RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 PTMAP06454 111 aaKnown RBP13.3□□□□□ -0.28
PDCD6-209ENST00000512466 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
PDCD6-209ENST00000512466 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
PDCD6-209ENST00000512466 NSD3Q9BZ95 1437 aa13.29□□□□□ -0.28
PDCD6-209ENST00000512466 TNRQ92752 1358 aa13.29□□□□□ -0.28
PDCD6-209ENST00000512466 MPNDQ8N594 471 aa13.29□□□□□ -0.28
PDCD6-209ENST00000512466 EIF2AK4Q9P2K8 1649 aaKnown RBP13.29□□□□□ -0.28
PDCD6-209ENST00000512466 UHRF1BP1Q6BDS2 1440 aa13.29□□□□□ -0.28
PDCD6-209ENST00000512466 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
PDCD6-209ENST00000512466 DNTTIP2Q5QJE6 756 aaKnown RBP13.28□□□□□ -0.28
PDCD6-209ENST00000512466 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
PDCD6-209ENST00000512466 ABCC3O15438 1527 aa13.28□□□□□ -0.28
PDCD6-209ENST00000512466 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDCD6-209ENST00000512466 TRIM27P14373 513 aa13.28□□□□□ -0.28
PDCD6-209ENST00000512466 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
PDCD6-209ENST00000512466 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
PDCD6-209ENST00000512466 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
PDCD6-209ENST00000512466 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
PDCD6-209ENST00000512466 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
PDCD6-209ENST00000512466 MSNP26038 577 aaKnown RBP13.26□□□□□ -0.29
PDCD6-209ENST00000512466 PRDM15P57071 1507 aaPredicted RBP13.26□□□□□ -0.29
PDCD6-209ENST00000512466 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 HDGFL2Q7Z4V5 671 aaPredicted RBP13.26□□□□□ -0.29
PDCD6-209ENST00000512466 EVC2Q86UK5 1308 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 PTPRTO14522 1441 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 TET3O43151 1660 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 FRMPD1Q5SYB0 1578 aa13.26□□□□□ -0.29
PDCD6-209ENST00000512466 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
PDCD6-209ENST00000512466 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
PDCD6-209ENST00000512466 NOS1P29475 1434 aa13.25□□□□□ -0.29
PDCD6-209ENST00000512466 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
PDCD6-209ENST00000512466 ARHGEF40Q8TER5 1519 aa13.24□□□□□ -0.29
PDCD6-209ENST00000512466 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
PDCD6-209ENST00000512466 AGLP35573 1532 aa13.24□□□□□ -0.29
PDCD6-209ENST00000512466 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
PDCD6-209ENST00000512466 TERF2IPQ9NYB0 399 aa13.24□□□□□ -0.29
PDCD6-209ENST00000512466 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
PDCD6-209ENST00000512466 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
PDCD6-209ENST00000512466 DCTN1Q14203 1278 aa13.23□□□□□ -0.29
PDCD6-209ENST00000512466 ARHGAP31Q2M1Z3 1444 aa13.23□□□□□ -0.29
PDCD6-209ENST00000512466 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
PDCD6-209ENST00000512466 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
PDCD6-209ENST00000512466 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
PDCD6-209ENST00000512466 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
PDCD6-209ENST00000512466 UGGT1Q9NYU2 1555 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 MRE11P49959 708 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 TRPM2O94759 1503 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 CAVIN1Q6NZI2 390 aaKnown RBP13.21□□□□□ -0.29
PDCD6-209ENST00000512466 CASC1Q6TDU7 716 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 CABP1Q9NZU7 370 aa13.21□□□□□ -0.29
PDCD6-209ENST00000512466 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.29
PDCD6-209ENST00000512466 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 CEP152O94986 1710 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
PDCD6-209ENST00000512466 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
PDCD6-209ENST00000512466 E9PCH4 1651 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 ANKLE2Q86XL3 938 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 NGEFQ8N5V2 710 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 C14orf93Q9H972 538 aaKnown RBP13.19□□□□□ -0.3
PDCD6-209ENST00000512466 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 SSFA2P28290 1259 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 USP19O94966 1318 aa13.19□□□□□ -0.3
PDCD6-209ENST00000512466 RNF17Q9BXT8 1623 aaKnown RBP13.19□□□□□ -0.3
PDCD6-209ENST00000512466 RILPL2Q969X0 211 aa13.18□□□□□ -0.3
PDCD6-209ENST00000512466 ERVK-7P63135 1459 aa13.18□□□□□ -0.3
PDCD6-209ENST00000512466 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
PDCD6-209ENST00000512466 ESPNB1AK53 854 aa13.18□□□□□ -0.3
PDCD6-209ENST00000512466 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
PDCD6-209ENST00000512466 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
PDCD6-209ENST00000512466 NASPP49321 788 aaPredicted RBP13.17□□□□□ -0.3
PDCD6-209ENST00000512466 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
PDCD6-209ENST00000512466 VWDEQ8N2E2 1590 aa13.17□□□□□ -0.3
PDCD6-209ENST00000512466 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
PDCD6-209ENST00000512466 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
PDCD6-209ENST00000512466 RIMS2Q9UQ26 1411 aa13.16□□□□□ -0.3
PDCD6-209ENST00000512466 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
PDCD6-209ENST00000512466 ASXL1Q8IXJ9 1541 aa13.16□□□□□ -0.3
PDCD6-209ENST00000512466 FAM83GA6ND36 823 aa13.16□□□□□ -0.3
PDCD6-209ENST00000512466 MROH1Q8NDA8 1641 aa13.15□□□□□ -0.3
PDCD6-209ENST00000512466 LTV1Q96GA3 475 aaPredicted RBP13.15□□□□□ -0.3
PDCD6-209ENST00000512466 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
PDCD6-209ENST00000512466 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.31
PDCD6-209ENST00000512466 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.31
PDCD6-209ENST00000512466 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.31
PDCD6-209ENST00000512466 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
PDCD6-209ENST00000512466 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
PDCD6-209ENST00000512466 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
PDCD6-209ENST00000512466 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
PDCD6-209ENST00000512466 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
PDCD6-209ENST00000512466 REREQ9P2R6 1566 aa13.14□□□□□ -0.31
PDCD6-209ENST00000512466 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
PDCD6-209ENST00000512466 TSHZ3Q63HK5 1081 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms