RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CD163L1Q9NR16 1453 aa16.55■□□□□ 0.24
SNF8-215ENST00000515572 HDGFL2Q7Z4V5 671 aaPredicted RBP16.55■□□□□ 0.24
SNF8-215ENST00000515572 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
SNF8-215ENST00000515572 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
SNF8-215ENST00000515572 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
SNF8-215ENST00000515572 ANKRD36BQ8N2N9 1353 aa16.52■□□□□ 0.24
SNF8-215ENST00000515572 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
SNF8-215ENST00000515572 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
SNF8-215ENST00000515572 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
SNF8-215ENST00000515572 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
SNF8-215ENST00000515572 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
SNF8-215ENST00000515572 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
SNF8-215ENST00000515572 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
SNF8-215ENST00000515572 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
SNF8-215ENST00000515572 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
SNF8-215ENST00000515572 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
SNF8-215ENST00000515572 KIF7Q2M1P5 1343 aa16.49■□□□□ 0.23
SNF8-215ENST00000515572 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
SNF8-215ENST00000515572 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
SNF8-215ENST00000515572 TTC21BQ7Z4L5 1316 aa16.47■□□□□ 0.23
SNF8-215ENST00000515572 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
SNF8-215ENST00000515572 LRP6O75581 1613 aa16.47■□□□□ 0.23
SNF8-215ENST00000515572 PHRF1Q9P1Y6 1649 aaKnown RBP16.47■□□□□ 0.23
SNF8-215ENST00000515572 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
SNF8-215ENST00000515572 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
SNF8-215ENST00000515572 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SNF8-215ENST00000515572 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SNF8-215ENST00000515572 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SNF8-215ENST00000515572 KIF20BQ96Q89 1820 aa16.45■□□□□ 0.22
SNF8-215ENST00000515572 HAP1P54257 671 aaPredicted RBP16.44■□□□□ 0.22
SNF8-215ENST00000515572 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
SNF8-215ENST00000515572 USP31Q70CQ4 1352 aa16.43■□□□□ 0.22
SNF8-215ENST00000515572 NLRP6P59044 892 aa16.43■□□□□ 0.22
SNF8-215ENST00000515572 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
SNF8-215ENST00000515572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNF8-215ENST00000515572 USP19O94966 1318 aa16.43■□□□□ 0.22
SNF8-215ENST00000515572 SLIT3O75094 1523 aa16.42■□□□□ 0.22
SNF8-215ENST00000515572 CABLES1Q8TDN4 633 aa16.42■□□□□ 0.22
SNF8-215ENST00000515572 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
SNF8-215ENST00000515572 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
SNF8-215ENST00000515572 CARD14Q9BXL6 1004 aa16.41■□□□□ 0.22
SNF8-215ENST00000515572 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
SNF8-215ENST00000515572 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
SNF8-215ENST00000515572 NME9Q86XW9 330 aa16.4■□□□□ 0.22
SNF8-215ENST00000515572 PANK3Q9H999 370 aa16.4■□□□□ 0.22
SNF8-215ENST00000515572 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
SNF8-215ENST00000515572 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
SNF8-215ENST00000515572 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
SNF8-215ENST00000515572 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
SNF8-215ENST00000515572 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
SNF8-215ENST00000515572 NWD2Q9ULI1 1742 aa16.38■□□□□ 0.21
SNF8-215ENST00000515572 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
SNF8-215ENST00000515572 PLCH1Q4KWH8 1693 aa16.37■□□□□ 0.21
SNF8-215ENST00000515572 GCP02774 474 aa16.37■□□□□ 0.21
SNF8-215ENST00000515572 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
SNF8-215ENST00000515572 CPDO75976 1380 aa16.37■□□□□ 0.21
SNF8-215ENST00000515572 FYB1O15117 783 aa16.36■□□□□ 0.21
SNF8-215ENST00000515572 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
SNF8-215ENST00000515572 COG3Q96JB2 828 aa16.36■□□□□ 0.21
SNF8-215ENST00000515572 C8orf37Q96NL8 207 aa16.36■□□□□ 0.21
SNF8-215ENST00000515572 NFAT5O94916 1531 aa16.35■□□□□ 0.21
SNF8-215ENST00000515572 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
SNF8-215ENST00000515572 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.35■□□□□ 0.21
SNF8-215ENST00000515572 LTN1O94822 1766 aa16.34■□□□□ 0.21
SNF8-215ENST00000515572 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
SNF8-215ENST00000515572 KNSTRNQ9Y448 316 aa16.34■□□□□ 0.21
SNF8-215ENST00000515572 NSD2O96028 1365 aa16.34■□□□□ 0.21
SNF8-215ENST00000515572 KIAA0232Q92628 1395 aa16.34■□□□□ 0.21
SNF8-215ENST00000515572 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
SNF8-215ENST00000515572 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
SNF8-215ENST00000515572 AFF2P51816 1311 aa16.33■□□□□ 0.2
SNF8-215ENST00000515572 SLIT2O94813 1529 aa16.33■□□□□ 0.2
SNF8-215ENST00000515572 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
SNF8-215ENST00000515572 ABCC6O95255 1503 aa16.32■□□□□ 0.2
SNF8-215ENST00000515572 ZC3H6P61129 1189 aaKnown RBP16.32■□□□□ 0.2
SNF8-215ENST00000515572 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
SNF8-215ENST00000515572 LMO7Q8WWI1 1683 aa16.31■□□□□ 0.2
SNF8-215ENST00000515572 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
SNF8-215ENST00000515572 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
SNF8-215ENST00000515572 USP21Q9UK80 565 aa16.3■□□□□ 0.2
SNF8-215ENST00000515572 COL18A1P39060 1754 aa16.3■□□□□ 0.2
SNF8-215ENST00000515572 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
SNF8-215ENST00000515572 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
SNF8-215ENST00000515572 SOX12O15370 315 aa16.29■□□□□ 0.2
SNF8-215ENST00000515572 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
SNF8-215ENST00000515572 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
SNF8-215ENST00000515572 CHRNA2Q15822 529 aa16.28■□□□□ 0.2
SNF8-215ENST00000515572 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
SNF8-215ENST00000515572 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
SNF8-215ENST00000515572 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
SNF8-215ENST00000515572 UNC5CLQ8IV45 518 aa16.27■□□□□ 0.2
SNF8-215ENST00000515572 BTG4Q9NY30 223 aa16.27■□□□□ 0.2
SNF8-215ENST00000515572 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
SNF8-215ENST00000515572 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.19
SNF8-215ENST00000515572 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
SNF8-215ENST00000515572 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
SNF8-215ENST00000515572 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
SNF8-215ENST00000515572 ATRNO75882 1429 aa16.25■□□□□ 0.19
SNF8-215ENST00000515572 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
SNF8-215ENST00000515572 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms