RNA–Protein interactions for RNA: ENST00000511284.5

TRIM6-210, Transcript of tripartite motif containing 6, human

TSL 5

Gene TRIM6, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-210	ENST00000511284	SLC24A1	O60721	1099 aa		11.63	□□□□□ -0.55
TRIM6-210	ENST00000511284	BRD4	O60885	1362 aa	Predicted RBP	11.63	□□□□□ -0.55
TRIM6-210	ENST00000511284	BCL9L	Q86UU0	1499 aa		11.63	□□□□□ -0.55
TRIM6-210	ENST00000511284	EVC2	Q86UK5	1308 aa		11.62	□□□□□ -0.55
TRIM6-210	ENST00000511284	SRPK2	P78362	688 aa	Known RBP	11.62	□□□□□ -0.55
TRIM6-210	ENST00000511284	CARD11	Q9BXL7	1154 aa		11.62	□□□□□ -0.55
TRIM6-210	ENST00000511284	PUS7	Q96PZ0	661 aa	Known RBP	11.61	□□□□□ -0.55
TRIM6-210	ENST00000511284	PCGF6	Q9BYE7	350 aa		11.61	□□□□□ -0.55
TRIM6-210	ENST00000511284	RALGAPB	Q86X10	1494 aa		11.61	□□□□□ -0.55
TRIM6-210	ENST00000511284	ACE	P12821	1306 aa		11.6	□□□□□ -0.55
TRIM6-210	ENST00000511284	ZNF692	Q9BU19	519 aa	Predicted RBP	11.59	□□□□□ -0.55
TRIM6-210	ENST00000511284	CABP2	Q9NPB3	220 aa		11.59	□□□□□ -0.55
TRIM6-210	ENST00000511284	RGPD8	O14715	1765 aa	Predicted RBP	11.59	□□□□□ -0.55
TRIM6-210	ENST00000511284	LMOD2	Q6P5Q4	547 aa		11.58	□□□□□ -0.56
TRIM6-210	ENST00000511284	PPIP5K1	Q6PFW1	1433 aa		11.58	□□□□□ -0.56
TRIM6-210	ENST00000511284	ITSN1	Q15811	1721 aa		11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	SLIT2	O94813	1529 aa		11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	HAP1	P54257	671 aa	Predicted RBP	11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	UNC5CL	Q8IV45	518 aa		11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	GJD4	Q96KN9	370 aa	Predicted RBP	11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	CABP1	Q9NZU7	370 aa		11.57	□□□□□ -0.56
TRIM6-210	ENST00000511284	DCAF8L1	A6NGE4	600 aa		11.56	□□□□□ -0.56
TRIM6-210	ENST00000511284	PAK3	O75914	559 aa	Predicted RBP	11.56	□□□□□ -0.56
TRIM6-210	ENST00000511284	CABLES1	Q8TDN4	633 aa		11.56	□□□□□ -0.56
TRIM6-210	ENST00000511284	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.56	□□□□□ -0.56
TRIM6-210	ENST00000511284	TOPAZ1	Q8N9V7	1692 aa		11.55	□□□□□ -0.56
TRIM6-210	ENST00000511284	BAG6	P46379	1132 aa		11.55	□□□□□ -0.56
TRIM6-210	ENST00000511284	ALS2	Q96Q42	1657 aa		11.55	□□□□□ -0.56
TRIM6-210	ENST00000511284	QRICH2	Q9H0J4	1663 aa		11.55	□□□□□ -0.56
TRIM6-210	ENST00000511284	FAM83G	A6ND36	823 aa		11.54	□□□□□ -0.56
TRIM6-210	ENST00000511284	R3HDM1	Q15032	1099 aa	Known RBP	11.54	□□□□□ -0.56
TRIM6-210	ENST00000511284	NLRP13	Q86W25	1043 aa		11.54	□□□□□ -0.56
TRIM6-210	ENST00000511284	ABTB2	Q8N961	1025 aa		11.54	□□□□□ -0.56
TRIM6-210	ENST00000511284	BRWD3	Q6RI45	1802 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	USP6	P35125	1406 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	SSH2	Q76I76	1423 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	ONECUT3	O60422	494 aa	Predicted RBP	11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	VPS72	Q15906	364 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	TESK2	Q96S53	571 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	USP19	O94966	1318 aa		11.53	□□□□□ -0.56
TRIM6-210	ENST00000511284	CPSF1	Q10570	1443 aa	Known RBP	11.52	□□□□□ -0.56
TRIM6-210	ENST00000511284	ST20-MTHFS	A0A0A6YYL1	179 aa		11.52	□□□□□ -0.57
TRIM6-210	ENST00000511284	C1QTNF8	P60827	252 aa		11.52	□□□□□ -0.57
TRIM6-210	ENST00000511284	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.52	□□□□□ -0.57
TRIM6-210	ENST00000511284	TTC21A	Q8NDW8	1320 aa		11.51	□□□□□ -0.57
TRIM6-210	ENST00000511284	MARF1	Q9Y4F3	1742 aa	Known RBP	11.51	□□□□□ -0.57
TRIM6-210	ENST00000511284	CPD	O75976	1380 aa		11.51	□□□□□ -0.57
TRIM6-210	ENST00000511284	GC	P02774	474 aa		11.5	□□□□□ -0.57
TRIM6-210	ENST00000511284	CCER1	Q8TC90	406 aa	Predicted RBP	11.5	□□□□□ -0.57
TRIM6-210	ENST00000511284	PRDM11	Q9NQV5	511 aa		11.5	□□□□□ -0.57
TRIM6-210	ENST00000511284	NINL	Q9Y2I6	1382 aa		11.5	□□□□□ -0.57
TRIM6-210	ENST00000511284	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.49	□□□□□ -0.57
TRIM6-210	ENST00000511284	BTG4	Q9NY30	223 aa		11.49	□□□□□ -0.57
TRIM6-210	ENST00000511284	TTC21B	Q7Z4L5	1316 aa		11.49	□□□□□ -0.57
TRIM6-210	ENST00000511284	GLI3	P10071	1580 aa		11.49	□□□□□ -0.57
TRIM6-210	ENST00000511284	NLRP6	P59044	892 aa		11.48	□□□□□ -0.57
TRIM6-210	ENST00000511284	TERF2IP	Q9NYB0	399 aa		11.48	□□□□□ -0.57
TRIM6-210	ENST00000511284	KIAA0232	Q92628	1395 aa		11.48	□□□□□ -0.57
TRIM6-210	ENST00000511284	NWD2	Q9ULI1	1742 aa		11.48	□□□□□ -0.57
TRIM6-210	ENST00000511284	ABCA3	Q99758	1704 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	KTN1	Q86UP2	1357 aa	Known RBP	11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	USP47	Q96K76	1375 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	TMF1	P82094	1093 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	EN1	Q05925	392 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	CDCA8	Q53HL2	280 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	NUTM2G	Q5VZR2	741 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	SEPT12	Q8IYM1	358 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	KCNH5	Q8NCM2	988 aa		11.47	□□□□□ -0.57
TRIM6-210	ENST00000511284	COL14A1	Q05707	1796 aa	Known RBP	11.46	□□□□□ -0.57
TRIM6-210	ENST00000511284	CRYBG1	Q9Y4K1	1723 aa		11.46	□□□□□ -0.57
TRIM6-210	ENST00000511284	PLEKHG5	O94827	1062 aa		11.46	□□□□□ -0.57
TRIM6-210	ENST00000511284	ZC3H6	P61129	1189 aa	Known RBP	11.46	□□□□□ -0.57
TRIM6-210	ENST00000511284	SLC12A5	Q9H2X9	1139 aa		11.46	□□□□□ -0.57
TRIM6-210	ENST00000511284	CD163L1	Q9NR16	1453 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	USP31	Q70CQ4	1352 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	SPATA31A5	Q5VU36	1347 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	SPATA31A7	Q8IWB4	1347 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	KRT27	Q7Z3Y8	459 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	CEP350	Q5VT06	3117 aa		11.45	□□□□□ -0.58
TRIM6-210	ENST00000511284	AATK	Q6ZMQ8	1374 aa		11.44	□□□□□ -0.58
TRIM6-210	ENST00000511284	TMC1	Q8TDI8	760 aa		11.44	□□□□□ -0.58
TRIM6-210	ENST00000511284	SLIT3	O75094	1523 aa		11.44	□□□□□ -0.58
TRIM6-210	ENST00000511284	EDC4	Q6P2E9	1401 aa	Known RBP	11.43	□□□□□ -0.58
TRIM6-210	ENST00000511284	CHRNA2	Q15822	529 aa		11.43	□□□□□ -0.58
TRIM6-210	ENST00000511284	ARHGEF25	Q86VW2	580 aa		11.43	□□□□□ -0.58
TRIM6-210	ENST00000511284	CCDC9	Q9Y3X0	531 aa	Known RBP	11.43	□□□□□ -0.58
TRIM6-210	ENST00000511284	PLCH1	Q4KWH8	1693 aa		11.43	□□□□□ -0.58
TRIM6-210	ENST00000511284	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284	NRK	Q7Z2Y5	1582 aa		11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284	SPATA31A1	Q5TZJ5	1347 aa		11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284	EVA1C	P58658	441 aa		11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284	BARGIN	Q6ZT62	677 aa		11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284	THRAP3	Q9Y2W1	955 aa	Known RBP	11.42	□□□□□ -0.58
TRIM6-210	ENST00000511284		A0A1W2PP64	1363 aa		11.41	□□□□□ -0.58
TRIM6-210	ENST00000511284	CAMTA1	Q9Y6Y1	1673 aa		11.41	□□□□□ -0.58
TRIM6-210	ENST00000511284	AKAP12	Q02952	1782 aa		11.41	□□□□□ -0.58
TRIM6-210	ENST00000511284	ANKRD36B	Q8N2N9	1353 aa		11.41	□□□□□ -0.58
TRIM6-210	ENST00000511284	RGPD1	P0DJD0	1748 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms