RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 ANKRD36BQ8N2N9 1353 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 TULP4Q9NRJ4 1543 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 PRKAR2BP31323 418 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 C1orf115Q9H7X2 142 aa18.67■□□□□ 0.58
DDR1-271ENST00000513240 TERF2IPQ9NYB0 399 aa18.66■□□□□ 0.58
DDR1-271ENST00000513240 DIAPH1O60610 1272 aaKnown RBP18.66■□□□□ 0.58
DDR1-271ENST00000513240 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
DDR1-271ENST00000513240 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
DDR1-271ENST00000513240 QRICH2Q9H0J4 1663 aa18.65■□□□□ 0.58
DDR1-271ENST00000513240 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
DDR1-271ENST00000513240 MYH16Q9H6N6 1097 aa18.65■□□□□ 0.58
DDR1-271ENST00000513240 WDR63Q8IWG1 891 aa18.64■□□□□ 0.58
DDR1-271ENST00000513240 SBNO2Q9Y2G9 1366 aa18.64■□□□□ 0.57
DDR1-271ENST00000513240 FAM83GA6ND36 823 aa18.64■□□□□ 0.57
DDR1-271ENST00000513240 TRIM27P14373 513 aa18.64■□□□□ 0.57
DDR1-271ENST00000513240 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
DDR1-271ENST00000513240 DZIP1LQ8IYY4 767 aaKnown RBP18.63■□□□□ 0.57
DDR1-271ENST00000513240 HECW2Q9P2P5 1572 aa18.63■□□□□ 0.57
DDR1-271ENST00000513240 GLI2P10070 1586 aa18.62■□□□□ 0.57
DDR1-271ENST00000513240 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
DDR1-271ENST00000513240 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
DDR1-271ENST00000513240 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
DDR1-271ENST00000513240 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
DDR1-271ENST00000513240 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
DDR1-271ENST00000513240 USP19O94966 1318 aa18.6■□□□□ 0.57
DDR1-271ENST00000513240 CEBPAP49715 358 aaPredicted RBP18.6■□□□□ 0.57
DDR1-271ENST00000513240 MVPQ14764 893 aaKnown RBP18.6■□□□□ 0.57
DDR1-271ENST00000513240 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
DDR1-271ENST00000513240 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
DDR1-271ENST00000513240 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
DDR1-271ENST00000513240 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.57
DDR1-271ENST00000513240 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.57
DDR1-271ENST00000513240 PPLO60437 1756 aa18.58■□□□□ 0.56
DDR1-271ENST00000513240 NEXMIFQ5QGS0 1516 aa18.58■□□□□ 0.56
DDR1-271ENST00000513240 IFT172Q9UG01 1749 aa18.58■□□□□ 0.56
DDR1-271ENST00000513240 KIAA1210Q9ULL0 1709 aa18.57■□□□□ 0.56
DDR1-271ENST00000513240 KRT24Q2M2I5 525 aa18.57■□□□□ 0.56
DDR1-271ENST00000513240 RBM10P98175 930 aaKnown RBP18.56■□□□□ 0.56
DDR1-271ENST00000513240 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
DDR1-271ENST00000513240 DIP2CQ9Y2E4 1556 aa18.56■□□□□ 0.56
DDR1-271ENST00000513240 TSPOAP1O95153 1857 aa18.55■□□□□ 0.56
DDR1-271ENST00000513240 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
DDR1-271ENST00000513240 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
DDR1-271ENST00000513240 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
DDR1-271ENST00000513240 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
DDR1-271ENST00000513240 PMFBP1Q8TBY8 1022 aa18.54■□□□□ 0.56
DDR1-271ENST00000513240 AEBP1Q8IUX7 1158 aa18.54■□□□□ 0.56
DDR1-271ENST00000513240 PIK3C2BO00750 1634 aa18.54■□□□□ 0.56
DDR1-271ENST00000513240 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
DDR1-271ENST00000513240 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
DDR1-271ENST00000513240 APBB1O00213 710 aa18.53■□□□□ 0.56
DDR1-271ENST00000513240 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
DDR1-271ENST00000513240 MYO5BQ9ULV0 1848 aa18.53■□□□□ 0.56
DDR1-271ENST00000513240 METP08581 1390 aa18.52■□□□□ 0.56
DDR1-271ENST00000513240 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
DDR1-271ENST00000513240 NUDT16Q96DE0 195 aaKnown RBP18.52■□□□□ 0.55
DDR1-271ENST00000513240 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.55
DDR1-271ENST00000513240 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
DDR1-271ENST00000513240 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
DDR1-271ENST00000513240 NUTM2GQ5VZR2 741 aa18.51■□□□□ 0.55
DDR1-271ENST00000513240 PANK2Q9BZ23 570 aa18.51■□□□□ 0.55
DDR1-271ENST00000513240 NGEFQ8N5V2 710 aa18.5■□□□□ 0.55
DDR1-271ENST00000513240 PTPRMP28827 1452 aa18.5■□□□□ 0.55
DDR1-271ENST00000513240 CLCN1P35523 988 aa18.5■□□□□ 0.55
DDR1-271ENST00000513240 L1TD1Q5T7N2 865 aaKnown RBP18.5■□□□□ 0.55
DDR1-271ENST00000513240 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
DDR1-271ENST00000513240 C8orf58Q8NAV2 365 aa18.48■□□□□ 0.55
DDR1-271ENST00000513240 WASLO00401 505 aaPredicted RBP18.48■□□□□ 0.55
DDR1-271ENST00000513240 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
DDR1-271ENST00000513240 NEO1Q92859 1461 aa18.48■□□□□ 0.55
DDR1-271ENST00000513240 MCM10Q7L590 875 aa18.47■□□□□ 0.55
DDR1-271ENST00000513240 ARHGEF28Q8N1W1 1705 aaKnown RBP18.47■□□□□ 0.55
DDR1-271ENST00000513240 MYO3AQ8NEV4 1616 aa18.47■□□□□ 0.55
DDR1-271ENST00000513240 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
DDR1-271ENST00000513240 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.55
DDR1-271ENST00000513240 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
DDR1-271ENST00000513240 AAMPQ13685 434 aa18.45■□□□□ 0.54
DDR1-271ENST00000513240 SULT6B1Q6IMI4 303 aa18.45■□□□□ 0.54
DDR1-271ENST00000513240 COG3Q96JB2 828 aa18.45■□□□□ 0.54
DDR1-271ENST00000513240 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
DDR1-271ENST00000513240 FCHSD2O94868 740 aa18.44■□□□□ 0.54
DDR1-271ENST00000513240 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
DDR1-271ENST00000513240 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
DDR1-271ENST00000513240 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
DDR1-271ENST00000513240 HSP90AB2PQ58FF8 381 aa18.43■□□□□ 0.54
DDR1-271ENST00000513240 UPF2Q9HAU5 1272 aaKnown RBP18.43■□□□□ 0.54
DDR1-271ENST00000513240 DDX19BQ9UMR2 479 aa18.43■□□□□ 0.54
DDR1-271ENST00000513240 FOXO3O43524 673 aa18.43■□□□□ 0.54
DDR1-271ENST00000513240 VAMP4O75379 141 aa18.43■□□□□ 0.54
DDR1-271ENST00000513240 IL13P35225 146 aa18.43■□□□□ 0.54
DDR1-271ENST00000513240 ZC3H13Q5T200 1668 aaKnown RBP18.42■□□□□ 0.54
DDR1-271ENST00000513240 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 PPIP5K1Q6PFW1 1433 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 NSD2O96028 1365 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
DDR1-271ENST00000513240 ALKQ9UM73 1620 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms