RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 FOXO3O43524 673 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 UNC5CLQ8IV45 518 aa12.49□□□□□ -0.41
NR1I3-228ENST00000511676 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
NR1I3-228ENST00000511676 STK26Q9P289 416 aa12.47□□□□□ -0.41
NR1I3-228ENST00000511676 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
NR1I3-228ENST00000511676 KRT28Q7Z3Y7 464 aa12.46□□□□□ -0.41
NR1I3-228ENST00000511676 POGKQ9P215 609 aa12.46□□□□□ -0.41
NR1I3-228ENST00000511676 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
NR1I3-228ENST00000511676 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
NR1I3-228ENST00000511676 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-228ENST00000511676 RGS12O14924 1447 aa12.45□□□□□ -0.42
NR1I3-228ENST00000511676 ATRNO75882 1429 aa12.45□□□□□ -0.42
NR1I3-228ENST00000511676 CDC42BPGQ6DT37 1551 aa12.44□□□□□ -0.42
NR1I3-228ENST00000511676 SPATA31A3Q5VYP0 1347 aa12.44□□□□□ -0.42
NR1I3-228ENST00000511676 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
NR1I3-228ENST00000511676 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
NR1I3-228ENST00000511676 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-228ENST00000511676 RALBP1Q15311 655 aa12.43□□□□□ -0.42
NR1I3-228ENST00000511676 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
NR1I3-228ENST00000511676 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
NR1I3-228ENST00000511676 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
NR1I3-228ENST00000511676 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
NR1I3-228ENST00000511676 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
NR1I3-228ENST00000511676 COL22A1Q8NFW1 1626 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-228ENST00000511676 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-228ENST00000511676 VPS72Q15906 364 aa12.41□□□□□ -0.42
NR1I3-228ENST00000511676 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
NR1I3-228ENST00000511676 WAPLQ7Z5K2 1190 aa12.41□□□□□ -0.42
NR1I3-228ENST00000511676 ATP7BP35670 1465 aa12.4□□□□□ -0.42
NR1I3-228ENST00000511676 BAG6P46379 1132 aa12.4□□□□□ -0.42
NR1I3-228ENST00000511676 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
NR1I3-228ENST00000511676 NSD2O96028 1365 aa12.4□□□□□ -0.42
NR1I3-228ENST00000511676 KIF1AQ12756 1690 aa12.39□□□□□ -0.43
NR1I3-228ENST00000511676 ONECUT3O60422 494 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-228ENST00000511676 PANK3Q9H999 370 aa12.39□□□□□ -0.43
NR1I3-228ENST00000511676 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
NR1I3-228ENST00000511676 KRT27Q7Z3Y8 459 aa12.38□□□□□ -0.43
NR1I3-228ENST00000511676 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
NR1I3-228ENST00000511676 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
NR1I3-228ENST00000511676 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 A0A0G2JS52 829 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-228ENST00000511676 MYT1Q01538 1121 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-228ENST00000511676 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 PXDNQ92626 1479 aa12.37□□□□□ -0.43
NR1I3-228ENST00000511676 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-228ENST00000511676 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
NR1I3-228ENST00000511676 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
NR1I3-228ENST00000511676 SEPT12Q8IYM1 358 aa12.36□□□□□ -0.43
NR1I3-228ENST00000511676 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
NR1I3-228ENST00000511676 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NR1I3-228ENST00000511676 TNS3Q68CZ2 1445 aa12.36□□□□□ -0.43
NR1I3-228ENST00000511676 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
NR1I3-228ENST00000511676 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
NR1I3-228ENST00000511676 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
NR1I3-228ENST00000511676 INSRP06213 1382 aa12.34□□□□□ -0.43
NR1I3-228ENST00000511676 SLIT2O94813 1529 aa12.34□□□□□ -0.43
NR1I3-228ENST00000511676 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
NR1I3-228ENST00000511676 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NR1I3-228ENST00000511676 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR1I3-228ENST00000511676 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
NR1I3-228ENST00000511676 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
NR1I3-228ENST00000511676 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.33□□□□□ -0.44
NR1I3-228ENST00000511676 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NR1I3-228ENST00000511676 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
NR1I3-228ENST00000511676 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-228ENST00000511676 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
NR1I3-228ENST00000511676 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NR1I3-228ENST00000511676 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NR1I3-228ENST00000511676 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
NR1I3-228ENST00000511676 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NR1I3-228ENST00000511676 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
NR1I3-228ENST00000511676 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NR1I3-228ENST00000511676 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NR1I3-228ENST00000511676 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
NR1I3-228ENST00000511676 EVA1CP58658 441 aa12.3□□□□□ -0.44
NR1I3-228ENST00000511676 FAM196AQ6ZSG2 479 aa12.3□□□□□ -0.44
NR1I3-228ENST00000511676 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NR1I3-228ENST00000511676 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-228ENST00000511676 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
NR1I3-228ENST00000511676 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
NR1I3-228ENST00000511676 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
NR1I3-228ENST00000511676 PMFBP1Q8TBY8 1022 aa12.29□□□□□ -0.44
NR1I3-228ENST00000511676 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
NR1I3-228ENST00000511676 PRDM11Q9NQV5 511 aa12.29□□□□□ -0.44
NR1I3-228ENST00000511676 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NR1I3-228ENST00000511676 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
NR1I3-228ENST00000511676 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-228ENST00000511676 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
NR1I3-228ENST00000511676 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-228ENST00000511676 NWD2Q9ULI1 1742 aa12.28□□□□□ -0.44
NR1I3-228ENST00000511676 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-228ENST00000511676 PDE3BQ13370 1112 aa12.27□□□□□ -0.45
NR1I3-228ENST00000511676 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-228ENST00000511676 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.45
NR1I3-228ENST00000511676 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-228ENST00000511676 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
NR1I3-228ENST00000511676 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms