RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 ZNF511Q8NB15 262 aa10.22□□□□□ -0.77
LINC01088-210ENST00000513153 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
LINC01088-210ENST00000513153 FAM217BQ9NTX9 383 aaPredicted RBP10.22□□□□□ -0.77
LINC01088-210ENST00000513153 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
LINC01088-210ENST00000513153 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
LINC01088-210ENST00000513153 MAN1A2O60476 641 aa10.2□□□□□ -0.78
LINC01088-210ENST00000513153 CLCN1P35523 988 aa10.2□□□□□ -0.78
LINC01088-210ENST00000513153 GSK3AP49840 483 aa10.19□□□□□ -0.78
LINC01088-210ENST00000513153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC01088-210ENST00000513153 TMEM151AQ8N4L1 468 aa10.18□□□□□ -0.78
LINC01088-210ENST00000513153 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
LINC01088-210ENST00000513153 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
LINC01088-210ENST00000513153 C6orf118Q5T5N4 469 aa10.17□□□□□ -0.78
LINC01088-210ENST00000513153 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
LINC01088-210ENST00000513153 FAM174AQ8TBP5 190 aa10.16□□□□□ -0.78
LINC01088-210ENST00000513153 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
LINC01088-210ENST00000513153 PRR7Q8TB68 274 aa10.15□□□□□ -0.78
LINC01088-210ENST00000513153 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
LINC01088-210ENST00000513153 GDF11O95390 407 aa10.14□□□□□ -0.79
LINC01088-210ENST00000513153 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
LINC01088-210ENST00000513153 NDUFV2P19404 249 aa10.13□□□□□ -0.79
LINC01088-210ENST00000513153 RASSF7Q02833 373 aa10.13□□□□□ -0.79
LINC01088-210ENST00000513153 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
LINC01088-210ENST00000513153 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
LINC01088-210ENST00000513153 CDK15Q96Q40 435 aa10.12□□□□□ -0.79
LINC01088-210ENST00000513153 BMP2P12643 396 aa10.11□□□□□ -0.79
LINC01088-210ENST00000513153 CTHP32929 405 aa10.11□□□□□ -0.79
LINC01088-210ENST00000513153 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
LINC01088-210ENST00000513153 UPP2O95045 317 aa10.1□□□□□ -0.79
LINC01088-210ENST00000513153 MTMR2Q13614 643 aa10.1□□□□□ -0.79
LINC01088-210ENST00000513153 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 RNF225M0QZC1 329 aaPredicted RBP10.09□□□□□ -0.79
LINC01088-210ENST00000513153 NR3C2P08235 984 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 FOXJ1Q92949 421 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 CNTNAP3BQ96NU0 1288 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 CNTNAP3Q9BZ76 1288 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
LINC01088-210ENST00000513153 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
LINC01088-210ENST00000513153 SSTR3P32745 418 aaPredicted RBP10.08□□□□□ -0.8
LINC01088-210ENST00000513153 NR5A1Q13285 461 aa10.08□□□□□ -0.8
LINC01088-210ENST00000513153 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
LINC01088-210ENST00000513153 ZMYND10O75800 440 aa10.07□□□□□ -0.8
LINC01088-210ENST00000513153 KRT76Q01546 638 aa10.07□□□□□ -0.8
LINC01088-210ENST00000513153 BARGINQ6ZT62 677 aa10.06□□□□□ -0.8
LINC01088-210ENST00000513153 GPR161Q8N6U8 529 aaKnown RBP10.06□□□□□ -0.8
LINC01088-210ENST00000513153 DNMT3LQ9UJW3 386 aa10.06□□□□□ -0.8
LINC01088-210ENST00000513153 SOS2Q07890 1332 aaPredicted RBP10.06□□□□□ -0.8
LINC01088-210ENST00000513153 AGERQ15109 404 aa10.05□□□□□ -0.8
LINC01088-210ENST00000513153 LYPD8Q6UX82 237 aa10.05□□□□□ -0.8
LINC01088-210ENST00000513153 MEIOBQ8N635 442 aa10.05□□□□□ -0.8
LINC01088-210ENST00000513153 SPTLC1O15269 473 aa10.04□□□□□ -0.8
LINC01088-210ENST00000513153 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
LINC01088-210ENST00000513153 GRM5P41594 1212 aa10.03□□□□□ -0.8
LINC01088-210ENST00000513153 AMHR2Q16671 573 aa10.02□□□□□ -0.81
LINC01088-210ENST00000513153 MAP10Q9P2G4 905 aa10.02□□□□□ -0.81
LINC01088-210ENST00000513153 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
LINC01088-210ENST00000513153 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-210ENST00000513153 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
LINC01088-210ENST00000513153 GPAT2Q6NUI2 795 aa10□□□□□ -0.81
LINC01088-210ENST00000513153 BPHLQ86WA6 291 aaPredicted RBP10□□□□□ -0.81
LINC01088-210ENST00000513153 PTSQ03393 145 aa9.99□□□□□ -0.81
LINC01088-210ENST00000513153 ZNF385CQ66K41 422 aaPredicted RBP9.99□□□□□ -0.81
LINC01088-210ENST00000513153 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
LINC01088-210ENST00000513153 TSEN34Q9BSV6 310 aaKnown RBP9.99□□□□□ -0.81
LINC01088-210ENST00000513153 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
LINC01088-210ENST00000513153 IRS1P35568 1242 aa9.98□□□□□ -0.81
LINC01088-210ENST00000513153 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
LINC01088-210ENST00000513153 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-210ENST00000513153 FIGNL2A6NMB9 653 aa9.96□□□□□ -0.82
LINC01088-210ENST00000513153 TTLL8A6PVC2 850 aa9.96□□□□□ -0.82
LINC01088-210ENST00000513153 FSHRP23945 695 aa9.96□□□□□ -0.82
LINC01088-210ENST00000513153 TTLL12Q14166 644 aaPredicted RBP9.96□□□□□ -0.82
LINC01088-210ENST00000513153 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.82
LINC01088-210ENST00000513153 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
LINC01088-210ENST00000513153 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
LINC01088-210ENST00000513153 PCDHB15Q9Y5E8 787 aa9.95□□□□□ -0.82
LINC01088-210ENST00000513153 IGHA1P01876 353 aa9.94□□□□□ -0.82
LINC01088-210ENST00000513153 GJA5P36382 358 aa9.94□□□□□ -0.82
LINC01088-210ENST00000513153 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
LINC01088-210ENST00000513153 CCDC155Q8N6L0 562 aa9.94□□□□□ -0.82
LINC01088-210ENST00000513153 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
LINC01088-210ENST00000513153 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
LINC01088-210ENST00000513153 WHAMMQ8TF30 809 aa9.93□□□□□ -0.82
LINC01088-210ENST00000513153 TBC1D2Q9BYX2 928 aa9.93□□□□□ -0.82
LINC01088-210ENST00000513153 EMILIN1Q9Y6C2 1016 aa9.93□□□□□ -0.82
LINC01088-210ENST00000513153 HRCP23327 699 aa9.92□□□□□ -0.82
LINC01088-210ENST00000513153 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
LINC01088-210ENST00000513153 PARP9Q8IXQ6 854 aa9.92□□□□□ -0.82
LINC01088-210ENST00000513153 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
LINC01088-210ENST00000513153 ARHGEF15O94989 841 aa9.91□□□□□ -0.82
LINC01088-210ENST00000513153 CCDC116Q8IYX3 515 aa9.91□□□□□ -0.82
LINC01088-210ENST00000513153 C1QTNF2Q9BXJ5 285 aa9.91□□□□□ -0.82
LINC01088-210ENST00000513153 MAP4K5Q9Y4K4 846 aa9.91□□□□□ -0.82
LINC01088-210ENST00000513153 TRIM66O15016 1216 aa9.9□□□□□ -0.82
LINC01088-210ENST00000513153 PER1O15534 1290 aaPredicted RBP9.9□□□□□ -0.82
LINC01088-210ENST00000513153 SLURP2P0DP57 97 aa9.9□□□□□ -0.82
LINC01088-210ENST00000513153 FOXK2Q01167 660 aa9.9□□□□□ -0.82
LINC01088-210ENST00000513153 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
LINC01088-210ENST00000513153 KANK3Q6NY19 840 aa9.9□□□□□ -0.82
LINC01088-210ENST00000513153 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms