RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
TPM3-222ENST00000515609 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
TPM3-222ENST00000515609 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
TPM3-222ENST00000515609 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
TPM3-222ENST00000515609 NALCNQ8IZF0 1738 aa12.6□□□□□ -0.39
TPM3-222ENST00000515609 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
TPM3-222ENST00000515609 MTHFSP49914 203 aa12.6□□□□□ -0.39
TPM3-222ENST00000515609 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
TPM3-222ENST00000515609 PSME1Q06323 249 aa12.59□□□□□ -0.39
TPM3-222ENST00000515609 PDE3BQ13370 1112 aa12.59□□□□□ -0.39
TPM3-222ENST00000515609 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
TPM3-222ENST00000515609 TMEM94Q12767 1356 aa12.58□□□□□ -0.4
TPM3-222ENST00000515609 NEFMP07197 916 aa12.58□□□□□ -0.4
TPM3-222ENST00000515609 PMFBP1Q8TBY8 1022 aa12.58□□□□□ -0.4
TPM3-222ENST00000515609 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
TPM3-222ENST00000515609 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
TPM3-222ENST00000515609 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
TPM3-222ENST00000515609 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
TPM3-222ENST00000515609 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
TPM3-222ENST00000515609 NME9Q86XW9 330 aa12.56□□□□□ -0.4
TPM3-222ENST00000515609 ADAMTS8Q9UP79 889 aa12.56□□□□□ -0.4
TPM3-222ENST00000515609 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
TPM3-222ENST00000515609 SSH2Q76I76 1423 aa12.55□□□□□ -0.4
TPM3-222ENST00000515609 DIAPH1O60610 1272 aaKnown RBP12.55□□□□□ -0.4
TPM3-222ENST00000515609 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
TPM3-222ENST00000515609 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
TPM3-222ENST00000515609 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
TPM3-222ENST00000515609 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
TPM3-222ENST00000515609 LRRC7Q96NW7 1537 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
TPM3-222ENST00000515609 NLRP6P59044 892 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
TPM3-222ENST00000515609 SMG6Q86US8 1419 aaKnown RBP12.53□□□□□ -0.4
TPM3-222ENST00000515609 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.41
TPM3-222ENST00000515609 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.41
TPM3-222ENST00000515609 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
TPM3-222ENST00000515609 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
TPM3-222ENST00000515609 FCHSD2O94868 740 aa12.51□□□□□ -0.41
TPM3-222ENST00000515609 NEFLP07196 543 aa12.51□□□□□ -0.41
TPM3-222ENST00000515609 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
TPM3-222ENST00000515609 RGPD8O14715 1765 aaPredicted RBP12.51□□□□□ -0.41
TPM3-222ENST00000515609 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
TPM3-222ENST00000515609 MST1RQ04912 1400 aa12.5□□□□□ -0.41
TPM3-222ENST00000515609 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
TPM3-222ENST00000515609 FOXO3O43524 673 aa12.49□□□□□ -0.41
TPM3-222ENST00000515609 KRT28Q7Z3Y7 464 aa12.49□□□□□ -0.41
TPM3-222ENST00000515609 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
TPM3-222ENST00000515609 SBNO1A3KN83 1393 aa12.48□□□□□ -0.41
TPM3-222ENST00000515609 FLT4P35916 1363 aa12.48□□□□□ -0.41
TPM3-222ENST00000515609 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
TPM3-222ENST00000515609 AMPHP49418 695 aa12.48□□□□□ -0.41
TPM3-222ENST00000515609 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
TPM3-222ENST00000515609 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
TPM3-222ENST00000515609 SLAIN2Q9P270 581 aa12.47□□□□□ -0.41
TPM3-222ENST00000515609 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
TPM3-222ENST00000515609 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
TPM3-222ENST00000515609 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
TPM3-222ENST00000515609 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
TPM3-222ENST00000515609 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
TPM3-222ENST00000515609 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.42
TPM3-222ENST00000515609 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
TPM3-222ENST00000515609 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
TPM3-222ENST00000515609 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
TPM3-222ENST00000515609 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
TPM3-222ENST00000515609 APAF1O14727 1248 aa12.44□□□□□ -0.42
TPM3-222ENST00000515609 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
TPM3-222ENST00000515609 ZRANB1Q9UGI0 708 aa12.44□□□□□ -0.42
TPM3-222ENST00000515609 E9PSI1 815 aa12.43□□□□□ -0.42
TPM3-222ENST00000515609 IL13P35225 146 aa12.43□□□□□ -0.42
TPM3-222ENST00000515609 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
TPM3-222ENST00000515609 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
TPM3-222ENST00000515609 WDR63Q8IWG1 891 aa12.43□□□□□ -0.42
TPM3-222ENST00000515609 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
TPM3-222ENST00000515609 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
TPM3-222ENST00000515609 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
TPM3-222ENST00000515609 CCDC146Q8IYE0 955 aa12.42□□□□□ -0.42
TPM3-222ENST00000515609 GCP02774 474 aa12.41□□□□□ -0.42
TPM3-222ENST00000515609 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
TPM3-222ENST00000515609 USP19O94966 1318 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 TNS3Q68CZ2 1445 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 SOX12O15370 315 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 IP6K1Q92551 441 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 MYH16Q9H6N6 1097 aa12.4□□□□□ -0.42
TPM3-222ENST00000515609 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
TPM3-222ENST00000515609 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
TPM3-222ENST00000515609 SLIT3O75094 1523 aa12.39□□□□□ -0.43
TPM3-222ENST00000515609 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
TPM3-222ENST00000515609 NUTM2GQ5VZR2 741 aa12.39□□□□□ -0.43
TPM3-222ENST00000515609 PLEKHF1Q96S99 279 aa12.39□□□□□ -0.43
TPM3-222ENST00000515609 GTF3C3Q9Y5Q9 886 aa12.39□□□□□ -0.43
TPM3-222ENST00000515609 TRPM3Q9HCF6 1732 aaPredicted RBP12.39□□□□□ -0.43
TPM3-222ENST00000515609 IL16Q14005 1332 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
TPM3-222ENST00000515609 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms