RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 NGLY1Q96IV0 654 aa10□□□□□ -0.81
PDLIM5-215ENST00000511586 SLC12A5Q9H2X9 1139 aa10□□□□□ -0.81
PDLIM5-215ENST00000511586 RGS17Q9UGC6 210 aaPredicted RBP10□□□□□ -0.81
PDLIM5-215ENST00000511586 HSPA5P11021 654 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 ZNF772Q68DY9 489 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 ABTB2Q8N961 1025 aa9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 C8orf37Q96NL8 207 aa9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 NINLQ9Y2I6 1382 aa9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 USP6P35125 1406 aa9.99□□□□□ -0.81
PDLIM5-215ENST00000511586 TERF2IPQ9NYB0 399 aa9.98□□□□□ -0.81
PDLIM5-215ENST00000511586 AFF2P51816 1311 aa9.98□□□□□ -0.81
PDLIM5-215ENST00000511586 TRPM3Q9HCF6 1732 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-215ENST00000511586 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-215ENST00000511586 CPSF1Q10570 1443 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-215ENST00000511586 NUTM2GQ5VZR2 741 aa9.97□□□□□ -0.81
PDLIM5-215ENST00000511586 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
PDLIM5-215ENST00000511586 ALS2Q96Q42 1657 aa9.96□□□□□ -0.81
PDLIM5-215ENST00000511586 NLRP6P59044 892 aa9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 FNBP4Q8N3X1 1017 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 TTC21AQ8NDW8 1320 aa9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
PDLIM5-215ENST00000511586 ILDR2Q71H61 639 aa9.95□□□□□ -0.82
PDLIM5-215ENST00000511586 USP21Q9UK80 565 aa9.95□□□□□ -0.82
PDLIM5-215ENST00000511586 CD163L1Q9NR16 1453 aa9.94□□□□□ -0.82
PDLIM5-215ENST00000511586 FAM83GA6ND36 823 aa9.94□□□□□ -0.82
PDLIM5-215ENST00000511586 GCP02774 474 aa9.94□□□□□ -0.82
PDLIM5-215ENST00000511586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.94□□□□□ -0.82
PDLIM5-215ENST00000511586 QTRT2Q9H974 415 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-215ENST00000511586 EDC4Q6P2E9 1401 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 A0A1W2PP64 1363 aa9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 ANKRD36BQ8N2N9 1353 aa9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 USP19O94966 1318 aa9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 ZC3H6P61129 1189 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
PDLIM5-215ENST00000511586 RXRBP28702 533 aa9.92□□□□□ -0.82
PDLIM5-215ENST00000511586 UNC5CLQ8IV45 518 aa9.92□□□□□ -0.82
PDLIM5-215ENST00000511586 PRDM11Q9NQV5 511 aa9.92□□□□□ -0.82
PDLIM5-215ENST00000511586 TRPC5Q9UL62 973 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-215ENST00000511586 AKAP12Q02952 1782 aa9.92□□□□□ -0.82
PDLIM5-215ENST00000511586 NME9Q86XW9 330 aa9.91□□□□□ -0.82
PDLIM5-215ENST00000511586 KCNH5Q8NCM2 988 aa9.91□□□□□ -0.82
PDLIM5-215ENST00000511586 SLIT2O94813 1529 aa9.91□□□□□ -0.82
PDLIM5-215ENST00000511586 BCL9LQ86UU0 1499 aa9.91□□□□□ -0.82
PDLIM5-215ENST00000511586 USP31Q70CQ4 1352 aa9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 KIAA0232Q92628 1395 aa9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 C11orf95C9JLR9 678 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 ZEB1P37275 1124 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 CHRNA2Q15822 529 aa9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 BTG4Q9NY30 223 aa9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 ZRANB1Q9UGI0 708 aa9.9□□□□□ -0.82
PDLIM5-215ENST00000511586 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.83
PDLIM5-215ENST00000511586 ABCA3Q99758 1704 aa9.9□□□□□ -0.83
PDLIM5-215ENST00000511586 MARF1Q9Y4F3 1742 aaKnown RBP9.9□□□□□ -0.83
PDLIM5-215ENST00000511586 CPDO75976 1380 aa9.89□□□□□ -0.83
PDLIM5-215ENST00000511586 CARD14Q9BXL6 1004 aa9.89□□□□□ -0.83
PDLIM5-215ENST00000511586 PIK3C2AO00443 1686 aa9.89□□□□□ -0.83
PDLIM5-215ENST00000511586 NRKQ7Z2Y5 1582 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 CRYBG1Q9Y4K1 1723 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 SOX12O15370 315 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 EVA1CP58658 441 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 VPS72Q15906 364 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 COG3Q96JB2 828 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 GJD4Q96KN9 370 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 PHRF1Q9P1Y6 1649 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 ATRNO75882 1429 aa9.88□□□□□ -0.83
PDLIM5-215ENST00000511586 SLIT3O75094 1523 aa9.87□□□□□ -0.83
PDLIM5-215ENST00000511586 ZBTB7CA1YPR0 619 aa9.87□□□□□ -0.83
PDLIM5-215ENST00000511586 FYB1O15117 783 aa9.87□□□□□ -0.83
PDLIM5-215ENST00000511586 ARHGEF25Q86VW2 580 aa9.87□□□□□ -0.83
PDLIM5-215ENST00000511586 COL14A1Q05707 1796 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-215ENST00000511586 KIF7Q2M1P5 1343 aa9.86□□□□□ -0.83
PDLIM5-215ENST00000511586 GGNBP2Q9H3C7 697 aa9.86□□□□□ -0.83
PDLIM5-215ENST00000511586 PANK3Q9H999 370 aa9.86□□□□□ -0.83
PDLIM5-215ENST00000511586 STRN4Q9NRL3 753 aa9.86□□□□□ -0.83
PDLIM5-215ENST00000511586 AATKQ6ZMQ8 1374 aa9.86□□□□□ -0.83
PDLIM5-215ENST00000511586 CDK12Q9NYV4 1490 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 NWD2Q9ULI1 1742 aa9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 OVOS2A0A0J9YW53 1432 aa9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 OVOS2Q6IE36 1432 aa9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 NSD3Q9BZ95 1437 aa9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 MYOM1P52179 1685 aa9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-215ENST00000511586 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
PDLIM5-215ENST00000511586 PLCH1Q4KWH8 1693 aa9.84□□□□□ -0.83
PDLIM5-215ENST00000511586 SOCS7O14512 581 aa9.84□□□□□ -0.83
PDLIM5-215ENST00000511586 CAMTA1Q9Y6Y1 1673 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 NFAT5O94916 1531 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 LARP1Q6PKG0 1096 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 AXIN2Q9Y2T1 843 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
PDLIM5-215ENST00000511586 WASHC2AQ641Q2 1341 aa9.82□□□□□ -0.84
PDLIM5-215ENST00000511586 ONECUT3O60422 494 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms