RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 COL22A1Q8NFW1 1626 aaPredicted RBP19.61■□□□□ 0.73
RBM47-215ENST00000515809 PIK3C2AO00443 1686 aa19.6■□□□□ 0.73
RBM47-215ENST00000515809 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
RBM47-215ENST00000515809 DDX17Q92841 729 aaKnown RBP19.6■□□□□ 0.73
RBM47-215ENST00000515809 ABCA3Q99758 1704 aa19.59■□□□□ 0.73
RBM47-215ENST00000515809 ANKRD26Q9UPS8 1709 aa19.59■□□□□ 0.73
RBM47-215ENST00000515809 USP54Q70EL1 1684 aa19.59■□□□□ 0.73
RBM47-215ENST00000515809 XPCQ01831 940 aaPredicted RBP19.59■□□□□ 0.73
RBM47-215ENST00000515809 ARHGEF10O15013 1369 aa19.58■□□□□ 0.73
RBM47-215ENST00000515809 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
RBM47-215ENST00000515809 CRYBG1Q9Y4K1 1723 aa19.56■□□□□ 0.72
RBM47-215ENST00000515809 TTC21AQ8NDW8 1320 aa19.56■□□□□ 0.72
RBM47-215ENST00000515809 PHRF1Q9P1Y6 1649 aaKnown RBP19.56■□□□□ 0.72
RBM47-215ENST00000515809 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
RBM47-215ENST00000515809 PAK3O75914 559 aaPredicted RBP19.56■□□□□ 0.72
RBM47-215ENST00000515809 HSPA1LP34931 641 aa19.56■□□□□ 0.72
RBM47-215ENST00000515809 LRRC59Q96AG4 307 aaKnown RBP19.56■□□□□ 0.72
RBM47-215ENST00000515809 NSD3Q9BZ95 1437 aa19.56■□□□□ 0.72
RBM47-215ENST00000515809 SSH2Q76I76 1423 aa19.55■□□□□ 0.72
RBM47-215ENST00000515809 JCADQ9P266 1359 aa19.55■□□□□ 0.72
RBM47-215ENST00000515809 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
RBM47-215ENST00000515809 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
RBM47-215ENST00000515809 PNPLA6Q8IY17 1366 aa19.52■□□□□ 0.72
RBM47-215ENST00000515809 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
RBM47-215ENST00000515809 LMOD2Q6P5Q4 547 aa19.51■□□□□ 0.71
RBM47-215ENST00000515809 PANK3Q9H999 370 aa19.51■□□□□ 0.71
RBM47-215ENST00000515809 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.49■□□□□ 0.71
RBM47-215ENST00000515809 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
RBM47-215ENST00000515809 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
RBM47-215ENST00000515809 NSD2O96028 1365 aa19.47■□□□□ 0.71
RBM47-215ENST00000515809 SLIT3O75094 1523 aa19.47■□□□□ 0.71
RBM47-215ENST00000515809 KNSTRNQ9Y448 316 aa19.47■□□□□ 0.71
RBM47-215ENST00000515809 SPATA31A6Q5VVP1 1343 aa19.46■□□□□ 0.71
RBM47-215ENST00000515809 LTN1O94822 1766 aa19.45■□□□□ 0.7
RBM47-215ENST00000515809 OVOS2A0A0J9YW53 1432 aa19.45■□□□□ 0.7
RBM47-215ENST00000515809 OVOS2Q6IE36 1432 aa19.45■□□□□ 0.7
RBM47-215ENST00000515809 NLRP13Q86W25 1043 aa19.45■□□□□ 0.7
RBM47-215ENST00000515809 CARD14Q9BXL6 1004 aa19.45■□□□□ 0.7
RBM47-215ENST00000515809 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
RBM47-215ENST00000515809 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
RBM47-215ENST00000515809 NME9Q86XW9 330 aa19.44■□□□□ 0.7
RBM47-215ENST00000515809 NLRP6P59044 892 aa19.43■□□□□ 0.7
RBM47-215ENST00000515809 USP19O94966 1318 aa19.43■□□□□ 0.7
RBM47-215ENST00000515809 NUTM2GQ5VZR2 741 aa19.42■□□□□ 0.7
RBM47-215ENST00000515809 ILDR1Q86SU0 546 aaPredicted RBP19.42■□□□□ 0.7
RBM47-215ENST00000515809 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
RBM47-215ENST00000515809 COG3Q96JB2 828 aa19.41■□□□□ 0.7
RBM47-215ENST00000515809 NFAT5O94916 1531 aa19.4■□□□□ 0.7
RBM47-215ENST00000515809 PLCH1Q4KWH8 1693 aa19.4■□□□□ 0.7
RBM47-215ENST00000515809 COL14A1Q05707 1796 aaKnown RBP19.39■□□□□ 0.7
RBM47-215ENST00000515809 FYB1O15117 783 aa19.39■□□□□ 0.69
RBM47-215ENST00000515809 NPC1L1Q9UHC9 1359 aa19.39■□□□□ 0.69
RBM47-215ENST00000515809 LRP6O75581 1613 aa19.38■□□□□ 0.69
RBM47-215ENST00000515809 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
RBM47-215ENST00000515809 KCNH5Q8NCM2 988 aa19.38■□□□□ 0.69
RBM47-215ENST00000515809 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
RBM47-215ENST00000515809 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
RBM47-215ENST00000515809 ABCC6O95255 1503 aa19.37■□□□□ 0.69
RBM47-215ENST00000515809 NWD2Q9ULI1 1742 aa19.37■□□□□ 0.69
RBM47-215ENST00000515809 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
RBM47-215ENST00000515809 NUTM2EB1AL46 878 aaPredicted RBP19.36■□□□□ 0.69
RBM47-215ENST00000515809 PER1O15534 1290 aaPredicted RBP19.36■□□□□ 0.69
RBM47-215ENST00000515809 NUTM2AQ8IVF1 878 aaPredicted RBP19.36■□□□□ 0.69
RBM47-215ENST00000515809 AMER1Q5JTC6 1135 aaPredicted RBP19.35■□□□□ 0.69
RBM47-215ENST00000515809 CABLES1Q8TDN4 633 aa19.35■□□□□ 0.69
RBM47-215ENST00000515809 MEX3CQ5U5Q3 659 aaKnown RBP19.34■□□□□ 0.69
RBM47-215ENST00000515809 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
RBM47-215ENST00000515809 CPDO75976 1380 aa19.33■□□□□ 0.69
RBM47-215ENST00000515809 GCP02774 474 aa19.33■□□□□ 0.68
RBM47-215ENST00000515809 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
RBM47-215ENST00000515809 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.68
RBM47-215ENST00000515809 SOX12O15370 315 aa19.32■□□□□ 0.68
RBM47-215ENST00000515809 MORC1Q86VD1 984 aa19.32■□□□□ 0.68
RBM47-215ENST00000515809 RGPD5Q99666 1765 aa19.32■□□□□ 0.68
RBM47-215ENST00000515809 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
RBM47-215ENST00000515809 KIAA0232Q92628 1395 aa19.31■□□□□ 0.68
RBM47-215ENST00000515809 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
RBM47-215ENST00000515809 COL18A1P39060 1754 aa19.3■□□□□ 0.68
RBM47-215ENST00000515809 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
RBM47-215ENST00000515809 PRDM11Q9NQV5 511 aa19.3■□□□□ 0.68
RBM47-215ENST00000515809 NRAPQ86VF7 1730 aa19.3■□□□□ 0.68
RBM47-215ENST00000515809 AATKQ6ZMQ8 1374 aa19.3■□□□□ 0.68
RBM47-215ENST00000515809 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
RBM47-215ENST00000515809 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
RBM47-215ENST00000515809 PEAK1Q9H792 1746 aa19.28■□□□□ 0.68
RBM47-215ENST00000515809 ZBTB7CA1YPR0 619 aa19.27■□□□□ 0.68
RBM47-215ENST00000515809 CNGB1Q14028 1251 aaPredicted RBP19.27■□□□□ 0.68
RBM47-215ENST00000515809 KIF24Q5T7B8 1368 aa19.27■□□□□ 0.68
RBM47-215ENST00000515809 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
RBM47-215ENST00000515809 PARD3Q8TEW0 1356 aa19.25■□□□□ 0.67
RBM47-215ENST00000515809 TNNT2P45379 298 aaPredicted RBP19.25■□□□□ 0.67
RBM47-215ENST00000515809 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
RBM47-215ENST00000515809 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
RBM47-215ENST00000515809 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
RBM47-215ENST00000515809 ARHGEF25Q86VW2 580 aa19.24■□□□□ 0.67
RBM47-215ENST00000515809 SLIT2O94813 1529 aa19.24■□□□□ 0.67
RBM47-215ENST00000515809 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
RBM47-215ENST00000515809 FLT4P35916 1363 aa19.23■□□□□ 0.67
RBM47-215ENST00000515809 NGLY1Q96IV0 654 aa19.23■□□□□ 0.67
RBM47-215ENST00000515809 AMPHP49418 695 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms