RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 PIK3C2BO00750 1634 aa11.47□□□□□ -0.57
SMAD1-210ENST00000511255 SYNMO15061 1565 aa11.47□□□□□ -0.57
SMAD1-210ENST00000511255 ZNF316A6NFI3 1004 aaPredicted RBP11.47□□□□□ -0.57
SMAD1-210ENST00000511255 LSM11P83369 360 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMAD1-210ENST00000511255 WDR70Q9NW82 654 aa11.47□□□□□ -0.57
SMAD1-210ENST00000511255 SLC52A1Q9NWF4 448 aa11.47□□□□□ -0.57
SMAD1-210ENST00000511255 LHX6Q9UPM6 363 aa11.47□□□□□ -0.57
SMAD1-210ENST00000511255 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.57
SMAD1-210ENST00000511255 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.57
SMAD1-210ENST00000511255 CERKQ8TCT0 537 aa11.46□□□□□ -0.57
SMAD1-210ENST00000511255 EID1Q9Y6B2 187 aa11.46□□□□□ -0.57
SMAD1-210ENST00000511255 POLR1AO95602 1720 aaPredicted RBP11.46□□□□□ -0.58
SMAD1-210ENST00000511255 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.58
SMAD1-210ENST00000511255 E9PCH4 1651 aa11.46□□□□□ -0.58
SMAD1-210ENST00000511255 NPHP4O75161 1426 aaPredicted RBP11.45□□□□□ -0.58
SMAD1-210ENST00000511255 ZNF335Q9H4Z2 1342 aaPredicted RBP11.45□□□□□ -0.58
SMAD1-210ENST00000511255 E2F4Q16254 413 aa11.45□□□□□ -0.58
SMAD1-210ENST00000511255 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
SMAD1-210ENST00000511255 NEURL4Q96JN8 1562 aa11.44□□□□□ -0.58
SMAD1-210ENST00000511255 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
SMAD1-210ENST00000511255 TMEM2Q9UHN6 1383 aa11.43□□□□□ -0.58
SMAD1-210ENST00000511255 LTKP29376 864 aa11.43□□□□□ -0.58
SMAD1-210ENST00000511255 MAP3K9P80192 1104 aa11.43□□□□□ -0.58
SMAD1-210ENST00000511255 BCANQ96GW7 911 aa11.43□□□□□ -0.58
SMAD1-210ENST00000511255 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
SMAD1-210ENST00000511255 PPP1R15AO75807 674 aaPredicted RBP11.42□□□□□ -0.58
SMAD1-210ENST00000511255 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
SMAD1-210ENST00000511255 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
SMAD1-210ENST00000511255 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
SMAD1-210ENST00000511255 SLIT1O75093 1534 aa11.41□□□□□ -0.58
SMAD1-210ENST00000511255 MED14O60244 1454 aa11.41□□□□□ -0.58
SMAD1-210ENST00000511255 DPYSL4O14531 572 aa11.41□□□□□ -0.58
SMAD1-210ENST00000511255 EVI5O60447 810 aa11.41□□□□□ -0.58
SMAD1-210ENST00000511255 SETD5Q9C0A6 1442 aa11.41□□□□□ -0.58
SMAD1-210ENST00000511255 IQGAP1P46940 1657 aa11.4□□□□□ -0.58
SMAD1-210ENST00000511255 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
SMAD1-210ENST00000511255 LTBP4Q8N2S1 1624 aa11.39□□□□□ -0.59
SMAD1-210ENST00000511255 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
SMAD1-210ENST00000511255 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
SMAD1-210ENST00000511255 POTEEQ6S8J3 1075 aa11.39□□□□□ -0.59
SMAD1-210ENST00000511255 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
SMAD1-210ENST00000511255 KDM5AP29375 1690 aaKnown RBP11.39□□□□□ -0.59
SMAD1-210ENST00000511255 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
SMAD1-210ENST00000511255 RIMS2Q9UQ26 1411 aa11.38□□□□□ -0.59
SMAD1-210ENST00000511255 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
SMAD1-210ENST00000511255 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMAD1-210ENST00000511255 TMEM131LA2VDJ0 1609 aa11.37□□□□□ -0.59
SMAD1-210ENST00000511255 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
SMAD1-210ENST00000511255 SLC26A8Q96RN1 970 aa11.36□□□□□ -0.59
SMAD1-210ENST00000511255 MPHOSPH9Q99550 1183 aa11.36□□□□□ -0.59
SMAD1-210ENST00000511255 MYO5BQ9ULV0 1848 aa11.36□□□□□ -0.59
SMAD1-210ENST00000511255 ACIN1Q9UKV3 1341 aaKnown RBP11.35□□□□□ -0.59
SMAD1-210ENST00000511255 TRPM2O94759 1503 aa11.35□□□□□ -0.59
SMAD1-210ENST00000511255 ZFYVE9O95405 1425 aa11.35□□□□□ -0.59
SMAD1-210ENST00000511255 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
SMAD1-210ENST00000511255 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
SMAD1-210ENST00000511255 CPS1P31327 1500 aa11.34□□□□□ -0.59
SMAD1-210ENST00000511255 PLEKHG1Q9ULL1 1385 aa11.33□□□□□ -0.6
SMAD1-210ENST00000511255 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
SMAD1-210ENST00000511255 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
SMAD1-210ENST00000511255 PBX2P40425 430 aa11.32□□□□□ -0.6
SMAD1-210ENST00000511255 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
SMAD1-210ENST00000511255 AXIN2Q9Y2T1 843 aa11.32□□□□□ -0.6
SMAD1-210ENST00000511255 CCDC144AA2RUR9 1427 aa11.32□□□□□ -0.6
SMAD1-210ENST00000511255 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
SMAD1-210ENST00000511255 FOSBP53539 338 aa11.31□□□□□ -0.6
SMAD1-210ENST00000511255 PDIA6Q15084 440 aa11.31□□□□□ -0.6
SMAD1-210ENST00000511255 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
SMAD1-210ENST00000511255 KIF1BO60333 1816 aa11.3□□□□□ -0.6
SMAD1-210ENST00000511255 KCNA6P17658 529 aa11.29□□□□□ -0.6
SMAD1-210ENST00000511255 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
SMAD1-210ENST00000511255 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
SMAD1-210ENST00000511255 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
SMAD1-210ENST00000511255 ARHGEF1Q92888 912 aaKnown RBP11.28□□□□□ -0.6
SMAD1-210ENST00000511255 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
SMAD1-210ENST00000511255 PCDHGA10Q9Y5H3 936 aa11.28□□□□□ -0.6
SMAD1-210ENST00000511255 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
SMAD1-210ENST00000511255 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
SMAD1-210ENST00000511255 SPDYE16A6NNV3 312 aaPredicted RBP11.27□□□□□ -0.61
SMAD1-210ENST00000511255 TOM1O60784 492 aa11.27□□□□□ -0.61
SMAD1-210ENST00000511255 HRCP23327 699 aa11.27□□□□□ -0.61
SMAD1-210ENST00000511255 PIP4K2BP78356 416 aa11.27□□□□□ -0.61
SMAD1-210ENST00000511255 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
SMAD1-210ENST00000511255 ADAMTS13Q76LX8 1427 aa11.26□□□□□ -0.61
SMAD1-210ENST00000511255 NEXMIFQ5QGS0 1516 aa11.26□□□□□ -0.61
SMAD1-210ENST00000511255 RBM33Q96EV2 1170 aaKnown RBP11.26□□□□□ -0.61
SMAD1-210ENST00000511255 RPGRIP1LQ68CZ1 1315 aa11.26□□□□□ -0.61
SMAD1-210ENST00000511255 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
SMAD1-210ENST00000511255 DIP2AQ14689 1571 aa11.25□□□□□ -0.61
SMAD1-210ENST00000511255 PHF14O94880 888 aa11.24□□□□□ -0.61
SMAD1-210ENST00000511255 C14orf37Q86TY3 774 aa11.24□□□□□ -0.61
SMAD1-210ENST00000511255 DDX12PQ92771 950 aa11.24□□□□□ -0.61
SMAD1-210ENST00000511255 NKTRP30414 1462 aaKnown RBP11.24□□□□□ -0.61
SMAD1-210ENST00000511255 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
SMAD1-210ENST00000511255 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
SMAD1-210ENST00000511255 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
SMAD1-210ENST00000511255 PIK3R4Q99570 1358 aa11.23□□□□□ -0.61
SMAD1-210ENST00000511255 NWD1Q149M9 1564 aa11.23□□□□□ -0.61
SMAD1-210ENST00000511255 ARHGAP33O14559 1287 aa11.22□□□□□ -0.61
SMAD1-210ENST00000511255 PSEN2P49810 448 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms