RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
CPNE4-211ENST00000514439 PLEKHF1Q96S99 279 aa10.65□□□□□ -0.7
CPNE4-211ENST00000514439 MAPK8IP2Q13387 824 aaPredicted RBP10.64□□□□□ -0.71
CPNE4-211ENST00000514439 ADAMTS13Q76LX8 1427 aa10.64□□□□□ -0.71
CPNE4-211ENST00000514439 DIAPH1O60610 1272 aaKnown RBP10.64□□□□□ -0.71
CPNE4-211ENST00000514439 EDC4Q6P2E9 1401 aaKnown RBP10.64□□□□□ -0.71
CPNE4-211ENST00000514439 MS4A1P11836 297 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 CENPQQ7L2Z9 268 aaPredicted RBP10.63□□□□□ -0.71
CPNE4-211ENST00000514439 SKAP1Q86WV1 359 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 CEBPAP49715 358 aaPredicted RBP10.63□□□□□ -0.71
CPNE4-211ENST00000514439 RARSP54136 660 aaKnown RBP10.63□□□□□ -0.71
CPNE4-211ENST00000514439 MYT1Q01538 1121 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 NUDT16Q96DE0 195 aaKnown RBP10.63□□□□□ -0.71
CPNE4-211ENST00000514439 MYH16Q9H6N6 1097 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 MAPK8IP3Q9UPT6 1336 aa10.63□□□□□ -0.71
CPNE4-211ENST00000514439 CDC42BPGQ6DT37 1551 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 PLEKHG1Q9ULL1 1385 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 NCKAP5LQ9HCH0 1330 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 FBLN1P23142 703 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 LTKP29376 864 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
CPNE4-211ENST00000514439 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 CANXP27824 592 aaKnown RBP10.62□□□□□ -0.71
CPNE4-211ENST00000514439 POLKQ9UBT6 870 aa10.62□□□□□ -0.71
CPNE4-211ENST00000514439 PDE4AP27815 886 aa10.61□□□□□ -0.71
CPNE4-211ENST00000514439 NME9Q86XW9 330 aa10.61□□□□□ -0.71
CPNE4-211ENST00000514439 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
CPNE4-211ENST00000514439 PPM1GO15355 546 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-211ENST00000514439 FRAT1Q92837 279 aaPredicted RBP10.61□□□□□ -0.71
CPNE4-211ENST00000514439 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
CPNE4-211ENST00000514439 PRR36Q9H6K5 1346 aa10.6□□□□□ -0.71
CPNE4-211ENST00000514439 ANP32AP39687 249 aaKnown RBP10.6□□□□□ -0.71
CPNE4-211ENST00000514439 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
CPNE4-211ENST00000514439 LRRC7Q96NW7 1537 aa10.6□□□□□ -0.71
CPNE4-211ENST00000514439 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 BCL2L13Q9BXK5 485 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 COG6Q9Y2V7 657 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 MON2Q7Z3U7 1717 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
CPNE4-211ENST00000514439 PNNQ9H307 717 aaKnown RBP10.59□□□□□ -0.71
CPNE4-211ENST00000514439 C3P01024 1663 aa10.59□□□□□ -0.71
CPNE4-211ENST00000514439 FCHSD2O94868 740 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 RIPK4P57078 832 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 AATKQ6ZMQ8 1374 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 IL16Q14005 1332 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-211ENST00000514439 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 CLUAP1Q96AJ1 413 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 SLIT1O75093 1534 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
CPNE4-211ENST00000514439 ARHGAP23Q9P227 1491 aa10.58□□□□□ -0.72
CPNE4-211ENST00000514439 CT47B1P0C2W7 299 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-211ENST00000514439 PRKAR2BP31323 418 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 COG3Q96JB2 828 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 SLC26A8Q96RN1 970 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 RLBP1P12271 317 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
CPNE4-211ENST00000514439 TNNQ9UQP3 1299 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 ITSN1Q15811 1721 aa10.57□□□□□ -0.72
CPNE4-211ENST00000514439 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
CPNE4-211ENST00000514439 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
CPNE4-211ENST00000514439 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
CPNE4-211ENST00000514439 NOP58Q9Y2X3 529 aaKnown RBP10.56□□□□□ -0.72
CPNE4-211ENST00000514439 FER1L4A9Z1Z3 1794 aa10.56□□□□□ -0.72
CPNE4-211ENST00000514439 IGHDP01880 384 aa10.56□□□□□ -0.72
CPNE4-211ENST00000514439 IL13P35225 146 aa10.56□□□□□ -0.72
CPNE4-211ENST00000514439 TOPAZ1Q8N9V7 1692 aa10.55□□□□□ -0.72
CPNE4-211ENST00000514439 HMOX1P09601 288 aa10.55□□□□□ -0.72
CPNE4-211ENST00000514439 RRS1Q15050 365 aaKnown RBP10.55□□□□□ -0.72
CPNE4-211ENST00000514439 NUTM2FA1L443 756 aa10.55□□□□□ -0.72
CPNE4-211ENST00000514439 NEFMP07197 916 aa10.55□□□□□ -0.72
CPNE4-211ENST00000514439 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
CPNE4-211ENST00000514439 NPM2Q86SE8 214 aaKnown RBP10.55□□□□□ -0.72
CPNE4-211ENST00000514439 NRKQ7Z2Y5 1582 aa10.54□□□□□ -0.72
CPNE4-211ENST00000514439 PHACTR3Q96KR7 559 aa10.54□□□□□ -0.72
CPNE4-211ENST00000514439 AMOTL2Q9Y2J4 779 aa10.54□□□□□ -0.72
CPNE4-211ENST00000514439 ACEP12821 1306 aa10.54□□□□□ -0.72
CPNE4-211ENST00000514439 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 AAMPQ13685 434 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 NFE2L2Q16236 605 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 SMC4Q9NTJ3 1288 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 TTC21BQ7Z4L5 1316 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 USP6P35125 1406 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-211ENST00000514439 RGS3P49796 1198 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
CPNE4-211ENST00000514439 THEMISQ8N1K5 641 aaPredicted RBP10.53□□□□□ -0.72
CPNE4-211ENST00000514439 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.72
CPNE4-211ENST00000514439 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.72
CPNE4-211ENST00000514439 OVOS2A0A0J9YW53 1432 aa10.52□□□□□ -0.73
CPNE4-211ENST00000514439 OVOS2Q6IE36 1432 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms