RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
SDHC-208ENST00000513009 FNBP4Q8N3X1 1017 aaPredicted RBP12.5□□□□□ -0.41
SDHC-208ENST00000513009 USP21Q9UK80 565 aa12.5□□□□□ -0.41
SDHC-208ENST00000513009 TRPC5Q9UL62 973 aaPredicted RBP12.5□□□□□ -0.41
SDHC-208ENST00000513009 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
SDHC-208ENST00000513009 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
SDHC-208ENST00000513009 ATRNO75882 1429 aa12.49□□□□□ -0.41
SDHC-208ENST00000513009 ITGAEP38570 1179 aa12.49□□□□□ -0.41
SDHC-208ENST00000513009 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
SDHC-208ENST00000513009 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
SDHC-208ENST00000513009 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
SDHC-208ENST00000513009 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
SDHC-208ENST00000513009 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
SDHC-208ENST00000513009 MYOM2P54296 1465 aa12.47□□□□□ -0.41
SDHC-208ENST00000513009 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
SDHC-208ENST00000513009 PPLO60437 1756 aa12.47□□□□□ -0.41
SDHC-208ENST00000513009 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
SDHC-208ENST00000513009 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.41
SDHC-208ENST00000513009 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
SDHC-208ENST00000513009 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
SDHC-208ENST00000513009 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
SDHC-208ENST00000513009 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
SDHC-208ENST00000513009 BCL9LQ86UU0 1499 aa12.45□□□□□ -0.42
SDHC-208ENST00000513009 PXDNQ92626 1479 aa12.45□□□□□ -0.42
SDHC-208ENST00000513009 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
SDHC-208ENST00000513009 NAIPQ13075 1403 aa12.44□□□□□ -0.42
SDHC-208ENST00000513009 COLQQ9Y215 455 aaPredicted RBP12.43□□□□□ -0.42
SDHC-208ENST00000513009 IER5LQ5T953 404 aa12.42□□□□□ -0.42
SDHC-208ENST00000513009 TECPR2O15040 1411 aa12.41□□□□□ -0.42
SDHC-208ENST00000513009 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
SDHC-208ENST00000513009 LRPPRCP42704 1394 aaKnown RBP12.41□□□□□ -0.42
SDHC-208ENST00000513009 RRBP1Q9P2E9 1410 aaKnown RBP12.4□□□□□ -0.42
SDHC-208ENST00000513009 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
SDHC-208ENST00000513009 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.43
SDHC-208ENST00000513009 SLIT2O94813 1529 aa12.39□□□□□ -0.43
SDHC-208ENST00000513009 GLI3P10071 1580 aa12.39□□□□□ -0.43
SDHC-208ENST00000513009 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
SDHC-208ENST00000513009 FMN2Q9NZ56 1722 aa12.38□□□□□ -0.43
SDHC-208ENST00000513009 FOXO3O43524 673 aa12.38□□□□□ -0.43
SDHC-208ENST00000513009 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
SDHC-208ENST00000513009 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
SDHC-208ENST00000513009 PSEN1P49768 467 aa12.37□□□□□ -0.43
SDHC-208ENST00000513009 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
SDHC-208ENST00000513009 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
SDHC-208ENST00000513009 RALGAPBQ86X10 1494 aa12.36□□□□□ -0.43
SDHC-208ENST00000513009 ABCC11Q96J66 1382 aa12.36□□□□□ -0.43
SDHC-208ENST00000513009 XPCQ01831 940 aaPredicted RBP12.36□□□□□ -0.43
SDHC-208ENST00000513009 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
SDHC-208ENST00000513009 SPATA31A3Q5VYP0 1347 aa12.36□□□□□ -0.43
SDHC-208ENST00000513009 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
SDHC-208ENST00000513009 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
SDHC-208ENST00000513009 NWD2Q9ULI1 1742 aa12.34□□□□□ -0.43
SDHC-208ENST00000513009 ANKRD30BQ9BXX2 1392 aa12.34□□□□□ -0.43
SDHC-208ENST00000513009 SEC24BO95487 1268 aa12.34□□□□□ -0.43
SDHC-208ENST00000513009 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
SDHC-208ENST00000513009 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
SDHC-208ENST00000513009 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
SDHC-208ENST00000513009 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
SDHC-208ENST00000513009 EP400Q96L91 3159 aa12.33□□□□□ -0.44
SDHC-208ENST00000513009 LRP5O75197 1615 aa12.33□□□□□ -0.44
SDHC-208ENST00000513009 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
SDHC-208ENST00000513009 RGPD8O14715 1765 aaPredicted RBP12.32□□□□□ -0.44
SDHC-208ENST00000513009 PLEKHH1Q9ULM0 1364 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 ABCA3Q99758 1704 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 TNS3Q68CZ2 1445 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 NUTM2FA1L443 756 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 STK26Q9P289 416 aa12.31□□□□□ -0.44
SDHC-208ENST00000513009 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
SDHC-208ENST00000513009 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
SDHC-208ENST00000513009 VPS72Q15906 364 aa12.3□□□□□ -0.44
SDHC-208ENST00000513009 KRT28Q7Z3Y7 464 aa12.3□□□□□ -0.44
SDHC-208ENST00000513009 ACIN1Q9UKV3 1341 aaKnown RBP12.3□□□□□ -0.44
SDHC-208ENST00000513009 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
SDHC-208ENST00000513009 SF3B2Q13435 895 aaKnown RBP12.29□□□□□ -0.44
SDHC-208ENST00000513009 TMEM132EQ6IEE7 984 aa12.29□□□□□ -0.44
SDHC-208ENST00000513009 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
SDHC-208ENST00000513009 SEPT12Q8IYM1 358 aa12.29□□□□□ -0.44
SDHC-208ENST00000513009 RNF25Q96BH1 459 aaPredicted RBP12.29□□□□□ -0.44
SDHC-208ENST00000513009 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
SDHC-208ENST00000513009 NRXN1Q9ULB1 1477 aa12.28□□□□□ -0.44
SDHC-208ENST00000513009 PSME1Q06323 249 aa12.28□□□□□ -0.44
SDHC-208ENST00000513009 RGL3Q3MIN7 710 aa12.28□□□□□ -0.44
SDHC-208ENST00000513009 PHF8Q9UPP1 1060 aa12.28□□□□□ -0.44
SDHC-208ENST00000513009 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.45
SDHC-208ENST00000513009 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
SDHC-208ENST00000513009 NRAPQ86VF7 1730 aa12.27□□□□□ -0.45
SDHC-208ENST00000513009 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
SDHC-208ENST00000513009 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
SDHC-208ENST00000513009 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
SDHC-208ENST00000513009 PLCG2P16885 1265 aa12.25□□□□□ -0.45
SDHC-208ENST00000513009 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
SDHC-208ENST00000513009 C14orf93Q9H972 538 aaKnown RBP12.25□□□□□ -0.45
SDHC-208ENST00000513009 ADGRB2O60241 1585 aa12.24□□□□□ -0.45
SDHC-208ENST00000513009 ANKARQ7Z5J8 1434 aa12.24□□□□□ -0.45
SDHC-208ENST00000513009 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
SDHC-208ENST00000513009 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
SDHC-208ENST00000513009 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
SDHC-208ENST00000513009 DHX57Q6P158 1386 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms