RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 NUP153P49790 1475 aaKnown RBP7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 TATP17735 454 aaPredicted RBP7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 FOSBP53539 338 aa7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 MEX3CQ5U5Q3 659 aaKnown RBP7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 TOM1L2Q6ZVM7 507 aa7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 CREBRFQ8IUR6 639 aa7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
ATP2C1-222ENST00000514654 RASSF8Q8NHQ8 419 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 ARID3AQ99856 593 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 DDX11L8A8MPP1 907 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 FOXO3O43524 673 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 CDC45O75419 566 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 MYL6BP14649 208 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 CHAF1AQ13111 956 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 MVPQ14764 893 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 NFE2L2Q16236 605 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 KIAA2012Q0VF49 1180 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 GSE1Q14687 1217 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 CLASRPQ8N2M8 674 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 PRDM11Q9NQV5 511 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 DHX29Q7Z478 1369 aaKnown RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 NUTM2BA6NNL0 878 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 NUTM2EB1AL46 878 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 AAMPQ13685 434 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 VPS37DQ86XT2 251 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 NUTM2AQ8IVF1 878 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 CHMP5Q9NZZ3 219 aa7.53□□□□□ -1.2
ATP2C1-222ENST00000514654 TMEM57Q8N5G2 664 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 C14orf93Q9H972 538 aaKnown RBP7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 VPS37CA5D8V6 355 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 ERC2O15083 957 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 GNAI2P04899 355 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 SIL1Q9H173 461 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 WASHC4Q2M389 1173 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 SSH1Q8WYL5 1049 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 KIF3AQ9Y496 699 aa7.52□□□□□ -1.21
ATP2C1-222ENST00000514654 CABP4P57796 275 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 RAD21O60216 631 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 MAP4K4O95819 1239 aaPredicted RBP7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 FSD1Q9BTV5 496 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 BACH2Q9BYV9 841 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 DENND4BO75064 1496 aaPredicted RBP7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 MAPKBP1O60336 1514 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 DNAJC2Q99543 621 aaKnown RBP7.51□□□□□ -1.21
ATP2C1-222ENST00000514654 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 POGZQ7Z3K3 1410 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 CPLX1O14810 134 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 RARSP54136 660 aaKnown RBP7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 RNF20Q5VTR2 975 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 FBXW7Q969H0 707 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 IL1RAPL2Q9NP60 686 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 BTBD11A6QL63 1104 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 KDM4AO75164 1064 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 NEK4P51957 841 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 LRRFIP1Q32MZ4 808 aaKnown RBP7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 UGGT2Q9NYU1 1516 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 TRAPPC8Q9Y2L5 1435 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 FYB1O15117 783 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 GCC1Q96CN9 775 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 SMC3Q9UQE7 1217 aa7.5□□□□□ -1.21
ATP2C1-222ENST00000514654 AKAP17AQ02040 695 aaKnown RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 DUSP27Q5VZP5 1158 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 SYNE3Q6ZMZ3 975 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 ATP6V1DQ9Y5K8 247 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 PLCH2O75038 1416 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 AEBP2Q6ZN18 517 aaPredicted RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 ASXL2Q76L83 1435 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 TRDNQ13061 729 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 VPS53Q5VIR6 699 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 EXOC6BQ9Y2D4 811 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 SCAF11Q99590 1463 aaKnown RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 CT47B1P0C2W7 299 aaPredicted RBP7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 CHD1LQ86WJ1 897 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 CNTROBQ8N137 903 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 PHF8Q9UPP1 1060 aa7.49□□□□□ -1.21
ATP2C1-222ENST00000514654 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 F6X3S4 739 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 SRGAP3O43295 1099 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 MARCH6O60337 910 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 PIP4K2BP78356 416 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 CPLX2Q6PUV4 134 aaKnown RBP7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 RAPGEF6Q8TEU7 1601 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 PTCD1O75127 700 aaKnown RBP7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 CCDC27Q2M243 656 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 SPG7Q9UQ90 795 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 PHF14O94880 888 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 KDM5BQ9UGL1 1544 aa7.48□□□□□ -1.21
ATP2C1-222ENST00000514654 SKOR2Q2VWA4 1001 aaPredicted RBP7.47□□□□□ -1.21
ATP2C1-222ENST00000514654 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
ATP2C1-222ENST00000514654 CCDC34Q96HJ3 373 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms