RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
POLR2J3-218ENST00000513506 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
POLR2J3-218ENST00000513506 ALS2Q96Q42 1657 aa21.59■■□□□ 1.05
POLR2J3-218ENST00000513506 KTN1Q86UP2 1357 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-218ENST00000513506 TTC21AQ8NDW8 1320 aa21.58■■□□□ 1.05
POLR2J3-218ENST00000513506 EDC4Q6P2E9 1401 aaKnown RBP21.58■■□□□ 1.05
POLR2J3-218ENST00000513506 AKAP12Q02952 1782 aa21.58■■□□□ 1.04
POLR2J3-218ENST00000513506 TTC21BQ7Z4L5 1316 aa21.57■■□□□ 1.04
POLR2J3-218ENST00000513506 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
POLR2J3-218ENST00000513506 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
POLR2J3-218ENST00000513506 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
POLR2J3-218ENST00000513506 MYOM1P52179 1685 aa21.55■■□□□ 1.04
POLR2J3-218ENST00000513506 MON2Q7Z3U7 1717 aa21.55■■□□□ 1.04
POLR2J3-218ENST00000513506 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
POLR2J3-218ENST00000513506 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
POLR2J3-218ENST00000513506 USP19O94966 1318 aa21.54■■□□□ 1.04
POLR2J3-218ENST00000513506 CARD14Q9BXL6 1004 aa21.52■■□□□ 1.04
POLR2J3-218ENST00000513506 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
POLR2J3-218ENST00000513506 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
POLR2J3-218ENST00000513506 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
POLR2J3-218ENST00000513506 LRP6O75581 1613 aa21.49■■□□□ 1.03
POLR2J3-218ENST00000513506 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
POLR2J3-218ENST00000513506 PANK3Q9H999 370 aa21.46■■□□□ 1.03
POLR2J3-218ENST00000513506 PIK3C2AO00443 1686 aa21.46■■□□□ 1.03
POLR2J3-218ENST00000513506 SLIT3O75094 1523 aa21.45■■□□□ 1.02
POLR2J3-218ENST00000513506 FYB1O15117 783 aa21.45■■□□□ 1.02
POLR2J3-218ENST00000513506 NLRP6P59044 892 aa21.45■■□□□ 1.02
POLR2J3-218ENST00000513506 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
POLR2J3-218ENST00000513506 CRYBG1Q9Y4K1 1723 aa21.45■■□□□ 1.02
POLR2J3-218ENST00000513506 PER1O15534 1290 aaPredicted RBP21.44■■□□□ 1.02
POLR2J3-218ENST00000513506 OVOS2A0A0J9YW53 1432 aa21.44■■□□□ 1.02
POLR2J3-218ENST00000513506 OVOS2Q6IE36 1432 aa21.44■■□□□ 1.02
POLR2J3-218ENST00000513506 GCP02774 474 aa21.43■■□□□ 1.02
POLR2J3-218ENST00000513506 NME9Q86XW9 330 aa21.43■■□□□ 1.02
POLR2J3-218ENST00000513506 CABLES1Q8TDN4 633 aa21.43■■□□□ 1.02
POLR2J3-218ENST00000513506 CPDO75976 1380 aa21.43■■□□□ 1.02
POLR2J3-218ENST00000513506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
POLR2J3-218ENST00000513506 NSD3Q9BZ95 1437 aa21.42■■□□□ 1.02
POLR2J3-218ENST00000513506 FNBP4Q8N3X1 1017 aaPredicted RBP21.41■■□□□ 1.02
POLR2J3-218ENST00000513506 KCNH5Q8NCM2 988 aa21.41■■□□□ 1.02
POLR2J3-218ENST00000513506 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
POLR2J3-218ENST00000513506 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
POLR2J3-218ENST00000513506 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
POLR2J3-218ENST00000513506 MARF1Q9Y4F3 1742 aaKnown RBP21.39■■□□□ 1.01
POLR2J3-218ENST00000513506 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-218ENST00000513506 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-218ENST00000513506 NUTM2GQ5VZR2 741 aa21.39■■□□□ 1.01
POLR2J3-218ENST00000513506 NUTM2AQ8IVF1 878 aaPredicted RBP21.39■■□□□ 1.01
POLR2J3-218ENST00000513506 NPC1L1Q9UHC9 1359 aa21.38■■□□□ 1.01
POLR2J3-218ENST00000513506 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
POLR2J3-218ENST00000513506 NSD2O96028 1365 aa21.37■■□□□ 1.01
POLR2J3-218ENST00000513506 PHRF1Q9P1Y6 1649 aaKnown RBP21.37■■□□□ 1.01
POLR2J3-218ENST00000513506 AMER1Q5JTC6 1135 aaPredicted RBP21.37■■□□□ 1.01
POLR2J3-218ENST00000513506 SLIT2O94813 1529 aa21.36■■□□□ 1.01
POLR2J3-218ENST00000513506 NFAT5O94916 1531 aa21.36■■□□□ 1.01
POLR2J3-218ENST00000513506 COG3Q96JB2 828 aa21.36■■□□□ 1.01
POLR2J3-218ENST00000513506 FAM83GA6ND36 823 aa21.35■■□□□ 1.01
POLR2J3-218ENST00000513506 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
POLR2J3-218ENST00000513506 ARHGEF25Q86VW2 580 aa21.35■■□□□ 1.01
POLR2J3-218ENST00000513506 RGS17Q9UGC6 210 aaPredicted RBP21.34■■□□□ 1.01
POLR2J3-218ENST00000513506 KNSTRNQ9Y448 316 aa21.34■■□□□ 1.01
POLR2J3-218ENST00000513506 KIAA0232Q92628 1395 aa21.34■■□□□ 1.01
POLR2J3-218ENST00000513506 HAP1P54257 671 aaPredicted RBP21.33■■□□□ 1.01
POLR2J3-218ENST00000513506 AATKQ6ZMQ8 1374 aa21.33■■□□□ 1
POLR2J3-218ENST00000513506 GGNBP2Q9H3C7 697 aa21.32■■□□□ 1
POLR2J3-218ENST00000513506 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
POLR2J3-218ENST00000513506 ABCC6O95255 1503 aa21.31■■□□□ 1
POLR2J3-218ENST00000513506 MEX3CQ5U5Q3 659 aaKnown RBP21.31■■□□□ 1
POLR2J3-218ENST00000513506 NGLY1Q96IV0 654 aa21.31■■□□□ 1
POLR2J3-218ENST00000513506 C8orf37Q96NL8 207 aa21.31■■□□□ 1
POLR2J3-218ENST00000513506 PRDM11Q9NQV5 511 aa21.3■■□□□ 1
POLR2J3-218ENST00000513506 AFF2P51816 1311 aa21.29■■□□□ 1
POLR2J3-218ENST00000513506 COL14A1Q05707 1796 aaKnown RBP21.29■■□□□ 1
POLR2J3-218ENST00000513506 ZNF316A6NFI3 1004 aaPredicted RBP21.29■■□□□ 1
POLR2J3-218ENST00000513506 ZC3H6P61129 1189 aaKnown RBP21.29■■□□□ 1
POLR2J3-218ENST00000513506 ZNF772Q68DY9 489 aaPredicted RBP21.29■■□□□ 1
POLR2J3-218ENST00000513506 KIF24Q5T7B8 1368 aa21.28■■□□□ 1
POLR2J3-218ENST00000513506 UNC5CLQ8IV45 518 aa21.27■■□□□ 1
POLR2J3-218ENST00000513506 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
POLR2J3-218ENST00000513506 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
POLR2J3-218ENST00000513506 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
POLR2J3-218ENST00000513506 COL18A1P39060 1754 aa21.25■□□□□ 0.99
POLR2J3-218ENST00000513506 ATRNO75882 1429 aa21.24■□□□□ 0.99
POLR2J3-218ENST00000513506 USP21Q9UK80 565 aa21.24■□□□□ 0.99
POLR2J3-218ENST00000513506 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
POLR2J3-218ENST00000513506 PLEKHG5O94827 1062 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 CHRNA2Q15822 529 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 IP6K1Q92551 441 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 BTG4Q9NY30 223 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 MAP3K19Q56UN5 1328 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 RTL1A6NKG5 1358 aa21.23■□□□□ 0.99
POLR2J3-218ENST00000513506 ANKRD26Q9UPS8 1709 aa21.22■□□□□ 0.99
POLR2J3-218ENST00000513506 VPS72Q15906 364 aa21.22■□□□□ 0.99
POLR2J3-218ENST00000513506 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
POLR2J3-218ENST00000513506 AXIN2Q9Y2T1 843 aa21.22■□□□□ 0.99
POLR2J3-218ENST00000513506 TRPC5Q9UL62 973 aaPredicted RBP21.21■□□□□ 0.99
POLR2J3-218ENST00000513506 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
POLR2J3-218ENST00000513506 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
POLR2J3-218ENST00000513506 POTEAQ6S8J7 498 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms