RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 DIEXFQ68CQ4 756 aaKnown RBP14□□□□□ -0.17
SUB1-210ENST00000511988 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
SUB1-210ENST00000511988 MST1RQ04912 1400 aa13.99□□□□□ -0.17
SUB1-210ENST00000511988 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
SUB1-210ENST00000511988 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
SUB1-210ENST00000511988 A0A1W2PP64 1363 aa13.98□□□□□ -0.17
SUB1-210ENST00000511988 ATF3P18847 181 aa13.98□□□□□ -0.17
SUB1-210ENST00000511988 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
SUB1-210ENST00000511988 KIF20BQ96Q89 1820 aa13.98□□□□□ -0.17
SUB1-210ENST00000511988 C1orf167Q5SNV9 1468 aa13.98□□□□□ -0.17
SUB1-210ENST00000511988 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
SUB1-210ENST00000511988 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
SUB1-210ENST00000511988 ANKRD26Q9UPS8 1709 aa13.96□□□□□ -0.17
SUB1-210ENST00000511988 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
SUB1-210ENST00000511988 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
SUB1-210ENST00000511988 HDGFL2Q7Z4V5 671 aaPredicted RBP13.96□□□□□ -0.17
SUB1-210ENST00000511988 DEFB132Q7Z7B7 95 aa13.96□□□□□ -0.17
SUB1-210ENST00000511988 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
SUB1-210ENST00000511988 PANK3Q9H999 370 aa13.96□□□□□ -0.17
SUB1-210ENST00000511988 EDC4Q6P2E9 1401 aaKnown RBP13.96□□□□□ -0.18
SUB1-210ENST00000511988 NSD3Q9BZ95 1437 aa13.96□□□□□ -0.18
SUB1-210ENST00000511988 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
SUB1-210ENST00000511988 CABP1Q9NZU7 370 aa13.95□□□□□ -0.18
SUB1-210ENST00000511988 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
SUB1-210ENST00000511988 USP6P35125 1406 aa13.94□□□□□ -0.18
SUB1-210ENST00000511988 BRD4O60885 1362 aaPredicted RBP13.94□□□□□ -0.18
SUB1-210ENST00000511988 NSD2O96028 1365 aa13.94□□□□□ -0.18
SUB1-210ENST00000511988 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
SUB1-210ENST00000511988 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
SUB1-210ENST00000511988 BRINP3Q76B58 766 aa13.93□□□□□ -0.18
SUB1-210ENST00000511988 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
SUB1-210ENST00000511988 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
SUB1-210ENST00000511988 SENP3-EIF4A1A0A087X0R7 540 aa13.92□□□□□ -0.18
SUB1-210ENST00000511988 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SUB1-210ENST00000511988 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
SUB1-210ENST00000511988 USP21Q9UK80 565 aa13.92□□□□□ -0.18
SUB1-210ENST00000511988 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
SUB1-210ENST00000511988 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
SUB1-210ENST00000511988 ACEP12821 1306 aa13.91□□□□□ -0.18
SUB1-210ENST00000511988 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
SUB1-210ENST00000511988 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
SUB1-210ENST00000511988 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
SUB1-210ENST00000511988 ANP32CO43423 234 aa13.9□□□□□ -0.18
SUB1-210ENST00000511988 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
SUB1-210ENST00000511988 CARD14Q9BXL6 1004 aa13.9□□□□□ -0.18
SUB1-210ENST00000511988 TRPM3Q9HCF6 1732 aaPredicted RBP13.9□□□□□ -0.18
SUB1-210ENST00000511988 SSH2Q76I76 1423 aa13.9□□□□□ -0.19
SUB1-210ENST00000511988 ESCO1Q5FWF5 840 aa13.89□□□□□ -0.19
SUB1-210ENST00000511988 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
SUB1-210ENST00000511988 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
SUB1-210ENST00000511988 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
SUB1-210ENST00000511988 PARD3Q8TEW0 1356 aa13.88□□□□□ -0.19
SUB1-210ENST00000511988 PMFBP1Q8TBY8 1022 aa13.88□□□□□ -0.19
SUB1-210ENST00000511988 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
SUB1-210ENST00000511988 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
SUB1-210ENST00000511988 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
SUB1-210ENST00000511988 ATRNO75882 1429 aa13.86□□□□□ -0.19
SUB1-210ENST00000511988 NPHP3Q7Z494 1330 aa13.86□□□□□ -0.19
SUB1-210ENST00000511988 BCL9LQ86UU0 1499 aa13.86□□□□□ -0.19
SUB1-210ENST00000511988 PXDNQ92626 1479 aa13.86□□□□□ -0.19
SUB1-210ENST00000511988 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
SUB1-210ENST00000511988 SF3B2Q13435 895 aaKnown RBP13.85□□□□□ -0.19
SUB1-210ENST00000511988 RALBP1Q15311 655 aa13.85□□□□□ -0.19
SUB1-210ENST00000511988 PRKRIP1Q9H875 184 aaPredicted RBP13.85□□□□□ -0.19
SUB1-210ENST00000511988 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
SUB1-210ENST00000511988 OVOS2A0A0J9YW53 1432 aa13.84□□□□□ -0.19
SUB1-210ENST00000511988 OVOS2Q6IE36 1432 aa13.84□□□□□ -0.19
SUB1-210ENST00000511988 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
SUB1-210ENST00000511988 DDX17Q92841 729 aaKnown RBP13.83□□□□□ -0.2
SUB1-210ENST00000511988 SBNO1A3KN83 1393 aa13.83□□□□□ -0.2
SUB1-210ENST00000511988 PSME1Q06323 249 aa13.82□□□□□ -0.2
SUB1-210ENST00000511988 CC2D1BQ5T0F9 858 aaKnown RBP13.82□□□□□ -0.2
SUB1-210ENST00000511988 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
SUB1-210ENST00000511988 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
SUB1-210ENST00000511988 FYB1O15117 783 aa13.81□□□□□ -0.2
SUB1-210ENST00000511988 FOXO3O43524 673 aa13.81□□□□□ -0.2
SUB1-210ENST00000511988 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.81□□□□□ -0.2
SUB1-210ENST00000511988 MYBBP1AQ9BQG0 1328 aaKnown RBP13.81□□□□□ -0.2
SUB1-210ENST00000511988 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
SUB1-210ENST00000511988 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 NME9Q86XW9 330 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 MIER1Q8N108 512 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 SLIT3O75094 1523 aa13.79□□□□□ -0.2
SUB1-210ENST00000511988 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
SUB1-210ENST00000511988 CRYBG1Q9Y4K1 1723 aa13.78□□□□□ -0.2
SUB1-210ENST00000511988 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
SUB1-210ENST00000511988 R3HDM1Q15032 1099 aaKnown RBP13.78□□□□□ -0.2
SUB1-210ENST00000511988 COG3Q96JB2 828 aa13.78□□□□□ -0.2
SUB1-210ENST00000511988 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
SUB1-210ENST00000511988 SOS2Q07890 1332 aaPredicted RBP13.78□□□□□ -0.2
SUB1-210ENST00000511988 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
SUB1-210ENST00000511988 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
SUB1-210ENST00000511988 AATKQ6ZMQ8 1374 aa13.77□□□□□ -0.21
SUB1-210ENST00000511988 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.21
SUB1-210ENST00000511988 NLRP13Q86W25 1043 aa13.77□□□□□ -0.21
SUB1-210ENST00000511988 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
SUB1-210ENST00000511988 GJD4Q96KN9 370 aaPredicted RBP13.76□□□□□ -0.21
SUB1-210ENST00000511988 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms