ 0.08
TRIM55-205ENST00000517647 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
TRIM55-205ENST00000517647 TESK2Q96S53 571 aa15.55■□□□□ 0.08
TRIM55-205ENST00000517647 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
TRIM55-205ENST00000517647 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
TRIM55-205ENST00000517647 ADAMTS2O95450 1211 aa15.54■□□□□ 0.08
TRIM55-205ENST00000517647 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.54■□□□□ 0.08
TRIM55-205ENST00000517647 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
TRIM55-205ENST00000517647 ATRNO75882 1429 aa15.53■□□□□ 0.08
TRIM55-205ENST00000517647 USP6P35125 1406 aa15.53■□□□□ 0.08
TRIM55-205ENST00000517647 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
TRIM55-205ENST00000517647 CABP1Q9NZU7 370 aa15.53■□□□□ 0.08
TRIM55-205ENST00000517647 CRYBG1Q9Y4K1 1723 aa15.53■□□□□ 0.08
TRIM55-205ENST00000517647 RXRBP28702 533 aa15.52■□□□□ 0.08
TRIM55-205ENST00000517647 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
TRIM55-205ENST00000517647 TRPC5Q9UL62 973 aaPredicted RBP15.52■□□□□ 0.08
TRIM55-205ENST00000517647 NINLQ9Y2I6 1382 aa15.51■□□□□ 0.07
TRIM55-205ENST00000517647 USP19O94966 1318 aa15.51■□□□□ 0.07
TRIM55-205ENST00000517647 CCER1Q8TC90 406 aaPredicted RBP15.51■□□□□ 0.07
TRIM55-205ENST00000517647 QTRT2Q9H974 415 aaKnown RBP15.51■□□□□ 0.07
TRIM55-205ENST00000517647 USP21Q9UK80 565 aa15.51■□□□□ 0.07
TRIM55-205ENST00000517647 NWD2Q9ULI1 1742 aa15.51■□□□□ 0.07
TRIM55-205ENST00000517647 ST20-MTHFSA0A0A6YYL1 179 aa15.5■□□□□ 0.07
TRIM55-205ENST00000517647 USP47Q96K76 1375 aa15.49■□□□□ 0.07
TRIM55-205ENST00000517647 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
TRIM55-205ENST00000517647 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
TRIM55-205ENST00000517647 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 AKAP12Q02952 1782 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 CPDO75976 1380 aa15.48■□□□□ 0.07
TRIM55-205ENST00000517647 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
TRIM55-205ENST00000517647 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
TRIM55-205ENST00000517647 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
TRIM55-205ENST00000517647 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
TRIM55-205ENST00000517647 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.07
TRIM55-205ENST00000517647 CD163L1Q9NR16 1453 aa15.46■□□□□ 0.06
TRIM55-205ENST00000517647 VPS72Q15906 364 aa15.45■□□□□ 0.06
TRIM55-205ENST00000517647 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
TRIM55-205ENST00000517647 PHRF1Q9P1Y6 1649 aaKnown RBP15.45■□□□□ 0.06
TRIM55-205ENST00000517647 NRKQ7Z2Y5 1582 aa15.45■□□□□ 0.06
TRIM55-205ENST00000517647 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
TRIM55-205ENST00000517647 SLIT3O75094 1523 aa15.44■□□□□ 0.06
TRIM55-205ENST00000517647 MON2Q7Z3U7 1717 aa15.44■□□□□ 0.06
TRIM55-205ENST00000517647 ONECUT3O60422 494 aaPredicted RBP15.44■□□□□ 0.06
TRIM55-205ENST00000517647 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
TRIM55-205ENST00000517647 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
TRIM55-205ENST00000517647 TMF1P82094 1093 aa15.43■□□□□ 0.06
TRIM55-205ENST00000517647 USP31Q70CQ4 1352 aa15.43■□□□□ 0.06
TRIM55-205ENST00000517647 USP54Q70EL1 1684 aa15.43■□□□□ 0.06
TRIM55-205ENST00000517647 KTN1Q86UP2 1357 aaKnown RBP15.42■□□□□ 0.06
TRIM55-205ENST00000517647 GCP02774 474 aa15.42■□□□□ 0.06
TRIM55-205ENST00000517647 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
TRIM55-205ENST00000517647 RGS12O14924 1447 aa15.42■□□□□ 0.06
TRIM55-205ENST00000517647 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
TRIM55-205ENST00000517647 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
TRIM55-205ENST00000517647 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
TRIM55-205ENST00000517647 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
TRIM55-205ENST00000517647 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
TRIM55-205ENST00000517647 KIAA0232Q92628 1395 aa15.4■□□□□ 0.06
TRIM55-205ENST00000517647 NLRP6P59044 892 aa15.4■□□□□ 0.06
TRIM55-205ENST00000517647 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
TRIM55-205ENST00000517647 GLI3P10071 1580 aa15.4■□□□□ 0.06
TRIM55-205ENST00000517647 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
TRIM55-205ENST00000517647 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 ANKRD36BQ8N2N9 1353 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 BTG4Q9NY30 223 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 ABCC6O95255 1503 aa15.38■□□□□ 0.05
TRIM55-205ENST00000517647 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRIM55-205ENST00000517647 NUTM2GQ5VZR2 741 aa15.36■□□□□ 0.05
TRIM55-205ENST00000517647 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
TRIM55-205ENST00000517647 SPATA31A5Q5VU36 1347 aa15.36■□□□□ 0.05
TRIM55-205ENST00000517647 SPATA31A7Q8IWB4 1347 aa15.36■□□□□ 0.05
TRIM55-205ENST00000517647 ZC3H6P61129 1189 aaKnown RBP15.35■□□□□ 0.05
TRIM55-205ENST00000517647 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
TRIM55-205ENST00000517647 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
TRIM55-205ENST00000517647 NFAT5O94916 1531 aa15.34■□□□□ 0.05
TRIM55-205ENST00000517647 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
TRIM55-205ENST00000517647 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
TRIM55-205ENST00000517647 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
TRIM55-205ENST00000517647 COL18A1P39060 1754 aa15.33■□□□□ 0.04
TRIM55-205ENST00000517647 CHRNA2Q15822 529 aa15.32■□□□□ 0.04
TRIM55-205ENST00000517647 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM55-205ENST00000517647 THRAP3Q9Y2W1 955 aaKnown RBP15.32■□□□□ 0.04
TRIM55-205ENST00000517647 BARGINQ6ZT62 677 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms