RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NCKAP5LQ9HCH0 1330 aa19.74■□□□□ 0.75
VCAN-211ENST00000513984 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
VCAN-211ENST00000513984 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
VCAN-211ENST00000513984 NKTRP30414 1462 aaKnown RBP19.74■□□□□ 0.75
VCAN-211ENST00000513984 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
VCAN-211ENST00000513984 ANKLE2Q86XL3 938 aa19.73■□□□□ 0.75
VCAN-211ENST00000513984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.73■□□□□ 0.75
VCAN-211ENST00000513984 FMN2Q9NZ56 1722 aa19.73■□□□□ 0.75
VCAN-211ENST00000513984 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
VCAN-211ENST00000513984 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
VCAN-211ENST00000513984 DUSP27Q5VZP5 1158 aa19.71■□□□□ 0.75
VCAN-211ENST00000513984 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.74
VCAN-211ENST00000513984 RRP1P56182 461 aaKnown RBP19.7■□□□□ 0.74
VCAN-211ENST00000513984 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
VCAN-211ENST00000513984 SLFN5Q08AF3 891 aa19.69■□□□□ 0.74
VCAN-211ENST00000513984 AATKQ6ZMQ8 1374 aa19.69■□□□□ 0.74
VCAN-211ENST00000513984 KCNA6P17658 529 aa19.68■□□□□ 0.74
VCAN-211ENST00000513984 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
VCAN-211ENST00000513984 NME9Q86XW9 330 aa19.68■□□□□ 0.74
VCAN-211ENST00000513984 USP6P35125 1406 aa19.68■□□□□ 0.74
VCAN-211ENST00000513984 ANKARQ7Z5J8 1434 aa19.67■□□□□ 0.74
VCAN-211ENST00000513984 CDK12Q9NYV4 1490 aaPredicted RBP19.67■□□□□ 0.74
VCAN-211ENST00000513984 ACEP12821 1306 aa19.66■□□□□ 0.74
VCAN-211ENST00000513984 U2AF1L5P0DN76 240 aaPredicted RBP19.66■□□□□ 0.74
VCAN-211ENST00000513984 U2AF1Q01081 240 aaKnown RBP eCLIP19.66■□□□□ 0.74
VCAN-211ENST00000513984 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
VCAN-211ENST00000513984 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
VCAN-211ENST00000513984 TCP11L2Q8N4U5 519 aa19.65■□□□□ 0.74
VCAN-211ENST00000513984 NPHP4O75161 1426 aaPredicted RBP19.65■□□□□ 0.74
VCAN-211ENST00000513984 SSH2Q76I76 1423 aa19.65■□□□□ 0.74
VCAN-211ENST00000513984 E9PSI1 815 aa19.65■□□□□ 0.74
VCAN-211ENST00000513984 WWC1Q8IX03 1113 aa19.65■□□□□ 0.74
VCAN-211ENST00000513984 DIAPH1O60610 1272 aaKnown RBP19.64■□□□□ 0.73
VCAN-211ENST00000513984 CCDC27Q2M243 656 aa19.64■□□□□ 0.73
VCAN-211ENST00000513984 COG3Q96JB2 828 aa19.64■□□□□ 0.73
VCAN-211ENST00000513984 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
VCAN-211ENST00000513984 OVOS2A0A0J9YW53 1432 aa19.63■□□□□ 0.73
VCAN-211ENST00000513984 OVOS2Q6IE36 1432 aa19.63■□□□□ 0.73
VCAN-211ENST00000513984 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
VCAN-211ENST00000513984 NWD1Q149M9 1564 aa19.62■□□□□ 0.73
VCAN-211ENST00000513984 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
VCAN-211ENST00000513984 PLEKHF1Q96S99 279 aa19.62■□□□□ 0.73
VCAN-211ENST00000513984 ZRANB1Q9UGI0 708 aa19.62■□□□□ 0.73
VCAN-211ENST00000513984 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
VCAN-211ENST00000513984 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
VCAN-211ENST00000513984 DMRT2Q9Y5R5 561 aa19.6■□□□□ 0.73
VCAN-211ENST00000513984 USP54Q70EL1 1684 aa19.6■□□□□ 0.73
VCAN-211ENST00000513984 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
VCAN-211ENST00000513984 TTC21AQ8NDW8 1320 aa19.58■□□□□ 0.73
VCAN-211ENST00000513984 FBLN1P23142 703 aa19.58■□□□□ 0.73
VCAN-211ENST00000513984 WDR63Q8IWG1 891 aa19.58■□□□□ 0.73
VCAN-211ENST00000513984 RRP7AQ9Y3A4 280 aaKnown RBP19.58■□□□□ 0.73
VCAN-211ENST00000513984 EMILIN1Q9Y6C2 1016 aa19.58■□□□□ 0.73
VCAN-211ENST00000513984 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.72
VCAN-211ENST00000513984 ADGRL3Q9HAR2 1447 aa19.57■□□□□ 0.72
VCAN-211ENST00000513984 USP31Q70CQ4 1352 aa19.56■□□□□ 0.72
VCAN-211ENST00000513984 NEUROD2Q15784 382 aa19.56■□□□□ 0.72
VCAN-211ENST00000513984 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
VCAN-211ENST00000513984 MARF1Q9Y4F3 1742 aaKnown RBP19.56■□□□□ 0.72
VCAN-211ENST00000513984 PEAK1Q9H792 1746 aa19.55■□□□□ 0.72
VCAN-211ENST00000513984 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
VCAN-211ENST00000513984 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
VCAN-211ENST00000513984 FCHSD2O94868 740 aa19.55■□□□□ 0.72
VCAN-211ENST00000513984 PMFBP1Q8TBY8 1022 aa19.54■□□□□ 0.72
VCAN-211ENST00000513984 IL13P35225 146 aa19.53■□□□□ 0.72
VCAN-211ENST00000513984 TMPOP42166 694 aaKnown RBP19.53■□□□□ 0.72
VCAN-211ENST00000513984 NGDNQ8NEJ9 315 aaKnown RBP19.53■□□□□ 0.72
VCAN-211ENST00000513984 RRS1Q15050 365 aaKnown RBP19.52■□□□□ 0.72
VCAN-211ENST00000513984 RSPH6AQ9H0K4 717 aa19.52■□□□□ 0.72
VCAN-211ENST00000513984 DLG5Q8TDM6 1919 aa19.51■□□□□ 0.71
VCAN-211ENST00000513984 RGPD1P0DJD0 1748 aa19.51■□□□□ 0.71
VCAN-211ENST00000513984 PLIN1O60240 522 aa19.51■□□□□ 0.71
VCAN-211ENST00000513984 EXOC6Q8TAG9 804 aa19.51■□□□□ 0.71
VCAN-211ENST00000513984 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
VCAN-211ENST00000513984 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.49■□□□□ 0.71
VCAN-211ENST00000513984 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
VCAN-211ENST00000513984 TRIM35Q9UPQ4 493 aa19.48■□□□□ 0.71
VCAN-211ENST00000513984 PRKAR2BP31323 418 aa19.47■□□□□ 0.71
VCAN-211ENST00000513984 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
VCAN-211ENST00000513984 IL16Q14005 1332 aa19.47■□□□□ 0.71
VCAN-211ENST00000513984 NEFMP07197 916 aa19.45■□□□□ 0.7
VCAN-211ENST00000513984 RIPK4P57078 832 aa19.44■□□□□ 0.7
VCAN-211ENST00000513984 CRBNQ96SW2 442 aa19.44■□□□□ 0.7
VCAN-211ENST00000513984 PHF8Q9UPP1 1060 aa19.44■□□□□ 0.7
VCAN-211ENST00000513984 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
VCAN-211ENST00000513984 HMOX1P09601 288 aa19.44■□□□□ 0.7
VCAN-211ENST00000513984 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
VCAN-211ENST00000513984 EIF4A2Q14240 407 aaKnown RBP19.42■□□□□ 0.7
VCAN-211ENST00000513984 NFE2L2Q16236 605 aa19.42■□□□□ 0.7
VCAN-211ENST00000513984 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
VCAN-211ENST00000513984 SBNO1A3KN83 1393 aa19.42■□□□□ 0.7
VCAN-211ENST00000513984 FLT4P35916 1363 aa19.42■□□□□ 0.7
VCAN-211ENST00000513984 BCAR3O75815 825 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 LTN1O94822 1766 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 KIF1AQ12756 1690 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 MAP3K19Q56UN5 1328 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 FANCIQ9NVI1 1328 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
VCAN-211ENST00000513984 KIF24Q5T7B8 1368 aa19.4■□□□□ 0.7
VCAN-211ENST00000513984 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms