RNA–Protein interactions for RNA: ENST00000515605.1

TNIP3-207, Transcript of TNFAIP3 interacting protein 3, humanhuman

TSL 4

Gene TNIP3, Length 838 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-207ENST00000515605 MYOM1P52179 1685 aa17.36■□□□□ 0.37
TNIP3-207ENST00000515605 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
TNIP3-207ENST00000515605 SPATA31A3Q5VYP0 1347 aa17.36■□□□□ 0.37
TNIP3-207ENST00000515605 USP6P35125 1406 aa17.36■□□□□ 0.37
TNIP3-207ENST00000515605 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
TNIP3-207ENST00000515605 KIF7Q2M1P5 1343 aa17.34■□□□□ 0.37
TNIP3-207ENST00000515605 ALS2Q96Q42 1657 aa17.33■□□□□ 0.37
TNIP3-207ENST00000515605 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
TNIP3-207ENST00000515605 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
TNIP3-207ENST00000515605 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
TNIP3-207ENST00000515605 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.36
TNIP3-207ENST00000515605 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
TNIP3-207ENST00000515605 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
TNIP3-207ENST00000515605 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
TNIP3-207ENST00000515605 TNS3Q68CZ2 1445 aa17.32■□□□□ 0.36
TNIP3-207ENST00000515605 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
TNIP3-207ENST00000515605 JCADQ9P266 1359 aa17.32■□□□□ 0.36
TNIP3-207ENST00000515605 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
TNIP3-207ENST00000515605 MON2Q7Z3U7 1717 aa17.32■□□□□ 0.36
TNIP3-207ENST00000515605 SHPRHQ149N8 1683 aa17.32■□□□□ 0.36
TNIP3-207ENST00000515605 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
TNIP3-207ENST00000515605 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
TNIP3-207ENST00000515605 PSME1Q06323 249 aa17.31■□□□□ 0.36
TNIP3-207ENST00000515605 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
TNIP3-207ENST00000515605 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
TNIP3-207ENST00000515605 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
TNIP3-207ENST00000515605 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
TNIP3-207ENST00000515605 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
TNIP3-207ENST00000515605 TMC1Q8TDI8 760 aa17.28■□□□□ 0.36
TNIP3-207ENST00000515605 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
TNIP3-207ENST00000515605 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
TNIP3-207ENST00000515605 ARHGEF10O15013 1369 aa17.27■□□□□ 0.35
TNIP3-207ENST00000515605 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
TNIP3-207ENST00000515605 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
TNIP3-207ENST00000515605 TTC21AQ8NDW8 1320 aa17.25■□□□□ 0.35
TNIP3-207ENST00000515605 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
TNIP3-207ENST00000515605 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
TNIP3-207ENST00000515605 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
TNIP3-207ENST00000515605 USP54Q70EL1 1684 aa17.25■□□□□ 0.35
TNIP3-207ENST00000515605 USP19O94966 1318 aa17.24■□□□□ 0.35
TNIP3-207ENST00000515605 LRP6O75581 1613 aa17.24■□□□□ 0.35
TNIP3-207ENST00000515605 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
TNIP3-207ENST00000515605 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
TNIP3-207ENST00000515605 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
TNIP3-207ENST00000515605 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
TNIP3-207ENST00000515605 PANK3Q9H999 370 aa17.21■□□□□ 0.35
TNIP3-207ENST00000515605 SLIT3O75094 1523 aa17.21■□□□□ 0.34
TNIP3-207ENST00000515605 ABCA3Q99758 1704 aa17.2■□□□□ 0.34
TNIP3-207ENST00000515605 FYB1O15117 783 aa17.19■□□□□ 0.34
TNIP3-207ENST00000515605 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
TNIP3-207ENST00000515605 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
TNIP3-207ENST00000515605 NME9Q86XW9 330 aa17.18■□□□□ 0.34
TNIP3-207ENST00000515605 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
TNIP3-207ENST00000515605 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
TNIP3-207ENST00000515605 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
TNIP3-207ENST00000515605 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
TNIP3-207ENST00000515605 NLRP13Q86W25 1043 aa17.16■□□□□ 0.34
TNIP3-207ENST00000515605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
TNIP3-207ENST00000515605 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
TNIP3-207ENST00000515605 NFAT5O94916 1531 aa17.16■□□□□ 0.34
TNIP3-207ENST00000515605 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
TNIP3-207ENST00000515605 CPDO75976 1380 aa17.15■□□□□ 0.34
TNIP3-207ENST00000515605 NLRP6P59044 892 aa17.14■□□□□ 0.33
TNIP3-207ENST00000515605 NUTM2GQ5VZR2 741 aa17.14■□□□□ 0.33
TNIP3-207ENST00000515605 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
TNIP3-207ENST00000515605 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
TNIP3-207ENST00000515605 GCP02774 474 aa17.13■□□□□ 0.33
TNIP3-207ENST00000515605 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
TNIP3-207ENST00000515605 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
TNIP3-207ENST00000515605 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
TNIP3-207ENST00000515605 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
TNIP3-207ENST00000515605 NSD2O96028 1365 aa17.11■□□□□ 0.33
TNIP3-207ENST00000515605 SLIT2O94813 1529 aa17.11■□□□□ 0.33
TNIP3-207ENST00000515605 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
TNIP3-207ENST00000515605 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
TNIP3-207ENST00000515605 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
TNIP3-207ENST00000515605 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
TNIP3-207ENST00000515605 KIAA0232Q92628 1395 aa17.08■□□□□ 0.32
TNIP3-207ENST00000515605 FAM83GA6ND36 823 aa17.08■□□□□ 0.32
TNIP3-207ENST00000515605 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
TNIP3-207ENST00000515605 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
TNIP3-207ENST00000515605 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
TNIP3-207ENST00000515605 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
TNIP3-207ENST00000515605 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
TNIP3-207ENST00000515605 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
TNIP3-207ENST00000515605 LMO7Q8WWI1 1683 aa17.07■□□□□ 0.32
TNIP3-207ENST00000515605 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
TNIP3-207ENST00000515605 COL18A1P39060 1754 aa17.07■□□□□ 0.32
TNIP3-207ENST00000515605 ABCC6O95255 1503 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 ADAMTS2O95450 1211 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 COG3Q96JB2 828 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
TNIP3-207ENST00000515605 COL14A1Q05707 1796 aaKnown RBP17.04■□□□□ 0.32
TNIP3-207ENST00000515605 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
TNIP3-207ENST00000515605 ATF5Q9Y2D1 282 aaPredicted RBP17.03■□□□□ 0.32
TNIP3-207ENST00000515605 CAMTA1Q9Y6Y1 1673 aa17.03■□□□□ 0.32
TNIP3-207ENST00000515605 NWD2Q9ULI1 1742 aa17.02■□□□□ 0.32
TNIP3-207ENST00000515605 FBLN1P23142 703 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms