RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 A0A1W2PP64 1363 aa13.96□□□□□ -0.18
NEK1-205ENST00000510108 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
NEK1-205ENST00000510108 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
NEK1-205ENST00000510108 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
NEK1-205ENST00000510108 PPIP5K1Q6PFW1 1433 aa13.95□□□□□ -0.18
NEK1-205ENST00000510108 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
NEK1-205ENST00000510108 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
NEK1-205ENST00000510108 AMER1Q5JTC6 1135 aaPredicted RBP13.94□□□□□ -0.18
NEK1-205ENST00000510108 SLC12A5Q9H2X9 1139 aa13.94□□□□□ -0.18
NEK1-205ENST00000510108 DCCP43146 1447 aa13.94□□□□□ -0.18
NEK1-205ENST00000510108 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
NEK1-205ENST00000510108 RALBP1Q15311 655 aa13.93□□□□□ -0.18
NEK1-205ENST00000510108 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
NEK1-205ENST00000510108 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
NEK1-205ENST00000510108 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
NEK1-205ENST00000510108 NSD2O96028 1365 aa13.93□□□□□ -0.18
NEK1-205ENST00000510108 CHADLQ6NUI6 762 aa13.92□□□□□ -0.18
NEK1-205ENST00000510108 NUDT16Q96DE0 195 aaKnown RBP13.92□□□□□ -0.18
NEK1-205ENST00000510108 KNSTRNQ9Y448 316 aa13.92□□□□□ -0.18
NEK1-205ENST00000510108 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
NEK1-205ENST00000510108 TMC1Q8TDI8 760 aa13.91□□□□□ -0.18
NEK1-205ENST00000510108 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
NEK1-205ENST00000510108 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
NEK1-205ENST00000510108 ZNF335Q9H4Z2 1342 aaPredicted RBP13.91□□□□□ -0.18
NEK1-205ENST00000510108 PLEKHG3A1L390 1219 aa13.9□□□□□ -0.18
NEK1-205ENST00000510108 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
NEK1-205ENST00000510108 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
NEK1-205ENST00000510108 PROSER2Q86WR7 435 aaPredicted RBP13.9□□□□□ -0.19
NEK1-205ENST00000510108 CABP1Q9NZU7 370 aa13.9□□□□□ -0.19
NEK1-205ENST00000510108 LRRC7Q96NW7 1537 aa13.89□□□□□ -0.19
NEK1-205ENST00000510108 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
NEK1-205ENST00000510108 MYBBP1AQ9BQG0 1328 aaKnown RBP13.89□□□□□ -0.19
NEK1-205ENST00000510108 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
NEK1-205ENST00000510108 HDGFL2Q7Z4V5 671 aaPredicted RBP13.89□□□□□ -0.19
NEK1-205ENST00000510108 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
NEK1-205ENST00000510108 KIF1AQ12756 1690 aa13.88□□□□□ -0.19
NEK1-205ENST00000510108 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
NEK1-205ENST00000510108 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
NEK1-205ENST00000510108 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
NEK1-205ENST00000510108 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
NEK1-205ENST00000510108 USP6P35125 1406 aa13.86□□□□□ -0.19
NEK1-205ENST00000510108 CC2D1BQ5T0F9 858 aaKnown RBP13.85□□□□□ -0.19
NEK1-205ENST00000510108 IFNLR1Q8IU57 520 aaPredicted RBP13.85□□□□□ -0.19
NEK1-205ENST00000510108 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
NEK1-205ENST00000510108 MST1RQ04912 1400 aa13.84□□□□□ -0.19
NEK1-205ENST00000510108 NLRP13Q86W25 1043 aa13.84□□□□□ -0.19
NEK1-205ENST00000510108 C1orf167Q5SNV9 1468 aa13.83□□□□□ -0.2
NEK1-205ENST00000510108 LTBP4Q8N2S1 1624 aa13.83□□□□□ -0.2
NEK1-205ENST00000510108 MSH6P52701 1360 aa13.83□□□□□ -0.2
NEK1-205ENST00000510108 ACEP12821 1306 aa13.82□□□□□ -0.2
NEK1-205ENST00000510108 ATF3P18847 181 aa13.82□□□□□ -0.2
NEK1-205ENST00000510108 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
NEK1-205ENST00000510108 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
NEK1-205ENST00000510108 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
NEK1-205ENST00000510108 PIK3C2AO00443 1686 aa13.81□□□□□ -0.2
NEK1-205ENST00000510108 OVOS2A0A0J9YW53 1432 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 OVOS2Q6IE36 1432 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 FYB1O15117 783 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 PPP2R1AP30153 589 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 CCDC184Q52MB2 194 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
NEK1-205ENST00000510108 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
NEK1-205ENST00000510108 MARF1Q9Y4F3 1742 aaKnown RBP13.8□□□□□ -0.2
NEK1-205ENST00000510108 TTC21AQ8NDW8 1320 aa13.8□□□□□ -0.2
NEK1-205ENST00000510108 IQSEC2Q5JU85 1478 aa13.79□□□□□ -0.2
NEK1-205ENST00000510108 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
NEK1-205ENST00000510108 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
NEK1-205ENST00000510108 PHF8Q9UPP1 1060 aa13.79□□□□□ -0.2
NEK1-205ENST00000510108 TTC21BQ7Z4L5 1316 aa13.79□□□□□ -0.2
NEK1-205ENST00000510108 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
NEK1-205ENST00000510108 NUTM2FA1L443 756 aa13.78□□□□□ -0.2
NEK1-205ENST00000510108 TOM1O60784 492 aa13.78□□□□□ -0.2
NEK1-205ENST00000510108 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
NEK1-205ENST00000510108 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
NEK1-205ENST00000510108 INSRP06213 1382 aa13.78□□□□□ -0.2
NEK1-205ENST00000510108 USP31Q70CQ4 1352 aa13.78□□□□□ -0.2
NEK1-205ENST00000510108 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
NEK1-205ENST00000510108 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
NEK1-205ENST00000510108 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
NEK1-205ENST00000510108 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
NEK1-205ENST00000510108 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
NEK1-205ENST00000510108 NGDNQ8NEJ9 315 aaKnown RBP13.75□□□□□ -0.21
NEK1-205ENST00000510108 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
NEK1-205ENST00000510108 GGNBP2Q9H3C7 697 aa13.75□□□□□ -0.21
NEK1-205ENST00000510108 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
NEK1-205ENST00000510108 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
NEK1-205ENST00000510108 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
NEK1-205ENST00000510108 NME9Q86XW9 330 aa13.73□□□□□ -0.21
NEK1-205ENST00000510108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.21
NEK1-205ENST00000510108 NHSL1Q5SYE7 1610 aa13.73□□□□□ -0.21
NEK1-205ENST00000510108 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
NEK1-205ENST00000510108 ORAI2Q96SN7 254 aa13.72□□□□□ -0.21
NEK1-205ENST00000510108 PXDNQ92626 1479 aa13.72□□□□□ -0.21
NEK1-205ENST00000510108 CDK12Q9NYV4 1490 aaPredicted RBP13.72□□□□□ -0.21
NEK1-205ENST00000510108 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.21
NEK1-205ENST00000510108 MAP2P11137 1827 aaKnown RBP13.71□□□□□ -0.22
NEK1-205ENST00000510108 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
NEK1-205ENST00000510108 PIP4K2BP78356 416 aa13.7□□□□□ -0.22
NEK1-205ENST00000510108 POTEHQ6S545 545 aa13.7□□□□□ -0.22
NEK1-205ENST00000510108 COG3Q96JB2 828 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms