RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 DDX17Q92841 729 aaKnown RBP21.56■■□□□ 1.04
APBB3-214ENST00000509914 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.56■■□□□ 1.04
APBB3-214ENST00000509914 ANP32CO43423 234 aa21.55■■□□□ 1.04
APBB3-214ENST00000509914 PSME1Q06323 249 aa21.55■■□□□ 1.04
APBB3-214ENST00000509914 CC2D1BQ5T0F9 858 aaKnown RBP21.55■■□□□ 1.04
APBB3-214ENST00000509914 CGNL1Q0VF96 1302 aa21.55■■□□□ 1.04
APBB3-214ENST00000509914 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
APBB3-214ENST00000509914 NRKQ7Z2Y5 1582 aa21.55■■□□□ 1.04
APBB3-214ENST00000509914 NPC1L1Q9UHC9 1359 aa21.54■■□□□ 1.04
APBB3-214ENST00000509914 FYB1O15117 783 aa21.54■■□□□ 1.04
APBB3-214ENST00000509914 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
APBB3-214ENST00000509914 TOM1O60784 492 aa21.53■■□□□ 1.04
APBB3-214ENST00000509914 KRT28Q7Z3Y7 464 aa21.52■■□□□ 1.04
APBB3-214ENST00000509914 NME9Q86XW9 330 aa21.51■■□□□ 1.03
APBB3-214ENST00000509914 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
APBB3-214ENST00000509914 NPHP3Q7Z494 1330 aa21.51■■□□□ 1.03
APBB3-214ENST00000509914 UBAP1LF5GYI3 381 aa21.51■■□□□ 1.03
APBB3-214ENST00000509914 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
APBB3-214ENST00000509914 ZRANB1Q9UGI0 708 aa21.5■■□□□ 1.03
APBB3-214ENST00000509914 BRD4O60885 1362 aaPredicted RBP21.5■■□□□ 1.03
APBB3-214ENST00000509914 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
APBB3-214ENST00000509914 PXDNQ92626 1479 aa21.49■■□□□ 1.03
APBB3-214ENST00000509914 ROBO1Q9Y6N7 1651 aa21.49■■□□□ 1.03
APBB3-214ENST00000509914 NSD2O96028 1365 aa21.49■■□□□ 1.03
APBB3-214ENST00000509914 PAK3O75914 559 aaPredicted RBP21.48■■□□□ 1.03
APBB3-214ENST00000509914 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
APBB3-214ENST00000509914 PIP4K2BP78356 416 aa21.46■■□□□ 1.03
APBB3-214ENST00000509914 TRPM3Q9HCF6 1732 aaPredicted RBP21.46■■□□□ 1.03
APBB3-214ENST00000509914 SOS2Q07890 1332 aaPredicted RBP21.46■■□□□ 1.03
APBB3-214ENST00000509914 NHSL1Q5SYE7 1610 aa21.45■■□□□ 1.02
APBB3-214ENST00000509914 RALBP1Q15311 655 aa21.45■■□□□ 1.02
APBB3-214ENST00000509914 SBNO1A3KN83 1393 aa21.44■■□□□ 1.02
APBB3-214ENST00000509914 PIK3C2AO00443 1686 aa21.44■■□□□ 1.02
APBB3-214ENST00000509914 KIF20BQ96Q89 1820 aa21.44■■□□□ 1.02
APBB3-214ENST00000509914 MORC1Q86VD1 984 aa21.44■■□□□ 1.02
APBB3-214ENST00000509914 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
APBB3-214ENST00000509914 USP31Q70CQ4 1352 aa21.43■■□□□ 1.02
APBB3-214ENST00000509914 NUTM2GQ5VZR2 741 aa21.43■■□□□ 1.02
APBB3-214ENST00000509914 OVOS2A0A0J9YW53 1432 aa21.42■■□□□ 1.02
APBB3-214ENST00000509914 OVOS2Q6IE36 1432 aa21.42■■□□□ 1.02
APBB3-214ENST00000509914 COG3Q96JB2 828 aa21.41■■□□□ 1.02
APBB3-214ENST00000509914 SPATA31A3Q5VYP0 1347 aa21.41■■□□□ 1.02
APBB3-214ENST00000509914 AHDC1Q5TGY3 1603 aaPredicted RBP21.41■■□□□ 1.02
APBB3-214ENST00000509914 NLRP6P59044 892 aa21.41■■□□□ 1.02
APBB3-214ENST00000509914 TNS3Q68CZ2 1445 aa21.4■■□□□ 1.02
APBB3-214ENST00000509914 TNNT2P45379 298 aaPredicted RBP21.39■■□□□ 1.02
APBB3-214ENST00000509914 ANKRD26Q9UPS8 1709 aa21.39■■□□□ 1.02
APBB3-214ENST00000509914 ALS2Q96Q42 1657 aa21.39■■□□□ 1.01
APBB3-214ENST00000509914 LMOD2Q6P5Q4 547 aa21.39■■□□□ 1.01
APBB3-214ENST00000509914 MYBBP1AQ9BQG0 1328 aaKnown RBP21.38■■□□□ 1.01
APBB3-214ENST00000509914 FBLN1P23142 703 aa21.38■■□□□ 1.01
APBB3-214ENST00000509914 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
APBB3-214ENST00000509914 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
APBB3-214ENST00000509914 NLRP13Q86W25 1043 aa21.36■■□□□ 1.01
APBB3-214ENST00000509914 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
APBB3-214ENST00000509914 CCDC184Q52MB2 194 aa21.34■■□□□ 1.01
APBB3-214ENST00000509914 ARHGEF10O15013 1369 aa21.33■■□□□ 1.01
APBB3-214ENST00000509914 USP19O94966 1318 aa21.33■■□□□ 1.01
APBB3-214ENST00000509914 BCL11AQ9H165 835 aa21.33■■□□□ 1
APBB3-214ENST00000509914 COL16A1Q07092 1604 aaPredicted RBP21.32■■□□□ 1
APBB3-214ENST00000509914 LRRC59Q96AG4 307 aaKnown RBP21.32■■□□□ 1
APBB3-214ENST00000509914 AATKQ6ZMQ8 1374 aa21.32■■□□□ 1
APBB3-214ENST00000509914 MED1Q15648 1581 aaPredicted RBP21.32■■□□□ 1
APBB3-214ENST00000509914 SOX12O15370 315 aa21.31■■□□□ 1
APBB3-214ENST00000509914 PLEKHG5O94827 1062 aa21.31■■□□□ 1
APBB3-214ENST00000509914 PHLPP1O60346 1717 aa21.31■■□□□ 1
APBB3-214ENST00000509914 POLKQ9UBT6 870 aa21.31■■□□□ 1
APBB3-214ENST00000509914 SLIT3O75094 1523 aa21.3■■□□□ 1
APBB3-214ENST00000509914 MTHFSP49914 203 aa21.29■■□□□ 1
APBB3-214ENST00000509914 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
APBB3-214ENST00000509914 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
APBB3-214ENST00000509914 GCP02774 474 aa21.29■■□□□ 1
APBB3-214ENST00000509914 NFAT5O94916 1531 aa21.28■■□□□ 1
APBB3-214ENST00000509914 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
APBB3-214ENST00000509914 KCNH5Q8NCM2 988 aa21.27■■□□□ 1
APBB3-214ENST00000509914 PNPLA6Q8IY17 1366 aa21.26■□□□□ 0.99
APBB3-214ENST00000509914 MAP3K19Q56UN5 1328 aa21.25■□□□□ 0.99
APBB3-214ENST00000509914 SMG6Q86US8 1419 aaKnown RBP21.25■□□□□ 0.99
APBB3-214ENST00000509914 CRYBG1Q9Y4K1 1723 aa21.25■□□□□ 0.99
APBB3-214ENST00000509914 MRS2Q9HD23 443 aa21.24■□□□□ 0.99
APBB3-214ENST00000509914 PHRF1Q9P1Y6 1649 aaKnown RBP21.23■□□□□ 0.99
APBB3-214ENST00000509914 HSPA1LP34931 641 aa21.23■□□□□ 0.99
APBB3-214ENST00000509914 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
APBB3-214ENST00000509914 COL22A1Q8NFW1 1626 aaPredicted RBP21.21■□□□□ 0.99
APBB3-214ENST00000509914 ARHGEF25Q86VW2 580 aa21.21■□□□□ 0.99
APBB3-214ENST00000509914 MAP2P11137 1827 aaKnown RBP21.21■□□□□ 0.99
APBB3-214ENST00000509914 ZC3H6P61129 1189 aaKnown RBP21.21■□□□□ 0.99
APBB3-214ENST00000509914 PEAK1Q9H792 1746 aa21.2■□□□□ 0.98
APBB3-214ENST00000509914 INSRP06213 1382 aa21.19■□□□□ 0.98
APBB3-214ENST00000509914 CDK12Q9NYV4 1490 aaPredicted RBP21.19■□□□□ 0.98
APBB3-214ENST00000509914 ABCA3Q99758 1704 aa21.18■□□□□ 0.98
APBB3-214ENST00000509914 COL3A1P02461 1466 aaPredicted RBP21.18■□□□□ 0.98
APBB3-214ENST00000509914 AMPHP49418 695 aa21.17■□□□□ 0.98
APBB3-214ENST00000509914 JCADQ9P266 1359 aa21.17■□□□□ 0.98
APBB3-214ENST00000509914 HSP90AB2PQ58FF8 381 aa21.17■□□□□ 0.98
APBB3-214ENST00000509914 PNISRQ8TF01 805 aaKnown RBP21.17■□□□□ 0.98
APBB3-214ENST00000509914 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
APBB3-214ENST00000509914 CPDO75976 1380 aa21.16■□□□□ 0.98
APBB3-214ENST00000509914 FLT4P35916 1363 aa21.16■□□□□ 0.98
APBB3-214ENST00000509914 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms