RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PCDHGA4Q9Y5G9 962 aa7.94□□□□□ -1.14
NEK1-204ENST00000509912 SPDYE5A6NIY4 337 aa7.94□□□□□ -1.14
NEK1-204ENST00000509912 SPIRE2Q8WWL2 714 aa7.94□□□□□ -1.14
NEK1-204ENST00000509912 L3MBTL3Q96JM7 780 aaPredicted RBP7.94□□□□□ -1.14
NEK1-204ENST00000509912 HMX1Q9NP08 348 aaPredicted RBP7.94□□□□□ -1.14
NEK1-204ENST00000509912 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
NEK1-204ENST00000509912 SERPINA10Q9UK55 444 aa7.93□□□□□ -1.14
NEK1-204ENST00000509912 EHBP1L1Q8N3D4 1523 aa7.93□□□□□ -1.14
NEK1-204ENST00000509912 CEP162Q5TB80 1403 aa7.93□□□□□ -1.14
NEK1-204ENST00000509912 RIC3Q7Z5B4 369 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 PTPRTO14522 1441 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 IER5LQ5T953 404 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 RSPH4AQ5TD94 716 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 CDCA7LQ96GN5 454 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 CDC42BPAQ5VT25 1732 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 CAMSAP2Q08AD1 1489 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
NEK1-204ENST00000509912 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
NEK1-204ENST00000509912 RCCD1A6NED2 376 aa7.91□□□□□ -1.14
NEK1-204ENST00000509912 COL9A1P20849 921 aa7.91□□□□□ -1.14
NEK1-204ENST00000509912 CDK11AQ9UQ88 783 aaPredicted RBP7.91□□□□□ -1.14
NEK1-204ENST00000509912 RNF17Q9BXT8 1623 aaKnown RBP7.91□□□□□ -1.14
NEK1-204ENST00000509912 ARSIQ5FYB1 569 aa7.9□□□□□ -1.15
NEK1-204ENST00000509912 EPS8L1Q8TE68 723 aa7.9□□□□□ -1.15
NEK1-204ENST00000509912 PLA2R1Q13018 1463 aa7.9□□□□□ -1.15
NEK1-204ENST00000509912 LMTK3Q96Q04 1460 aa7.9□□□□□ -1.15
NEK1-204ENST00000509912 EPAS1Q99814 870 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 METRNQ9UJH8 293 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 PTPRMP28827 1452 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 RBM25P49756 843 aaKnown RBP7.89□□□□□ -1.15
NEK1-204ENST00000509912 FOSBP53539 338 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 NUTM2BA6NNL0 878 aaPredicted RBP7.89□□□□□ -1.15
NEK1-204ENST00000509912 NUTM2EB1AL46 878 aaPredicted RBP7.89□□□□□ -1.15
NEK1-204ENST00000509912 GABBR2O75899 941 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 OATP04181 439 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 NUTM2DQ5VT03 806 aaPredicted RBP7.89□□□□□ -1.15
NEK1-204ENST00000509912 NUTM2AQ8IVF1 878 aaPredicted RBP7.89□□□□□ -1.15
NEK1-204ENST00000509912 DCBLD2Q96PD2 775 aa7.89□□□□□ -1.15
NEK1-204ENST00000509912 SHANK2Q9UPX8 1470 aa7.88□□□□□ -1.15
NEK1-204ENST00000509912 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
NEK1-204ENST00000509912 NUDT18Q6ZVK8 323 aa7.88□□□□□ -1.15
NEK1-204ENST00000509912 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 USP17L8P0C7I0 530 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 MFAP1P55081 439 aaKnown RBP7.87□□□□□ -1.15
NEK1-204ENST00000509912 FBXW7Q969H0 707 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 SAMD9LQ8IVG5 1584 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 PTPN23Q9H3S7 1636 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 PLEKHD1A6NEE1 506 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 DEPDC5O75140 1603 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 HDGFL1Q5TGJ6 251 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 TMCO4Q5TGY1 634 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 MIA2Q96PC5 1412 aa7.87□□□□□ -1.15
NEK1-204ENST00000509912 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
NEK1-204ENST00000509912 PROX2Q3B8N5 592 aa7.86□□□□□ -1.15
NEK1-204ENST00000509912 RSBN1LQ6PCB5 846 aaPredicted RBP7.86□□□□□ -1.15
NEK1-204ENST00000509912 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
NEK1-204ENST00000509912 SETD1BQ9UPS6 1966 aaKnown RBP7.86□□□□□ -1.15
NEK1-204ENST00000509912 LRRN4Q8WUT4 740 aa7.86□□□□□ -1.15
NEK1-204ENST00000509912 SYMPKQ92797 1274 aaKnown RBP7.86□□□□□ -1.15
NEK1-204ENST00000509912 LMTK2Q8IWU2 1503 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 PRSS12P56730 875 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 ABCA6Q8N139 1617 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 GPR37L1O60883 481 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 NUTM1Q86Y26 1132 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 RDH13Q8NBN7 331 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 MADDQ8WXG6 1647 aa7.85□□□□□ -1.15
NEK1-204ENST00000509912 SUPT6HQ7KZ85 1726 aaKnown RBP7.84□□□□□ -1.15
NEK1-204ENST00000509912 SLC34A2O95436 690 aa7.84□□□□□ -1.15
NEK1-204ENST00000509912 CD46P15529 392 aa7.84□□□□□ -1.15
NEK1-204ENST00000509912 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
NEK1-204ENST00000509912 TCOF1Q13428 1488 aaKnown RBP7.84□□□□□ -1.16
NEK1-204ENST00000509912 POTEIP0CG38 1075 aa7.83□□□□□ -1.16
NEK1-204ENST00000509912 RGS22Q8NE09 1264 aa7.83□□□□□ -1.16
NEK1-204ENST00000509912 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
NEK1-204ENST00000509912 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
NEK1-204ENST00000509912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.83□□□□□ -1.16
NEK1-204ENST00000509912 ZNF710Q8N1W2 664 aa7.83□□□□□ -1.16
NEK1-204ENST00000509912 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
NEK1-204ENST00000509912 ARHGAP31Q2M1Z3 1444 aa7.82□□□□□ -1.16
NEK1-204ENST00000509912 GJD4Q96KN9 370 aaPredicted RBP7.82□□□□□ -1.16
NEK1-204ENST00000509912 SIGLEC1Q9BZZ2 1709 aa7.82□□□□□ -1.16
NEK1-204ENST00000509912 TIAM1Q13009 1591 aa7.82□□□□□ -1.16
NEK1-204ENST00000509912 CROCC2H7BZ55 1655 aa7.82□□□□□ -1.16
NEK1-204ENST00000509912 ACIN1Q9UKV3 1341 aaKnown RBP7.81□□□□□ -1.16
NEK1-204ENST00000509912 MBD5Q9P267 1494 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 PNMA3Q9UL41 463 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 C3P01024 1663 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 VWDEQ8N2E2 1590 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 TTC13Q8NBP0 860 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 KCNH8Q96L42 1107 aa7.81□□□□□ -1.16
NEK1-204ENST00000509912 EYA1Q99502 592 aa7.8□□□□□ -1.16
NEK1-204ENST00000509912 LHX6Q9UPM6 363 aa7.8□□□□□ -1.16
NEK1-204ENST00000509912 RIMS1Q86UR5 1692 aaKnown RBP7.8□□□□□ -1.16
NEK1-204ENST00000509912 MED14O60244 1454 aa7.8□□□□□ -1.16
NEK1-204ENST00000509912 ATP7AQ04656 1500 aa7.8□□□□□ -1.16
NEK1-204ENST00000509912 LILRB3O75022 631 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms