RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 SETD1BQ9UPS6 1966 aaKnown RBP20.37■□□□□ 0.85
THUMPD3-210ENST00000515662 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
THUMPD3-210ENST00000515662 NME9Q86XW9 330 aa20.36■□□□□ 0.85
THUMPD3-210ENST00000515662 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 PNPLA6Q8IY17 1366 aa20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 KCNA6P17658 529 aa20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 RRP1P56182 461 aaKnown RBP20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 SLFN5Q08AF3 891 aa20.35■□□□□ 0.85
THUMPD3-210ENST00000515662 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
THUMPD3-210ENST00000515662 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
THUMPD3-210ENST00000515662 NUTM2FA1L443 756 aa20.33■□□□□ 0.85
THUMPD3-210ENST00000515662 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.85
THUMPD3-210ENST00000515662 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
THUMPD3-210ENST00000515662 ACEP12821 1306 aa20.32■□□□□ 0.84
THUMPD3-210ENST00000515662 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
THUMPD3-210ENST00000515662 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
THUMPD3-210ENST00000515662 NRKQ7Z2Y5 1582 aa20.32■□□□□ 0.84
THUMPD3-210ENST00000515662 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
THUMPD3-210ENST00000515662 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
THUMPD3-210ENST00000515662 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
THUMPD3-210ENST00000515662 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 FBLN1P23142 703 aa20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 COG3Q96JB2 828 aa20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 CHD2O14647 1828 aaKnown RBP20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 AATKQ6ZMQ8 1374 aa20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 MYT1Q01538 1121 aa20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
THUMPD3-210ENST00000515662 USP6P35125 1406 aa20.28■□□□□ 0.84
THUMPD3-210ENST00000515662 E9PSI1 815 aa20.28■□□□□ 0.84
THUMPD3-210ENST00000515662 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
THUMPD3-210ENST00000515662 RRP7AQ9Y3A4 280 aaKnown RBP20.28■□□□□ 0.84
THUMPD3-210ENST00000515662 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
THUMPD3-210ENST00000515662 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
THUMPD3-210ENST00000515662 PLEKHF1Q96S99 279 aa20.27■□□□□ 0.83
THUMPD3-210ENST00000515662 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
THUMPD3-210ENST00000515662 NEUROD2Q15784 382 aa20.26■□□□□ 0.83
THUMPD3-210ENST00000515662 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
THUMPD3-210ENST00000515662 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
THUMPD3-210ENST00000515662 ANKARQ7Z5J8 1434 aa20.26■□□□□ 0.83
THUMPD3-210ENST00000515662 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
THUMPD3-210ENST00000515662 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
THUMPD3-210ENST00000515662 EMILIN1Q9Y6C2 1016 aa20.24■□□□□ 0.83
THUMPD3-210ENST00000515662 CDK12Q9NYV4 1490 aaPredicted RBP20.24■□□□□ 0.83
THUMPD3-210ENST00000515662 RGPD8O14715 1765 aaPredicted RBP20.24■□□□□ 0.83
THUMPD3-210ENST00000515662 FMN2Q9NZ56 1722 aa20.24■□□□□ 0.83
THUMPD3-210ENST00000515662 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
THUMPD3-210ENST00000515662 PMFBP1Q8TBY8 1022 aa20.23■□□□□ 0.83
THUMPD3-210ENST00000515662 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
THUMPD3-210ENST00000515662 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
THUMPD3-210ENST00000515662 NALCNQ8IZF0 1738 aa20.21■□□□□ 0.83
THUMPD3-210ENST00000515662 PLIN1O60240 522 aa20.2■□□□□ 0.82
THUMPD3-210ENST00000515662 NGDNQ8NEJ9 315 aaKnown RBP20.2■□□□□ 0.82
THUMPD3-210ENST00000515662 PNNQ9H307 717 aaKnown RBP20.2■□□□□ 0.82
THUMPD3-210ENST00000515662 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
THUMPD3-210ENST00000515662 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
THUMPD3-210ENST00000515662 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
THUMPD3-210ENST00000515662 FCHSD2O94868 740 aa20.19■□□□□ 0.82
THUMPD3-210ENST00000515662 IL13P35225 146 aa20.19■□□□□ 0.82
THUMPD3-210ENST00000515662 TMPOP42166 694 aaKnown RBP20.18■□□□□ 0.82
THUMPD3-210ENST00000515662 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
THUMPD3-210ENST00000515662 LRRC7Q96NW7 1537 aa20.18■□□□□ 0.82
THUMPD3-210ENST00000515662 USP31Q70CQ4 1352 aa20.17■□□□□ 0.82
THUMPD3-210ENST00000515662 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
THUMPD3-210ENST00000515662 CCDC136Q96JN2 1154 aa20.16■□□□□ 0.82
THUMPD3-210ENST00000515662 ADGRL3Q9HAR2 1447 aa20.15■□□□□ 0.82
THUMPD3-210ENST00000515662 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
THUMPD3-210ENST00000515662 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.82
THUMPD3-210ENST00000515662 NWD1Q149M9 1564 aa20.14■□□□□ 0.81
THUMPD3-210ENST00000515662 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
THUMPD3-210ENST00000515662 PIK3C2AO00443 1686 aa20.12■□□□□ 0.81
THUMPD3-210ENST00000515662 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.12■□□□□ 0.81
THUMPD3-210ENST00000515662 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
THUMPD3-210ENST00000515662 HMOX1P09601 288 aa20.11■□□□□ 0.81
THUMPD3-210ENST00000515662 RIPK4P57078 832 aa20.11■□□□□ 0.81
THUMPD3-210ENST00000515662 C20orf194Q5TEA3 1177 aa20.11■□□□□ 0.81
THUMPD3-210ENST00000515662 CRBNQ96SW2 442 aa20.1■□□□□ 0.81
THUMPD3-210ENST00000515662 RBM19Q9Y4C8 960 aaKnown RBP20.1■□□□□ 0.81
THUMPD3-210ENST00000515662 PEAK1Q9H792 1746 aa20.1■□□□□ 0.81
THUMPD3-210ENST00000515662 PHF8Q9UPP1 1060 aa20.09■□□□□ 0.81
THUMPD3-210ENST00000515662 BCAR3O75815 825 aa20.09■□□□□ 0.81
THUMPD3-210ENST00000515662 NEFMP07197 916 aa20.09■□□□□ 0.81
THUMPD3-210ENST00000515662 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
THUMPD3-210ENST00000515662 IL16Q14005 1332 aa20.08■□□□□ 0.8
THUMPD3-210ENST00000515662 EIF4A2Q14240 407 aaKnown RBP20.07■□□□□ 0.8
THUMPD3-210ENST00000515662 NFE2L2Q16236 605 aa20.06■□□□□ 0.8
THUMPD3-210ENST00000515662 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
THUMPD3-210ENST00000515662 USP54Q70EL1 1684 aa20.06■□□□□ 0.8
THUMPD3-210ENST00000515662 MAP3K19Q56UN5 1328 aa20.06■□□□□ 0.8
THUMPD3-210ENST00000515662 SOX12O15370 315 aa20.06■□□□□ 0.8
THUMPD3-210ENST00000515662 NLRP6P59044 892 aa20.05■□□□□ 0.8
THUMPD3-210ENST00000515662 MARF1Q9Y4F3 1742 aaKnown RBP20.05■□□□□ 0.8
THUMPD3-210ENST00000515662 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
THUMPD3-210ENST00000515662 HSP90AB2PQ58FF8 381 aa20.05■□□□□ 0.8
THUMPD3-210ENST00000515662 ANP32EQ9BTT0 268 aa20.04■□□□□ 0.8
THUMPD3-210ENST00000515662 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
THUMPD3-210ENST00000515662 PROSER2Q86WR7 435 aaPredicted RBP20.03■□□□□ 0.8
THUMPD3-210ENST00000515662 SBNO1A3KN83 1393 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms