RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 VARSP26640 1264 aaKnown RBP4.38□□□□□ -1.71
RNU6-1299P-201ENST00000516316 LINC01559Q495D7 138 aa4.38□□□□□ -1.71
RNU6-1299P-201ENST00000516316 F12P00748 615 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1299P-201ENST00000516316 HRCP23327 699 aa4.37□□□□□ -1.71
RNU6-1299P-201ENST00000516316 KLF16Q9BXK1 252 aaPredicted RBP4.37□□□□□ -1.71
RNU6-1299P-201ENST00000516316 STK17AQ9UEE5 414 aa4.37□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TLL2Q9Y6L7 1015 aa4.37□□□□□ -1.71
RNU6-1299P-201ENST00000516316 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 INSM1Q01101 510 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 DIXDC1Q155Q3 683 aa4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 PRPF38BQ5VTL8 546 aaKnown RBP4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 AK7Q96M32 723 aa4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 CDK15Q96Q40 435 aa4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 NXF1Q9UBU9 619 aaKnown RBP4.36□□□□□ -1.71
RNU6-1299P-201ENST00000516316 PLEKHG3A1L390 1219 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 NNTQ13423 1086 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TUSC1Q2TAM9 212 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 RIC3Q7Z5B4 369 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 NPAS3Q8IXF0 933 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 CABLES1Q8TDN4 633 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 FOXJ1Q92949 421 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 ZFP42Q96MM3 310 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 ZBTB3Q9H5J0 574 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 MAP10Q9P2G4 905 aa4.35□□□□□ -1.71
RNU6-1299P-201ENST00000516316 H3BM21 787 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 PER1O15534 1290 aaPredicted RBP4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TIMP2P16035 220 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 CTHP32929 405 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 GMPRP36959 345 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 C4orf48Q5BLP8 95 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 FAM174AQ8TBP5 190 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 LIMD1Q9UGP4 676 aa4.34□□□□□ -1.71
RNU6-1299P-201ENST00000516316 LILRB3O75022 631 aa4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ADH1CP00326 375 aa4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 GRM5P41594 1212 aa4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 WDR4P57081 412 aaKnown RBP4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 MYSM1Q5VVJ2 828 aa4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 MRPL14Q6P1L8 145 aaKnown RBP4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SLC16A10Q8TF71 515 aa4.33□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ERBB4Q15303 1308 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 VEGFBP49765 207 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 PDE4DQ08499 809 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 QPCTQ16769 361 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 IRF7Q92985 503 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 C1QTNF2Q9BXJ5 285 aa4.32□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NR3C2P08235 984 aa4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NR5A1Q13285 461 aa4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 CSPP1Q1MSJ5 1256 aa4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SH3RF1Q7Z6J0 888 aa4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 PURBQ96QR8 312 aaKnown RBP4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ZFAND3Q9H8U3 227 aa4.31□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SOBPA7XYQ1 873 aa4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ZIC2O95409 532 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 RTL5Q5HYW3 569 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SH3BP5LQ7L8J4 393 aa4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 BPHLQ86WA6 291 aaPredicted RBP4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ITPKCQ96DU7 683 aa4.3□□□□□ -1.72
RNU6-1299P-201ENST00000516316 VSIG8P0DPA2 414 aa4.29□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SCARF1Q14162 830 aa4.29□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ARID5BQ14865 1188 aa4.29□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ZSCAN1Q8NBB4 408 aa4.29□□□□□ -1.72
RNU6-1299P-201ENST00000516316 SLC24A3Q9HC58 644 aa4.29□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NUTM2BA6NNL0 878 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NUTM2EB1AL46 878 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NUTM2DQ5VT03 806 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 NUTM2AQ8IVF1 878 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 TRMT44Q8IYL2 757 aaKnown RBP4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 ARMC2Q8NEN0 867 aa4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 MAP4K5Q9Y4K4 846 aa4.28□□□□□ -1.72
RNU6-1299P-201ENST00000516316 AGERQ15109 404 aa4.27□□□□□ -1.73
RNU6-1299P-201ENST00000516316 FBXO31Q5XUX0 539 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1299P-201ENST00000516316 MEIOBQ8N635 442 aa4.27□□□□□ -1.73
RNU6-1299P-201ENST00000516316 SOS2Q07890 1332 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 CLK2P49760 499 aaKnown RBP4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 CTDSPL2Q05D32 466 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 C6orf118Q5T5N4 469 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 NBPF14Q5TI25 921 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 LINC00528Q8N1L1 170 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 TSC1Q92574 1164 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 POLR3EQ9NVU0 708 aa4.26□□□□□ -1.73
RNU6-1299P-201ENST00000516316 FAM181BA6NEQ2 426 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 PPFIA3O75145 1194 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 FSHRP23945 695 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 ERFEQ4G0M1 354 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 HELBQ8NG08 1087 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 GPKOWQ92917 476 aaPredicted RBP eCLIP4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 RSPH6AQ9H0K4 717 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 DNMT3LQ9UJW3 386 aa4.25□□□□□ -1.73
RNU6-1299P-201ENST00000516316 MAN1A2O60476 641 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 BMP2P12643 396 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 PDXDC2PQ6P474 469 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 Q6ZVU0 165 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 VASH1Q7L8A9 365 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 CCDC116Q8IYX3 515 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 EMILIN1Q9Y6C2 1016 aa4.24□□□□□ -1.73
RNU6-1299P-201ENST00000516316 MAGEB6P1A0A0J9YX57 407 aa4.23□□□□□ -1.73
RNU6-1299P-201ENST00000516316 UPP2O95045 317 aa4.23□□□□□ -1.73
RNU6-1299P-201ENST00000516316 SKIV2LQ15477 1246 aaKnown RBP4.23□□□□□ -1.73
RNU6-1299P-201ENST00000516316 PPP2R2DQ66LE6 453 aa4.23□□□□□ -1.73
RNU6-1299P-201ENST00000516316 LRRN4Q8WUT4 740 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms