RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 ADGRF5Q8IZF2 1346 aa15.88■□□□□ 0.13
PRDM16-208ENST00000514189 NUP160Q12769 1436 aa15.87■□□□□ 0.13
PRDM16-208ENST00000514189 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
PRDM16-208ENST00000514189 PSME1Q06323 249 aa15.87■□□□□ 0.13
PRDM16-208ENST00000514189 PDE4CQ08493 712 aa15.87■□□□□ 0.13
PRDM16-208ENST00000514189 LARP6Q9BRS8 491 aaKnown RBP15.86■□□□□ 0.13
PRDM16-208ENST00000514189 APPP05067 770 aa15.86■□□□□ 0.13
PRDM16-208ENST00000514189 G3BP1Q13283 466 aaKnown RBP eCLIP15.86■□□□□ 0.13
PRDM16-208ENST00000514189 MCM10Q7L590 875 aa15.85■□□□□ 0.13
PRDM16-208ENST00000514189 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
PRDM16-208ENST00000514189 GRPEL1Q9HAV7 217 aa15.85■□□□□ 0.13
PRDM16-208ENST00000514189 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
PRDM16-208ENST00000514189 NEXNQ0ZGT2 675 aa15.85■□□□□ 0.13
PRDM16-208ENST00000514189 CSPP1Q1MSJ5 1256 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 STK11IPQ8N1F8 1099 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 SIL1Q9H173 461 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 PCDHB15Q9Y5E8 787 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
PRDM16-208ENST00000514189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
PRDM16-208ENST00000514189 SYTL4Q96C24 671 aaPredicted RBP15.83■□□□□ 0.13
PRDM16-208ENST00000514189 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.12
PRDM16-208ENST00000514189 F6X3S4 739 aa15.83■□□□□ 0.12
PRDM16-208ENST00000514189 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
PRDM16-208ENST00000514189 STK3Q13188 491 aa15.83■□□□□ 0.12
PRDM16-208ENST00000514189 RUFY2Q8WXA3 655 aa15.83■□□□□ 0.12
PRDM16-208ENST00000514189 HDAC5Q9UQL6 1122 aa15.83■□□□□ 0.12
PRDM16-208ENST00000514189 RBM33Q96EV2 1170 aaKnown RBP15.82■□□□□ 0.12
PRDM16-208ENST00000514189 TRIM27P14373 513 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 ABTB2Q8N961 1025 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 ATP10BO94823 1461 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 K7ELQ4 463 aaPredicted RBP15.82■□□□□ 0.12
PRDM16-208ENST00000514189 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
PRDM16-208ENST00000514189 TSHZ3Q63HK5 1081 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
PRDM16-208ENST00000514189 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 SEC24BO95487 1268 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 RIC3Q7Z5B4 369 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
PRDM16-208ENST00000514189 CLSTN1O94985 981 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 STAC3Q96MF2 364 aa15.81■□□□□ 0.12
PRDM16-208ENST00000514189 ESPNB1AK53 854 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 ATP2B1P20020 1258 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
PRDM16-208ENST00000514189 CHMP4AQ9BY43 222 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
PRDM16-208ENST00000514189 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 CPLX1O14810 134 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
PRDM16-208ENST00000514189 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 FSD1Q9BTV5 496 aa15.79■□□□□ 0.12
PRDM16-208ENST00000514189 SSFA2P28290 1259 aa15.78■□□□□ 0.12
PRDM16-208ENST00000514189 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
PRDM16-208ENST00000514189 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
PRDM16-208ENST00000514189 RABEP1Q15276 862 aa15.78■□□□□ 0.12
PRDM16-208ENST00000514189 DNAJC2Q99543 621 aaKnown RBP15.78■□□□□ 0.12
PRDM16-208ENST00000514189 NUTM1Q86Y26 1132 aa15.78■□□□□ 0.12
PRDM16-208ENST00000514189 NME9Q86XW9 330 aa15.77■□□□□ 0.12
PRDM16-208ENST00000514189 PANK2Q9BZ23 570 aa15.77■□□□□ 0.12
PRDM16-208ENST00000514189 RPRD2Q5VT52 1461 aaKnown RBP15.77■□□□□ 0.12
PRDM16-208ENST00000514189 GNAI2P04899 355 aa15.77■□□□□ 0.12
PRDM16-208ENST00000514189 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
PRDM16-208ENST00000514189 TPM4P67936 248 aa15.77■□□□□ 0.11
PRDM16-208ENST00000514189 AAMPQ13685 434 aa15.77■□□□□ 0.11
PRDM16-208ENST00000514189 RLBP1P12271 317 aa15.76■□□□□ 0.11
PRDM16-208ENST00000514189 WASHC4Q2M389 1173 aa15.76■□□□□ 0.11
PRDM16-208ENST00000514189 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
PRDM16-208ENST00000514189 CWC27Q6UX04 472 aaKnown RBP15.76■□□□□ 0.11
PRDM16-208ENST00000514189 HOMER1Q86YM7 354 aa15.76■□□□□ 0.11
PRDM16-208ENST00000514189 SYCE3A1L190 88 aa15.76■□□□□ 0.11
PRDM16-208ENST00000514189 GNAI3P08754 354 aa15.76■□□□□ 0.11
PRDM16-208ENST00000514189 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
PRDM16-208ENST00000514189 SDF4Q9BRK5 362 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 ERC2O15083 957 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 SASS6Q6UVJ0 657 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 SRGAP3O43295 1099 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 FBXO31Q5XUX0 539 aaPredicted RBP15.75■□□□□ 0.11
PRDM16-208ENST00000514189 KIF14Q15058 1648 aa15.75■□□□□ 0.11
PRDM16-208ENST00000514189 PTPN23Q9H3S7 1636 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 PPFIA3O75145 1194 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 MTMR7Q9Y216 660 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 CD109Q6YHK3 1445 aa15.74■□□□□ 0.11
PRDM16-208ENST00000514189 ROCK1Q13464 1354 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 RNF20Q5VTR2 975 aa15.73■□□□□ 0.11
PRDM16-208ENST00000514189 TNPO1Q92973 898 aaKnown RBP15.73■□□□□ 0.11
PRDM16-208ENST00000514189 MYL6BP14649 208 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms