RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ANKRD36BQ8N2N9 1353 aa29.11■■■□□ 2.25
NEIL3-202ENST00000513321 SSH2Q76I76 1423 aa29.11■■■□□ 2.25
NEIL3-202ENST00000513321 WASHC2AQ641Q2 1341 aa29.1■■■□□ 2.25
NEIL3-202ENST00000513321 TTC21BQ7Z4L5 1316 aa29.1■■■□□ 2.25
NEIL3-202ENST00000513321 ARHGEF10O15013 1369 aa29.1■■■□□ 2.25
NEIL3-202ENST00000513321 CCDC7Q96M83 1385 aa29.1■■■□□ 2.25
NEIL3-202ENST00000513321 AKAP12Q02952 1782 aa29.09■■■□□ 2.25
NEIL3-202ENST00000513321 ABTB2Q8N961 1025 aa29.09■■■□□ 2.25
NEIL3-202ENST00000513321 SPATA31A6Q5VVP1 1343 aa29.08■■■□□ 2.25
NEIL3-202ENST00000513321 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
NEIL3-202ENST00000513321 PLEKHG5O94827 1062 aa29.07■■■□□ 2.24
NEIL3-202ENST00000513321 NUTM2GQ5VZR2 741 aa29.07■■■□□ 2.24
NEIL3-202ENST00000513321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.07■■■□□ 2.24
NEIL3-202ENST00000513321 MYOM1P52179 1685 aa29.06■■■□□ 2.24
NEIL3-202ENST00000513321 NUTM2BA6NNL0 878 aaPredicted RBP29.06■■■□□ 2.24
NEIL3-202ENST00000513321 NUTM2EB1AL46 878 aaPredicted RBP29.06■■■□□ 2.24
NEIL3-202ENST00000513321 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
NEIL3-202ENST00000513321 TTC21AQ8NDW8 1320 aa29.05■■■□□ 2.24
NEIL3-202ENST00000513321 EDC4Q6P2E9 1401 aaKnown RBP29.05■■■□□ 2.24
NEIL3-202ENST00000513321 CARD14Q9BXL6 1004 aa29.04■■■□□ 2.24
NEIL3-202ENST00000513321 ALS2Q96Q42 1657 aa29.04■■■□□ 2.24
NEIL3-202ENST00000513321 CABLES1Q8TDN4 633 aa29.04■■■□□ 2.24
NEIL3-202ENST00000513321 PANK3Q9H999 370 aa29.04■■■□□ 2.24
NEIL3-202ENST00000513321 MON2Q7Z3U7 1717 aa29.03■■■□□ 2.24
NEIL3-202ENST00000513321 NLRP6P59044 892 aa29.01■■■□□ 2.23
NEIL3-202ENST00000513321 NLRP13Q86W25 1043 aa29■■■□□ 2.23
NEIL3-202ENST00000513321 COL22A1Q8NFW1 1626 aaPredicted RBP29■■■□□ 2.23
NEIL3-202ENST00000513321 NME9Q86XW9 330 aa28.99■■■□□ 2.23
NEIL3-202ENST00000513321 NRKQ7Z2Y5 1582 aa28.98■■■□□ 2.23
NEIL3-202ENST00000513321 HAP1P54257 671 aaPredicted RBP28.98■■■□□ 2.23
NEIL3-202ENST00000513321 ZRANB1Q9UGI0 708 aa28.97■■■□□ 2.23
NEIL3-202ENST00000513321 ADAMTS2O95450 1211 aa28.95■■■□□ 2.23
NEIL3-202ENST00000513321 NSD3Q9BZ95 1437 aa28.95■■■□□ 2.22
NEIL3-202ENST00000513321 LRP6O75581 1613 aa28.95■■■□□ 2.22
NEIL3-202ENST00000513321 PIK3C2AO00443 1686 aa28.93■■■□□ 2.22
NEIL3-202ENST00000513321 FYB1O15117 783 aa28.93■■■□□ 2.22
NEIL3-202ENST00000513321 MEX3CQ5U5Q3 659 aaKnown RBP28.93■■■□□ 2.22
NEIL3-202ENST00000513321 MED1Q15648 1581 aaPredicted RBP28.93■■■□□ 2.22
NEIL3-202ENST00000513321 USP19O94966 1318 aa28.92■■■□□ 2.22
NEIL3-202ENST00000513321 USP31Q70CQ4 1352 aa28.92■■■□□ 2.22
NEIL3-202ENST00000513321 GCP02774 474 aa28.9■■■□□ 2.22
NEIL3-202ENST00000513321 GGNBP2Q9H3C7 697 aa28.89■■■□□ 2.21
NEIL3-202ENST00000513321 CGNL1Q0VF96 1302 aa28.88■■■□□ 2.21
NEIL3-202ENST00000513321 KNSTRNQ9Y448 316 aa28.88■■■□□ 2.21
NEIL3-202ENST00000513321 COG3Q96JB2 828 aa28.87■■■□□ 2.21
NEIL3-202ENST00000513321 ZNF316A6NFI3 1004 aaPredicted RBP28.85■■■□□ 2.21
NEIL3-202ENST00000513321 PER1O15534 1290 aaPredicted RBP28.85■■■□□ 2.21
NEIL3-202ENST00000513321 ZC3H6P61129 1189 aaKnown RBP28.85■■■□□ 2.21
NEIL3-202ENST00000513321 C8orf37Q96NL8 207 aa28.85■■■□□ 2.21
NEIL3-202ENST00000513321 SOX12O15370 315 aa28.84■■■□□ 2.21
NEIL3-202ENST00000513321 KCNH5Q8NCM2 988 aa28.84■■■□□ 2.21
NEIL3-202ENST00000513321 NGLY1Q96IV0 654 aa28.84■■■□□ 2.21
NEIL3-202ENST00000513321 CRYBG1Q9Y4K1 1723 aa28.84■■■□□ 2.21
NEIL3-202ENST00000513321 ABCA3Q99758 1704 aa28.83■■■□□ 2.21
NEIL3-202ENST00000513321 OVOS2A0A0J9YW53 1432 aa28.83■■■□□ 2.21
NEIL3-202ENST00000513321 OVOS2Q6IE36 1432 aa28.83■■■□□ 2.21
NEIL3-202ENST00000513321 SLIT3O75094 1523 aa28.82■■■□□ 2.2
NEIL3-202ENST00000513321 PHRF1Q9P1Y6 1649 aaKnown RBP28.81■■■□□ 2.2
NEIL3-202ENST00000513321 FAM83GA6ND36 823 aa28.81■■■□□ 2.2
NEIL3-202ENST00000513321 PRDM11Q9NQV5 511 aa28.8■■■□□ 2.2
NEIL3-202ENST00000513321 KIAA0232Q92628 1395 aa28.8■■■□□ 2.2
NEIL3-202ENST00000513321 MARF1Q9Y4F3 1742 aaKnown RBP28.8■■■□□ 2.2
NEIL3-202ENST00000513321 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
NEIL3-202ENST00000513321 AMER1Q5JTC6 1135 aaPredicted RBP28.78■■■□□ 2.2
NEIL3-202ENST00000513321 PHF23Q9BUL5 403 aaPredicted RBP28.78■■■□□ 2.2
NEIL3-202ENST00000513321 USP54Q70EL1 1684 aa28.77■■■□□ 2.2
NEIL3-202ENST00000513321 CHRNA2Q15822 529 aa28.77■■■□□ 2.2
NEIL3-202ENST00000513321 CPDO75976 1380 aa28.76■■■□□ 2.19
NEIL3-202ENST00000513321 AFF2P51816 1311 aa28.76■■■□□ 2.19
NEIL3-202ENST00000513321 ZBTB7CA1YPR0 619 aa28.76■■■□□ 2.19
NEIL3-202ENST00000513321 FNBP4Q8N3X1 1017 aaPredicted RBP28.76■■■□□ 2.19
NEIL3-202ENST00000513321 KIF20BQ96Q89 1820 aa28.76■■■□□ 2.19
NEIL3-202ENST00000513321 ARHGEF25Q86VW2 580 aa28.75■■■□□ 2.19
NEIL3-202ENST00000513321 FBLN1P23142 703 aa28.74■■■□□ 2.19
NEIL3-202ENST00000513321 NSD2O96028 1365 aa28.73■■■□□ 2.19
NEIL3-202ENST00000513321 NFAT5O94916 1531 aa28.73■■■□□ 2.19
NEIL3-202ENST00000513321 RGS17Q9UGC6 210 aaPredicted RBP28.71■■■□□ 2.19
NEIL3-202ENST00000513321 USP21Q9UK80 565 aa28.71■■■□□ 2.19
NEIL3-202ENST00000513321 CC2D1BQ5T0F9 858 aaKnown RBP28.7■■■□□ 2.19
NEIL3-202ENST00000513321 MORC1Q86VD1 984 aa28.7■■■□□ 2.19
NEIL3-202ENST00000513321 BTG4Q9NY30 223 aa28.7■■■□□ 2.19
NEIL3-202ENST00000513321 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
NEIL3-202ENST00000513321 SLIT2O94813 1529 aa28.69■■■□□ 2.18
NEIL3-202ENST00000513321 ZNF772Q68DY9 489 aaPredicted RBP28.69■■■□□ 2.18
NEIL3-202ENST00000513321 TNNT2P45379 298 aaPredicted RBP28.68■■■□□ 2.18
NEIL3-202ENST00000513321 AATKQ6ZMQ8 1374 aa28.68■■■□□ 2.18
NEIL3-202ENST00000513321 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
NEIL3-202ENST00000513321 NPC1L1Q9UHC9 1359 aa28.67■■■□□ 2.18
NEIL3-202ENST00000513321 BCL9LQ86UU0 1499 aa28.66■■■□□ 2.18
NEIL3-202ENST00000513321 RRS1Q15050 365 aaKnown RBP28.66■■■□□ 2.18
NEIL3-202ENST00000513321 UNC5CLQ8IV45 518 aa28.66■■■□□ 2.18
NEIL3-202ENST00000513321 MAP3K19Q56UN5 1328 aa28.66■■■□□ 2.18
NEIL3-202ENST00000513321 AXIN2Q9Y2T1 843 aa28.65■■■□□ 2.18
NEIL3-202ENST00000513321 QTRT2Q9H974 415 aaKnown RBP28.63■■■□□ 2.17
NEIL3-202ENST00000513321 AMPHP49418 695 aa28.62■■■□□ 2.17
NEIL3-202ENST00000513321 EVA1CP58658 441 aa28.62■■■□□ 2.17
NEIL3-202ENST00000513321 ANKRD26Q9UPS8 1709 aa28.62■■■□□ 2.17
NEIL3-202ENST00000513321 CAMTA1Q9Y6Y1 1673 aa28.61■■■□□ 2.17
NEIL3-202ENST00000513321 PLCH1Q4KWH8 1693 aa28.61■■■□□ 2.17
NEIL3-202ENST00000513321 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms