RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
CYSTM1-204ENST00000509789 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
CYSTM1-204ENST00000509789 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
CYSTM1-204ENST00000509789 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
CYSTM1-204ENST00000509789 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
CYSTM1-204ENST00000509789 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CYSTM1-204ENST00000509789 USP6P35125 1406 aa18.92■□□□□ 0.62
CYSTM1-204ENST00000509789 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
CYSTM1-204ENST00000509789 PIP4K2BP78356 416 aa18.92■□□□□ 0.62
CYSTM1-204ENST00000509789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
CYSTM1-204ENST00000509789 TTC21BQ7Z4L5 1316 aa18.91■□□□□ 0.62
CYSTM1-204ENST00000509789 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
CYSTM1-204ENST00000509789 XPCQ01831 940 aaPredicted RBP18.9■□□□□ 0.62
CYSTM1-204ENST00000509789 TTC21AQ8NDW8 1320 aa18.9■□□□□ 0.62
CYSTM1-204ENST00000509789 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
CYSTM1-204ENST00000509789 AMER1Q5JTC6 1135 aaPredicted RBP18.89■□□□□ 0.61
CYSTM1-204ENST00000509789 DDX17Q92841 729 aaKnown RBP18.89■□□□□ 0.61
CYSTM1-204ENST00000509789 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
CYSTM1-204ENST00000509789 NPC1L1Q9UHC9 1359 aa18.88■□□□□ 0.61
CYSTM1-204ENST00000509789 FYB1O15117 783 aa18.87■□□□□ 0.61
CYSTM1-204ENST00000509789 ANP32CO43423 234 aa18.87■□□□□ 0.61
CYSTM1-204ENST00000509789 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
CYSTM1-204ENST00000509789 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
CYSTM1-204ENST00000509789 MON2Q7Z3U7 1717 aa18.86■□□□□ 0.61
CYSTM1-204ENST00000509789 NME9Q86XW9 330 aa18.86■□□□□ 0.61
CYSTM1-204ENST00000509789 NSD2O96028 1365 aa18.85■□□□□ 0.61
CYSTM1-204ENST00000509789 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
CYSTM1-204ENST00000509789 SBNO1A3KN83 1393 aa18.84■□□□□ 0.61
CYSTM1-204ENST00000509789 SOS2Q07890 1332 aaPredicted RBP18.84■□□□□ 0.61
CYSTM1-204ENST00000509789 LMOD2Q6P5Q4 547 aa18.84■□□□□ 0.61
CYSTM1-204ENST00000509789 MORC1Q86VD1 984 aa18.84■□□□□ 0.61
CYSTM1-204ENST00000509789 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
CYSTM1-204ENST00000509789 ROBO1Q9Y6N7 1651 aa18.83■□□□□ 0.61
CYSTM1-204ENST00000509789 COG3Q96JB2 828 aa18.83■□□□□ 0.6
CYSTM1-204ENST00000509789 NLRP6P59044 892 aa18.82■□□□□ 0.6
CYSTM1-204ENST00000509789 RALBP1Q15311 655 aa18.82■□□□□ 0.6
CYSTM1-204ENST00000509789 PXDNQ92626 1479 aa18.82■□□□□ 0.6
CYSTM1-204ENST00000509789 NLRP13Q86W25 1043 aa18.81■□□□□ 0.6
CYSTM1-204ENST00000509789 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
CYSTM1-204ENST00000509789 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
CYSTM1-204ENST00000509789 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
CYSTM1-204ENST00000509789 NUTM2GQ5VZR2 741 aa18.8■□□□□ 0.6
CYSTM1-204ENST00000509789 LRRC59Q96AG4 307 aaKnown RBP18.8■□□□□ 0.6
CYSTM1-204ENST00000509789 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
CYSTM1-204ENST00000509789 USP31Q70CQ4 1352 aa18.8■□□□□ 0.6
CYSTM1-204ENST00000509789 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
CYSTM1-204ENST00000509789 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
CYSTM1-204ENST00000509789 TNS3Q68CZ2 1445 aa18.78■□□□□ 0.6
CYSTM1-204ENST00000509789 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
CYSTM1-204ENST00000509789 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
CYSTM1-204ENST00000509789 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-204ENST00000509789 TRPM3Q9HCF6 1732 aaPredicted RBP18.76■□□□□ 0.59
CYSTM1-204ENST00000509789 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
CYSTM1-204ENST00000509789 MIER1Q8N108 512 aa18.74■□□□□ 0.59
CYSTM1-204ENST00000509789 OVOS2A0A0J9YW53 1432 aa18.74■□□□□ 0.59
CYSTM1-204ENST00000509789 OVOS2Q6IE36 1432 aa18.74■□□□□ 0.59
CYSTM1-204ENST00000509789 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
CYSTM1-204ENST00000509789 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
CYSTM1-204ENST00000509789 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
CYSTM1-204ENST00000509789 PIK3C2AO00443 1686 aa18.73■□□□□ 0.59
CYSTM1-204ENST00000509789 PHLPP1O60346 1717 aa18.72■□□□□ 0.59
CYSTM1-204ENST00000509789 PPP2R1AP30153 589 aa18.72■□□□□ 0.59
CYSTM1-204ENST00000509789 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
CYSTM1-204ENST00000509789 SOX12O15370 315 aa18.71■□□□□ 0.59
CYSTM1-204ENST00000509789 USP19O94966 1318 aa18.71■□□□□ 0.59
CYSTM1-204ENST00000509789 GCP02774 474 aa18.7■□□□□ 0.58
CYSTM1-204ENST00000509789 ANKRD26Q9UPS8 1709 aa18.7■□□□□ 0.58
CYSTM1-204ENST00000509789 HSPA1LP34931 641 aa18.69■□□□□ 0.58
CYSTM1-204ENST00000509789 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
CYSTM1-204ENST00000509789 AATKQ6ZMQ8 1374 aa18.68■□□□□ 0.58
CYSTM1-204ENST00000509789 FBLN1P23142 703 aa18.68■□□□□ 0.58
CYSTM1-204ENST00000509789 CABLES1Q8TDN4 633 aa18.68■□□□□ 0.58
CYSTM1-204ENST00000509789 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
CYSTM1-204ENST00000509789 KCNA4P22459 653 aa18.67■□□□□ 0.58
CYSTM1-204ENST00000509789 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
CYSTM1-204ENST00000509789 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
CYSTM1-204ENST00000509789 MTHFSP49914 203 aa18.66■□□□□ 0.58
CYSTM1-204ENST00000509789 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
CYSTM1-204ENST00000509789 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
CYSTM1-204ENST00000509789 USP54Q70EL1 1684 aa18.66■□□□□ 0.58
CYSTM1-204ENST00000509789 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
CYSTM1-204ENST00000509789 RRS1Q15050 365 aaKnown RBP18.65■□□□□ 0.58
CYSTM1-204ENST00000509789 JCADQ9P266 1359 aa18.65■□□□□ 0.58
CYSTM1-204ENST00000509789 SLIT3O75094 1523 aa18.64■□□□□ 0.58
CYSTM1-204ENST00000509789 AMPHP49418 695 aa18.64■□□□□ 0.57
CYSTM1-204ENST00000509789 CFAP53Q96M91 514 aa18.64■□□□□ 0.57
CYSTM1-204ENST00000509789 MED1Q15648 1581 aaPredicted RBP18.64■□□□□ 0.57
CYSTM1-204ENST00000509789 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
CYSTM1-204ENST00000509789 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
CYSTM1-204ENST00000509789 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
CYSTM1-204ENST00000509789 MAP3K19Q56UN5 1328 aa18.63■□□□□ 0.57
CYSTM1-204ENST00000509789 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
CYSTM1-204ENST00000509789 MARF1Q9Y4F3 1742 aaKnown RBP18.62■□□□□ 0.57
CYSTM1-204ENST00000509789 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
CYSTM1-204ENST00000509789 NFAT5O94916 1531 aa18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 MAP2P11137 1827 aaKnown RBP18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 NUTM2BA6NNL0 878 aaPredicted RBP18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 NUTM2EB1AL46 878 aaPredicted RBP18.59■□□□□ 0.57
CYSTM1-204ENST00000509789 NUTM2AQ8IVF1 878 aaPredicted RBP18.59■□□□□ 0.57
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