RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
PCM1-203ENST00000517545 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
PCM1-203ENST00000517545 RBM42Q9BTD8 480 aaKnown RBP15.49■□□□□ 0.07
PCM1-203ENST00000517545 ADGRB2O60241 1585 aa15.48■□□□□ 0.07
PCM1-203ENST00000517545 GBP4Q96PP9 640 aa15.48■□□□□ 0.07
PCM1-203ENST00000517545 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
PCM1-203ENST00000517545 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
PCM1-203ENST00000517545 C14orf93Q9H972 538 aaKnown RBP15.48■□□□□ 0.07
PCM1-203ENST00000517545 NCBP3Q53F19 620 aaKnown RBP15.48■□□□□ 0.07
PCM1-203ENST00000517545 KIF1BO60333 1816 aa15.47■□□□□ 0.07
PCM1-203ENST00000517545 IFT172Q9UG01 1749 aa15.47■□□□□ 0.07
PCM1-203ENST00000517545 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
PCM1-203ENST00000517545 QRICH2Q9H0J4 1663 aa15.47■□□□□ 0.07
PCM1-203ENST00000517545 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
PCM1-203ENST00000517545 CIZ1Q9ULV3 898 aaPredicted RBP15.47■□□□□ 0.07
PCM1-203ENST00000517545 PKNOX2Q96KN3 472 aa15.46■□□□□ 0.07
PCM1-203ENST00000517545 MROH1Q8NDA8 1641 aa15.46■□□□□ 0.07
PCM1-203ENST00000517545 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
PCM1-203ENST00000517545 SSFA2P28290 1259 aa15.46■□□□□ 0.06
PCM1-203ENST00000517545 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.06
PCM1-203ENST00000517545 GGNBP2Q9H3C7 697 aa15.46■□□□□ 0.06
PCM1-203ENST00000517545 ZMYND15Q9H091 742 aa15.45■□□□□ 0.06
PCM1-203ENST00000517545 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
PCM1-203ENST00000517545 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
PCM1-203ENST00000517545 RIPK4P57078 832 aa15.45■□□□□ 0.06
PCM1-203ENST00000517545 ANKRD45Q5TZF3 282 aa15.45■□□□□ 0.06
PCM1-203ENST00000517545 ADGRB1O14514 1584 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 ANKRD36BQ8N2N9 1353 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 GAS2L2Q8NHY3 880 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
PCM1-203ENST00000517545 ZC3H13Q5T200 1668 aaKnown RBP15.44■□□□□ 0.06
PCM1-203ENST00000517545 USP32Q8NFA0 1604 aa15.44■□□□□ 0.06
PCM1-203ENST00000517545 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
PCM1-203ENST00000517545 SKOR2Q2VWA4 1001 aaPredicted RBP15.43■□□□□ 0.06
PCM1-203ENST00000517545 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
PCM1-203ENST00000517545 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
PCM1-203ENST00000517545 K7ELQ4 463 aaPredicted RBP15.43■□□□□ 0.06
PCM1-203ENST00000517545 ABCC11Q96J66 1382 aa15.43■□□□□ 0.06
PCM1-203ENST00000517545 INO80Q9ULG1 1556 aaPredicted RBP15.42■□□□□ 0.06
PCM1-203ENST00000517545 IPO8O15397 1037 aaKnown RBP15.42■□□□□ 0.06
PCM1-203ENST00000517545 PPRC1Q5VV67 1664 aaKnown RBP15.42■□□□□ 0.06
PCM1-203ENST00000517545 EVC2Q86UK5 1308 aa15.42■□□□□ 0.06
PCM1-203ENST00000517545 ADGRB3O60242 1522 aa15.41■□□□□ 0.06
PCM1-203ENST00000517545 NSD2O96028 1365 aa15.41■□□□□ 0.06
PCM1-203ENST00000517545 NASPP49321 788 aaPredicted RBP15.41■□□□□ 0.06
PCM1-203ENST00000517545 PPIP5K1Q6PFW1 1433 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 FANCAO15360 1455 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 TULP4Q9NRJ4 1543 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 IL16Q14005 1332 aa15.4■□□□□ 0.06
PCM1-203ENST00000517545 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
PCM1-203ENST00000517545 DDX49Q9Y6V7 483 aaKnown RBP15.39■□□□□ 0.05
PCM1-203ENST00000517545 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.05
PCM1-203ENST00000517545 ZBTB7BO15156 539 aaPredicted RBP15.39■□□□□ 0.05
PCM1-203ENST00000517545 KIAA1211Q6ZU35 1233 aa15.39■□□□□ 0.05
PCM1-203ENST00000517545 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
PCM1-203ENST00000517545 BAG4O95429 457 aaKnown RBP15.38■□□□□ 0.05
PCM1-203ENST00000517545 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
PCM1-203ENST00000517545 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
PCM1-203ENST00000517545 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
PCM1-203ENST00000517545 PPP1R9BQ96SB3 815 aa15.38■□□□□ 0.05
PCM1-203ENST00000517545 CFAP74Q9C0B2 1584 aa15.38■□□□□ 0.05
PCM1-203ENST00000517545 ALDH1L2Q3SY69 923 aa15.37■□□□□ 0.05
PCM1-203ENST00000517545 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 KLHL40Q2TBA0 621 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 THUMPD2Q9BTF0 503 aaKnown RBP15.36■□□□□ 0.05
PCM1-203ENST00000517545 ARAP3Q8WWN8 1544 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 TPM2P07951 284 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 PTMSP20962 102 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 FYB1O15117 783 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 SRPK2P78362 688 aaKnown RBP15.36■□□□□ 0.05
PCM1-203ENST00000517545 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 GCC1Q96CN9 775 aa15.36■□□□□ 0.05
PCM1-203ENST00000517545 NPATQ14207 1427 aa15.35■□□□□ 0.05
PCM1-203ENST00000517545 ELL2O00472 640 aaPredicted RBP15.35■□□□□ 0.05
PCM1-203ENST00000517545 GGT6Q6P531 493 aa15.35■□□□□ 0.05
PCM1-203ENST00000517545 TSPYL6Q8N831 410 aa15.35■□□□□ 0.05
PCM1-203ENST00000517545 STK26Q9P289 416 aa15.35■□□□□ 0.05
PCM1-203ENST00000517545 PPLO60437 1756 aa15.35■□□□□ 0.05
PCM1-203ENST00000517545 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
PCM1-203ENST00000517545 MCTP1Q6DN14 999 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
PCM1-203ENST00000517545 FBLN1P23142 703 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 PKP1Q13835 747 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 MED14O60244 1454 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 NCLP19338 710 aaKnown RBP15.34■□□□□ 0.05
PCM1-203ENST00000517545 CLEC17AQ6ZS10 378 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
PCM1-203ENST00000517545 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 GLI2P10070 1586 aa15.34■□□□□ 0.05
PCM1-203ENST00000517545 CAVIN1Q6NZI2 390 aaKnown RBP15.33■□□□□ 0.05
PCM1-203ENST00000517545 MRPL50Q8N5N7 158 aaKnown RBP15.33■□□□□ 0.04
PCM1-203ENST00000517545 VAMP4O75379 141 aa15.32■□□□□ 0.04
PCM1-203ENST00000517545 CDC45O75419 566 aa15.32■□□□□ 0.04
PCM1-203ENST00000517545 ANP32BQ92688 251 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms