RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 CCNB3Q8WWL7 1395 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 WASHC2CQ9Y4E1 1318 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 TRIM66O15016 1216 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 MAP3K7O43318 606 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 ARSIQ5FYB1 569 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 UBR1Q8IWV7 1749 aa7.88□□□□□ -1.15
HTT-211ENST00000513326 SCAF11Q99590 1463 aaKnown RBP7.87□□□□□ -1.15
HTT-211ENST00000513326 IRF6O14896 467 aa7.87□□□□□ -1.15
HTT-211ENST00000513326 RTEL1-TNFRSF6BF6WH68 1400 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 TMEM94Q12767 1356 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 MROH1Q8NDA8 1641 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 SNPHO15079 494 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 NUDT7P0C024 238 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 FOSBP53539 338 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 GPR153Q6NV75 609 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 ARHGAP23Q9P227 1491 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 SRCAPQ6ZRS2 3230 aa7.86□□□□□ -1.15
HTT-211ENST00000513326 FECHP22830 423 aa7.85□□□□□ -1.15
HTT-211ENST00000513326 KHSRPQ92945 711 aaKnown RBP eCLIP7.85□□□□□ -1.15
HTT-211ENST00000513326 NPDC1Q9NQX5 325 aaPredicted RBP7.85□□□□□ -1.15
HTT-211ENST00000513326 CCDC141Q6ZP82 1450 aa7.85□□□□□ -1.15
HTT-211ENST00000513326 CEP152O94986 1710 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 CFAP65Q6ZU64 1925 aaKnown RBP7.84□□□□□ -1.15
HTT-211ENST00000513326 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 PDE4DQ08499 809 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 ZNF454Q8N9F8 522 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 CCDC102AQ96A19 550 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 CDHR5Q9HBB8 845 aa7.84□□□□□ -1.15
HTT-211ENST00000513326 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
HTT-211ENST00000513326 PHLPP1O60346 1717 aa7.83□□□□□ -1.16
HTT-211ENST00000513326 SLIT1O75093 1534 aa7.83□□□□□ -1.16
HTT-211ENST00000513326 COL16A1Q07092 1604 aaPredicted RBP7.83□□□□□ -1.16
HTT-211ENST00000513326 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
HTT-211ENST00000513326 TXNDC2Q86VQ3 553 aa7.83□□□□□ -1.16
HTT-211ENST00000513326 MTUS2Q5JR59 1369 aa7.83□□□□□ -1.16
HTT-211ENST00000513326 PIK3C2BO00750 1634 aa7.81□□□□□ -1.16
HTT-211ENST00000513326 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
HTT-211ENST00000513326 C6orf132Q5T0Z8 1188 aa7.81□□□□□ -1.16
HTT-211ENST00000513326 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
HTT-211ENST00000513326 GPBP1L1Q9HC44 474 aaPredicted RBP7.81□□□□□ -1.16
HTT-211ENST00000513326 JCADQ9P266 1359 aa7.81□□□□□ -1.16
HTT-211ENST00000513326 EHBP1L1Q8N3D4 1523 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 AMHR2Q16671 573 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 SLC26A8Q96RN1 970 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 LHX6Q9UPM6 363 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 NWD1Q149M9 1564 aa7.8□□□□□ -1.16
HTT-211ENST00000513326 TET3O43151 1660 aa7.79□□□□□ -1.16
HTT-211ENST00000513326 PRDM15P57071 1507 aaPredicted RBP7.79□□□□□ -1.16
HTT-211ENST00000513326 PPP4R3BQ5MIZ7 849 aa7.79□□□□□ -1.16
HTT-211ENST00000513326 ADAM33Q9BZ11 813 aa7.79□□□□□ -1.16
HTT-211ENST00000513326 TMEM2Q9UHN6 1383 aa7.79□□□□□ -1.16
HTT-211ENST00000513326 LRRC9Q6ZRR7 1453 aa7.79□□□□□ -1.16
HTT-211ENST00000513326 CEP162Q5TB80 1403 aa7.78□□□□□ -1.16
HTT-211ENST00000513326 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
HTT-211ENST00000513326 KCNA6P17658 529 aa7.78□□□□□ -1.16
HTT-211ENST00000513326 PROSER2Q86WR7 435 aaPredicted RBP7.78□□□□□ -1.16
HTT-211ENST00000513326 OTUD5Q96G74 571 aa7.78□□□□□ -1.16
HTT-211ENST00000513326 ARHGEF5Q12774 1597 aa7.78□□□□□ -1.16
HTT-211ENST00000513326 RGS12O14924 1447 aa7.78□□□□□ -1.16
HTT-211ENST00000513326 SLAIN2Q9P270 581 aa7.77□□□□□ -1.17
HTT-211ENST00000513326 KDM5AP29375 1690 aaKnown RBP7.76□□□□□ -1.17
HTT-211ENST00000513326 MAST1Q9Y2H9 1570 aa7.76□□□□□ -1.17
HTT-211ENST00000513326 SETBP1Q9Y6X0 1596 aa7.76□□□□□ -1.17
HTT-211ENST00000513326 NKTRP30414 1462 aaKnown RBP7.76□□□□□ -1.17
HTT-211ENST00000513326 MEX3CQ5U5Q3 659 aaKnown RBP7.76□□□□□ -1.17
HTT-211ENST00000513326 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
HTT-211ENST00000513326 EIF2AK4Q9P2K8 1649 aaKnown RBP7.76□□□□□ -1.17
HTT-211ENST00000513326 SHPRHQ149N8 1683 aa7.76□□□□□ -1.17
HTT-211ENST00000513326 DIP2AQ14689 1571 aa7.76□□□□□ -1.17
HTT-211ENST00000513326 MSH6P52701 1360 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 EFCAB6Q5THR3 1501 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 RXRBP28702 533 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
HTT-211ENST00000513326 PARP9Q8IXQ6 854 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 IL27Q8NEV9 243 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 BCL2L12Q9HB09 334 aa7.75□□□□□ -1.17
HTT-211ENST00000513326 AHDC1Q5TGY3 1603 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 OATP04181 439 aa7.74□□□□□ -1.17
HTT-211ENST00000513326 ZNF772Q68DY9 489 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 LHX8Q68G74 356 aa7.74□□□□□ -1.17
HTT-211ENST00000513326 PADI6Q6TGC4 694 aa7.74□□□□□ -1.17
HTT-211ENST00000513326 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 EID1Q9Y6B2 187 aa7.74□□□□□ -1.17
HTT-211ENST00000513326 SPATA31A6Q5VVP1 1343 aa7.74□□□□□ -1.17
HTT-211ENST00000513326 CDK12Q9NYV4 1490 aaPredicted RBP7.74□□□□□ -1.17
HTT-211ENST00000513326 ARHGAP31Q2M1Z3 1444 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 FGD6Q6ZV73 1430 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 PRSS12P56730 875 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 IDI1Q13907 227 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 TTC13Q8NBP0 860 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 AFF2P51816 1311 aa7.73□□□□□ -1.17
HTT-211ENST00000513326 PTPREP23469 700 aa7.72□□□□□ -1.17
HTT-211ENST00000513326 CLCN1P35523 988 aa7.72□□□□□ -1.17
HTT-211ENST00000513326 CDCA7LQ96GN5 454 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms