RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 NRKQ7Z2Y5 1582 aa22.68■■□□□ 1.22
SCAMP1-203ENST00000510030 ACEP12821 1306 aa22.67■■□□□ 1.22
SCAMP1-203ENST00000510030 NGDNQ8NEJ9 315 aaKnown RBP22.67■■□□□ 1.22
SCAMP1-203ENST00000510030 USP6P35125 1406 aa22.66■■□□□ 1.22
SCAMP1-203ENST00000510030 CC2D1BQ5T0F9 858 aaKnown RBP22.66■■□□□ 1.22
SCAMP1-203ENST00000510030 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 NUTM2FA1L443 756 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 NLRP13Q86W25 1043 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 PHF8Q9UPP1 1060 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 C1orf167Q5SNV9 1468 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 MST1RQ04912 1400 aa22.65■■□□□ 1.22
SCAMP1-203ENST00000510030 MORC1Q86VD1 984 aa22.62■■□□□ 1.21
SCAMP1-203ENST00000510030 ESCO1Q5FWF5 840 aa22.61■■□□□ 1.21
SCAMP1-203ENST00000510030 PHLPP1O60346 1717 aa22.6■■□□□ 1.21
SCAMP1-203ENST00000510030 SLAIN2Q9P270 581 aa22.6■■□□□ 1.21
SCAMP1-203ENST00000510030 PMFBP1Q8TBY8 1022 aa22.58■■□□□ 1.21
SCAMP1-203ENST00000510030 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
SCAMP1-203ENST00000510030 FYB1O15117 783 aa22.57■■□□□ 1.2
SCAMP1-203ENST00000510030 POTEAQ6S8J7 498 aa22.57■■□□□ 1.2
SCAMP1-203ENST00000510030 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
SCAMP1-203ENST00000510030 TTC21BQ7Z4L5 1316 aa22.57■■□□□ 1.2
SCAMP1-203ENST00000510030 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
SCAMP1-203ENST00000510030 USP54Q70EL1 1684 aa22.55■■□□□ 1.2
SCAMP1-203ENST00000510030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.55■■□□□ 1.2
SCAMP1-203ENST00000510030 COG3Q96JB2 828 aa22.55■■□□□ 1.2
SCAMP1-203ENST00000510030 COL16A1Q07092 1604 aaPredicted RBP22.55■■□□□ 1.2
SCAMP1-203ENST00000510030 PSME1Q06323 249 aa22.54■■□□□ 1.2
SCAMP1-203ENST00000510030 PPP2R1AP30153 589 aa22.53■■□□□ 1.2
SCAMP1-203ENST00000510030 NPHP3Q7Z494 1330 aa22.53■■□□□ 1.2
SCAMP1-203ENST00000510030 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
SCAMP1-203ENST00000510030 LRP6O75581 1613 aa22.51■■□□□ 1.19
SCAMP1-203ENST00000510030 GGNBP2Q9H3C7 697 aa22.51■■□□□ 1.19
SCAMP1-203ENST00000510030 OVOS2A0A0J9YW53 1432 aa22.5■■□□□ 1.19
SCAMP1-203ENST00000510030 OVOS2Q6IE36 1432 aa22.5■■□□□ 1.19
SCAMP1-203ENST00000510030 ORAI2Q96SN7 254 aa22.5■■□□□ 1.19
SCAMP1-203ENST00000510030 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
SCAMP1-203ENST00000510030 PIK3C2AO00443 1686 aa22.49■■□□□ 1.19
SCAMP1-203ENST00000510030 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
SCAMP1-203ENST00000510030 NME9Q86XW9 330 aa22.47■■□□□ 1.19
SCAMP1-203ENST00000510030 TRPM3Q9HCF6 1732 aaPredicted RBP22.47■■□□□ 1.19
SCAMP1-203ENST00000510030 JCADQ9P266 1359 aa22.47■■□□□ 1.19
SCAMP1-203ENST00000510030 SBNO1A3KN83 1393 aa22.46■■□□□ 1.19
SCAMP1-203ENST00000510030 FOXO3O43524 673 aa22.45■■□□□ 1.18
SCAMP1-203ENST00000510030 PAK3O75914 559 aaPredicted RBP22.44■■□□□ 1.18
SCAMP1-203ENST00000510030 INSRP06213 1382 aa22.44■■□□□ 1.18
SCAMP1-203ENST00000510030 BRINP3Q76B58 766 aa22.44■■□□□ 1.18
SCAMP1-203ENST00000510030 ABTB2Q8N961 1025 aa22.44■■□□□ 1.18
SCAMP1-203ENST00000510030 AHDC1Q5TGY3 1603 aaPredicted RBP22.43■■□□□ 1.18
SCAMP1-203ENST00000510030 SMG6Q86US8 1419 aaKnown RBP22.43■■□□□ 1.18
SCAMP1-203ENST00000510030 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
SCAMP1-203ENST00000510030 DDX17Q92841 729 aaKnown RBP22.43■■□□□ 1.18
SCAMP1-203ENST00000510030 NHSL1Q5SYE7 1610 aa22.42■■□□□ 1.18
SCAMP1-203ENST00000510030 ARHGEF10O15013 1369 aa22.41■■□□□ 1.18
SCAMP1-203ENST00000510030 TNNT2P45379 298 aaPredicted RBP22.41■■□□□ 1.18
SCAMP1-203ENST00000510030 NLRP6P59044 892 aa22.41■■□□□ 1.18
SCAMP1-203ENST00000510030 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
SCAMP1-203ENST00000510030 PXDNQ92626 1479 aa22.41■■□□□ 1.18
SCAMP1-203ENST00000510030 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
SCAMP1-203ENST00000510030 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
SCAMP1-203ENST00000510030 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
SCAMP1-203ENST00000510030 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
SCAMP1-203ENST00000510030 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.17
SCAMP1-203ENST00000510030 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
SCAMP1-203ENST00000510030 MTHFSP49914 203 aa22.38■■□□□ 1.17
SCAMP1-203ENST00000510030 WDR43Q15061 677 aaKnown RBP eCLIP22.38■■□□□ 1.17
SCAMP1-203ENST00000510030 MARF1Q9Y4F3 1742 aaKnown RBP22.37■■□□□ 1.17
SCAMP1-203ENST00000510030 NUTM2BA6NNL0 878 aaPredicted RBP22.36■■□□□ 1.17
SCAMP1-203ENST00000510030 NUTM2EB1AL46 878 aaPredicted RBP22.36■■□□□ 1.17
SCAMP1-203ENST00000510030 CCDC184Q52MB2 194 aa22.36■■□□□ 1.17
SCAMP1-203ENST00000510030 NUTM2AQ8IVF1 878 aaPredicted RBP22.36■■□□□ 1.17
SCAMP1-203ENST00000510030 SHPRHQ149N8 1683 aa22.36■■□□□ 1.17
SCAMP1-203ENST00000510030 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
SCAMP1-203ENST00000510030 NUDCQ9Y266 331 aa22.35■■□□□ 1.17
SCAMP1-203ENST00000510030 SLIT3O75094 1523 aa22.35■■□□□ 1.17
SCAMP1-203ENST00000510030 PNPLA6Q8IY17 1366 aa22.35■■□□□ 1.17
SCAMP1-203ENST00000510030 SOS2Q07890 1332 aaPredicted RBP22.34■■□□□ 1.17
SCAMP1-203ENST00000510030 MEX3CQ5U5Q3 659 aaKnown RBP22.34■■□□□ 1.17
SCAMP1-203ENST00000510030 RTL1A6NKG5 1358 aa22.33■■□□□ 1.17
SCAMP1-203ENST00000510030 USP19O94966 1318 aa22.32■■□□□ 1.16
SCAMP1-203ENST00000510030 PHRF1Q9P1Y6 1649 aaKnown RBP22.32■■□□□ 1.16
SCAMP1-203ENST00000510030 POLKQ9UBT6 870 aa22.32■■□□□ 1.16
SCAMP1-203ENST00000510030 ZRANB1Q9UGI0 708 aa22.32■■□□□ 1.16
SCAMP1-203ENST00000510030 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
SCAMP1-203ENST00000510030 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
SCAMP1-203ENST00000510030 COL3A1P02461 1466 aaPredicted RBP22.3■■□□□ 1.16
SCAMP1-203ENST00000510030 FLT4P35916 1363 aa22.3■■□□□ 1.16
SCAMP1-203ENST00000510030 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
SCAMP1-203ENST00000510030 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
SCAMP1-203ENST00000510030 NFAT5O94916 1531 aa22.29■■□□□ 1.16
SCAMP1-203ENST00000510030 ABCC6O95255 1503 aa22.28■■□□□ 1.16
SCAMP1-203ENST00000510030 DIAPH1O60610 1272 aaKnown RBP22.28■■□□□ 1.16
SCAMP1-203ENST00000510030 YTHDC1Q96MU7 727 aaKnown RBP22.28■■□□□ 1.16
SCAMP1-203ENST00000510030 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
SCAMP1-203ENST00000510030 LTN1O94822 1766 aa22.27■■□□□ 1.16
SCAMP1-203ENST00000510030 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
SCAMP1-203ENST00000510030 PPM1GO15355 546 aaPredicted RBP22.26■■□□□ 1.15
SCAMP1-203ENST00000510030 CENPBP07199 599 aaPredicted RBP22.25■■□□□ 1.15
SCAMP1-203ENST00000510030 NUTM2GQ5VZR2 741 aa22.25■■□□□ 1.15
SCAMP1-203ENST00000510030 LRRC59Q96AG4 307 aaKnown RBP22.25■■□□□ 1.15
SCAMP1-203ENST00000510030 EMILIN1Q9Y6C2 1016 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms