RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
SSBP2-216ENST00000512923 PROM2Q8N271 834 aa13.94□□□□□ -0.18
SSBP2-216ENST00000512923 ATF3P18847 181 aa13.93□□□□□ -0.18
SSBP2-216ENST00000512923 IQSEC2Q5JU85 1478 aa13.92□□□□□ -0.18
SSBP2-216ENST00000512923 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
SSBP2-216ENST00000512923 NUDT16Q96DE0 195 aaKnown RBP13.91□□□□□ -0.18
SSBP2-216ENST00000512923 MST1RQ04912 1400 aa13.91□□□□□ -0.18
SSBP2-216ENST00000512923 PPIP5K1Q6PFW1 1433 aa13.91□□□□□ -0.18
SSBP2-216ENST00000512923 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
SSBP2-216ENST00000512923 PRR36Q9H6K5 1346 aa13.91□□□□□ -0.18
SSBP2-216ENST00000512923 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
SSBP2-216ENST00000512923 NUTM2FA1L443 756 aa13.9□□□□□ -0.19
SSBP2-216ENST00000512923 AKAP12Q02952 1782 aa13.89□□□□□ -0.19
SSBP2-216ENST00000512923 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
SSBP2-216ENST00000512923 GABBR2O75899 941 aa13.89□□□□□ -0.19
SSBP2-216ENST00000512923 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
SSBP2-216ENST00000512923 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
SSBP2-216ENST00000512923 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
SSBP2-216ENST00000512923 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
SSBP2-216ENST00000512923 CD163L1Q9NR16 1453 aa13.86□□□□□ -0.19
SSBP2-216ENST00000512923 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
SSBP2-216ENST00000512923 TERF2IPQ9NYB0 399 aa13.86□□□□□ -0.19
SSBP2-216ENST00000512923 CABP1Q9NZU7 370 aa13.86□□□□□ -0.19
SSBP2-216ENST00000512923 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
SSBP2-216ENST00000512923 PLEKHG3A1L390 1219 aa13.85□□□□□ -0.19
SSBP2-216ENST00000512923 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
SSBP2-216ENST00000512923 HDGFL2Q7Z4V5 671 aaPredicted RBP13.85□□□□□ -0.19
SSBP2-216ENST00000512923 CPSF1Q10570 1443 aaKnown RBP13.84□□□□□ -0.19
SSBP2-216ENST00000512923 NRKQ7Z2Y5 1582 aa13.84□□□□□ -0.19
SSBP2-216ENST00000512923 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
SSBP2-216ENST00000512923 CERKQ8TCT0 537 aa13.84□□□□□ -0.19
SSBP2-216ENST00000512923 PANK3Q9H999 370 aa13.84□□□□□ -0.19
SSBP2-216ENST00000512923 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
SSBP2-216ENST00000512923 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
SSBP2-216ENST00000512923 ACEP12821 1306 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 KTN1Q86UP2 1357 aaKnown RBP13.82□□□□□ -0.2
SSBP2-216ENST00000512923 TOM1O60784 492 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
SSBP2-216ENST00000512923 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
SSBP2-216ENST00000512923 USP6P35125 1406 aa13.81□□□□□ -0.2
SSBP2-216ENST00000512923 EDC4Q6P2E9 1401 aaKnown RBP13.81□□□□□ -0.2
SSBP2-216ENST00000512923 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
SSBP2-216ENST00000512923 BRINP3Q76B58 766 aa13.8□□□□□ -0.2
SSBP2-216ENST00000512923 BRD4O60885 1362 aaPredicted RBP13.79□□□□□ -0.2
SSBP2-216ENST00000512923 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
SSBP2-216ENST00000512923 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
SSBP2-216ENST00000512923 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
SSBP2-216ENST00000512923 ANKRD26Q9UPS8 1709 aa13.78□□□□□ -0.2
SSBP2-216ENST00000512923 KNSTRNQ9Y448 316 aa13.78□□□□□ -0.2
SSBP2-216ENST00000512923 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.2
SSBP2-216ENST00000512923 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
SSBP2-216ENST00000512923 PER1O15534 1290 aaPredicted RBP13.77□□□□□ -0.21
SSBP2-216ENST00000512923 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
SSBP2-216ENST00000512923 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
SSBP2-216ENST00000512923 FOXO3O43524 673 aa13.76□□□□□ -0.21
SSBP2-216ENST00000512923 PSME1Q06323 249 aa13.76□□□□□ -0.21
SSBP2-216ENST00000512923 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
SSBP2-216ENST00000512923 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
SSBP2-216ENST00000512923 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
SSBP2-216ENST00000512923 PXDNQ92626 1479 aa13.76□□□□□ -0.21
SSBP2-216ENST00000512923 FKBP8Q14318 412 aa13.75□□□□□ -0.21
SSBP2-216ENST00000512923 TTC21AQ8NDW8 1320 aa13.75□□□□□ -0.21
SSBP2-216ENST00000512923 NSD2O96028 1365 aa13.75□□□□□ -0.21
SSBP2-216ENST00000512923 NPC1L1Q9UHC9 1359 aa13.75□□□□□ -0.21
SSBP2-216ENST00000512923 PIK3C2AO00443 1686 aa13.75□□□□□ -0.21
SSBP2-216ENST00000512923 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
SSBP2-216ENST00000512923 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
SSBP2-216ENST00000512923 TTC21BQ7Z4L5 1316 aa13.74□□□□□ -0.21
SSBP2-216ENST00000512923 ALS2Q96Q42 1657 aa13.74□□□□□ -0.21
SSBP2-216ENST00000512923 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
SSBP2-216ENST00000512923 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
SSBP2-216ENST00000512923 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
SSBP2-216ENST00000512923 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
SSBP2-216ENST00000512923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.72□□□□□ -0.21
SSBP2-216ENST00000512923 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
SSBP2-216ENST00000512923 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
SSBP2-216ENST00000512923 SOS2Q07890 1332 aaPredicted RBP13.71□□□□□ -0.21
SSBP2-216ENST00000512923 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
SSBP2-216ENST00000512923 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
SSBP2-216ENST00000512923 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.22
SSBP2-216ENST00000512923 COL16A1Q07092 1604 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-216ENST00000512923 ANP32CO43423 234 aa13.7□□□□□ -0.22
SSBP2-216ENST00000512923 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
SSBP2-216ENST00000512923 FYB1O15117 783 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
SSBP2-216ENST00000512923 NME9Q86XW9 330 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 ARHGEF10O15013 1369 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 USP31Q70CQ4 1352 aa13.69□□□□□ -0.22
SSBP2-216ENST00000512923 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
SSBP2-216ENST00000512923 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
SSBP2-216ENST00000512923 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
SSBP2-216ENST00000512923 PARD3Q8TEW0 1356 aa13.68□□□□□ -0.22
SSBP2-216ENST00000512923 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
SSBP2-216ENST00000512923 CNGB1Q14028 1251 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms