RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 TRIM35Q9UPQ4 493 aa22.46■■□□□ 1.19
SNX2-213ENST00000514949 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
SNX2-213ENST00000514949 USP19O94966 1318 aa22.45■■□□□ 1.18
SNX2-213ENST00000514949 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
SNX2-213ENST00000514949 ZKSCAN2Q63HK3 967 aa22.44■■□□□ 1.18
SNX2-213ENST00000514949 PNNQ9H307 717 aaKnown RBP22.44■■□□□ 1.18
SNX2-213ENST00000514949 KIF20BQ96Q89 1820 aa22.44■■□□□ 1.18
SNX2-213ENST00000514949 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
SNX2-213ENST00000514949 CDK19Q9BWU1 502 aa22.43■■□□□ 1.18
SNX2-213ENST00000514949 SPATA31D1Q6ZQQ2 1576 aa22.43■■□□□ 1.18
SNX2-213ENST00000514949 DAXXQ9UER7 740 aaPredicted RBP22.43■■□□□ 1.18
SNX2-213ENST00000514949 RWDD1Q9H446 243 aaPredicted RBP22.42■■□□□ 1.18
SNX2-213ENST00000514949 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
SNX2-213ENST00000514949 ATP7BP35670 1465 aa22.42■■□□□ 1.18
SNX2-213ENST00000514949 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
SNX2-213ENST00000514949 A2ML1A8K2U0 1454 aa22.42■■□□□ 1.18
SNX2-213ENST00000514949 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
SNX2-213ENST00000514949 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
SNX2-213ENST00000514949 DIAPH1O60610 1272 aaKnown RBP22.4■■□□□ 1.18
SNX2-213ENST00000514949 BCL2L13Q9BXK5 485 aa22.4■■□□□ 1.18
SNX2-213ENST00000514949 DZIP1LQ8IYY4 767 aaKnown RBP22.39■■□□□ 1.18
SNX2-213ENST00000514949 CABP1Q9NZU7 370 aa22.38■■□□□ 1.17
SNX2-213ENST00000514949 FCHSD2O94868 740 aa22.37■■□□□ 1.17
SNX2-213ENST00000514949 EXOSC9Q06265 439 aaKnown RBP22.37■■□□□ 1.17
SNX2-213ENST00000514949 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
SNX2-213ENST00000514949 SLC4A3P48751 1232 aa22.37■■□□□ 1.17
SNX2-213ENST00000514949 PDZRN3Q9UPQ7 1066 aa22.36■■□□□ 1.17
SNX2-213ENST00000514949 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
SNX2-213ENST00000514949 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
SNX2-213ENST00000514949 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
SNX2-213ENST00000514949 NFKBIBQ15653 356 aa22.36■■□□□ 1.17
SNX2-213ENST00000514949 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
SNX2-213ENST00000514949 RIMS2Q9UQ26 1411 aa22.35■■□□□ 1.17
SNX2-213ENST00000514949 RIPK4P57078 832 aa22.34■■□□□ 1.17
SNX2-213ENST00000514949 FTSJ3Q8IY81 847 aaKnown RBP22.34■■□□□ 1.17
SNX2-213ENST00000514949 SSH1Q8WYL5 1049 aa22.34■■□□□ 1.17
SNX2-213ENST00000514949 TRIM27P14373 513 aa22.34■■□□□ 1.17
SNX2-213ENST00000514949 FAM69CQ0P6D2 419 aa22.34■■□□□ 1.17
SNX2-213ENST00000514949 HDAC1Q13547 482 aaPredicted RBP22.34■■□□□ 1.17
SNX2-213ENST00000514949 SMC4Q9NTJ3 1288 aa22.34■■□□□ 1.17
SNX2-213ENST00000514949 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.17
SNX2-213ENST00000514949 ATF7IPQ6VMQ6 1270 aa22.33■■□□□ 1.17
SNX2-213ENST00000514949 FAM135BQ49AJ0 1406 aa22.33■■□□□ 1.16
SNX2-213ENST00000514949 SEC24BO95487 1268 aa22.33■■□□□ 1.16
SNX2-213ENST00000514949 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.16
SNX2-213ENST00000514949 DDX19BQ9UMR2 479 aa22.33■■□□□ 1.16
SNX2-213ENST00000514949 CPSF1Q10570 1443 aaKnown RBP22.32■■□□□ 1.16
SNX2-213ENST00000514949 ZNF428Q96B54 188 aa22.32■■□□□ 1.16
SNX2-213ENST00000514949 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
SNX2-213ENST00000514949 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
SNX2-213ENST00000514949 POLKQ9UBT6 870 aa22.31■■□□□ 1.16
SNX2-213ENST00000514949 ALDH1L2Q3SY69 923 aa22.31■■□□□ 1.16
SNX2-213ENST00000514949 RSPH6AQ9H0K4 717 aa22.3■■□□□ 1.16
SNX2-213ENST00000514949 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
SNX2-213ENST00000514949 KIF16BQ96L93 1317 aa22.29■■□□□ 1.16
SNX2-213ENST00000514949 SIRT1Q96EB6 747 aa22.29■■□□□ 1.16
SNX2-213ENST00000514949 EDC4Q6P2E9 1401 aaKnown RBP22.29■■□□□ 1.16
SNX2-213ENST00000514949 IPO8O15397 1037 aaKnown RBP22.28■■□□□ 1.16
SNX2-213ENST00000514949 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
SNX2-213ENST00000514949 WAPLQ7Z5K2 1190 aa22.27■■□□□ 1.16
SNX2-213ENST00000514949 AATKQ6ZMQ8 1374 aa22.27■■□□□ 1.16
SNX2-213ENST00000514949 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.16
SNX2-213ENST00000514949 TBC1D32Q96NH3 1257 aa22.27■■□□□ 1.15
SNX2-213ENST00000514949 NOB1Q9ULX3 412 aaKnown RBP22.27■■□□□ 1.15
SNX2-213ENST00000514949 BECN1Q14457 450 aa22.26■■□□□ 1.15
SNX2-213ENST00000514949 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
SNX2-213ENST00000514949 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
SNX2-213ENST00000514949 TECPR2O15040 1411 aa22.26■■□□□ 1.15
SNX2-213ENST00000514949 SMC5Q8IY18 1101 aa22.25■■□□□ 1.15
SNX2-213ENST00000514949 ZBTB40Q9NUA8 1239 aa22.25■■□□□ 1.15
SNX2-213ENST00000514949 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
SNX2-213ENST00000514949 WASLO00401 505 aaPredicted RBP22.25■■□□□ 1.15
SNX2-213ENST00000514949 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
SNX2-213ENST00000514949 TSPOAP1O95153 1857 aa22.24■■□□□ 1.15
SNX2-213ENST00000514949 PRKAR2BP31323 418 aa22.24■■□□□ 1.15
SNX2-213ENST00000514949 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
SNX2-213ENST00000514949 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
SNX2-213ENST00000514949 GSE1Q14687 1217 aa22.22■■□□□ 1.15
SNX2-213ENST00000514949 ITPRIPQ8IWB1 547 aa22.22■■□□□ 1.15
SNX2-213ENST00000514949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
SNX2-213ENST00000514949 IL13P35225 146 aa22.21■■□□□ 1.15
SNX2-213ENST00000514949 TMEM57Q8N5G2 664 aa22.21■■□□□ 1.15
SNX2-213ENST00000514949 MON2Q7Z3U7 1717 aa22.21■■□□□ 1.15
SNX2-213ENST00000514949 METP08581 1390 aa22.2■■□□□ 1.15
SNX2-213ENST00000514949 ARHGAP45Q92619 1136 aa22.19■■□□□ 1.14
SNX2-213ENST00000514949 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
SNX2-213ENST00000514949 CPS1P31327 1500 aa22.19■■□□□ 1.14
SNX2-213ENST00000514949 ZNF853P0CG23 659 aa22.18■■□□□ 1.14
SNX2-213ENST00000514949 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
SNX2-213ENST00000514949 IFT57Q9NWB7 429 aa22.18■■□□□ 1.14
SNX2-213ENST00000514949 HDGFP51858 240 aaKnown RBP22.17■■□□□ 1.14
SNX2-213ENST00000514949 CCDC61Q9Y6R9 512 aa22.17■■□□□ 1.14
SNX2-213ENST00000514949 AKAP12Q02952 1782 aa22.17■■□□□ 1.14
SNX2-213ENST00000514949 PTCH1Q13635 1447 aa22.16■■□□□ 1.14
SNX2-213ENST00000514949 VAMP4O75379 141 aa22.16■■□□□ 1.14
SNX2-213ENST00000514949 FRAT2O75474 233 aaPredicted RBP22.16■■□□□ 1.14
SNX2-213ENST00000514949 GNAI1P63096 354 aa22.16■■□□□ 1.14
SNX2-213ENST00000514949 NUDT16Q96DE0 195 aaKnown RBP22.16■■□□□ 1.14
SNX2-213ENST00000514949 C3P01024 1663 aa22.16■■□□□ 1.14
SNX2-213ENST00000514949 FBLN1P23142 703 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms