RNA–Protein interactions for RNA: ENST00000509677.5

SH3BP2-214, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-214ENST00000509677 USP21Q9UK80 565 aa25.54■■□□□ 1.68
SH3BP2-214ENST00000509677 TOPAZ1Q8N9V7 1692 aa25.53■■□□□ 1.68
SH3BP2-214ENST00000509677 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
SH3BP2-214ENST00000509677 SBNO1A3KN83 1393 aa25.53■■□□□ 1.68
SH3BP2-214ENST00000509677 POLR3AO14802 1390 aaPredicted RBP25.53■■□□□ 1.68
SH3BP2-214ENST00000509677 TMF1P82094 1093 aa25.52■■□□□ 1.68
SH3BP2-214ENST00000509677 TNS3Q68CZ2 1445 aa25.52■■□□□ 1.68
SH3BP2-214ENST00000509677 EP400Q96L91 3159 aa25.52■■□□□ 1.68
SH3BP2-214ENST00000509677 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
SH3BP2-214ENST00000509677 TMC1Q8TDI8 760 aa25.51■■□□□ 1.67
SH3BP2-214ENST00000509677 PLEKHG5O94827 1062 aa25.5■■□□□ 1.67
SH3BP2-214ENST00000509677 PUS7Q96PZ0 661 aaKnown RBP25.48■■□□□ 1.67
SH3BP2-214ENST00000509677 TRPC5Q9UL62 973 aaPredicted RBP25.48■■□□□ 1.67
SH3BP2-214ENST00000509677 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.48■■□□□ 1.67
SH3BP2-214ENST00000509677 ARHGEF10O15013 1369 aa25.46■■□□□ 1.67
SH3BP2-214ENST00000509677 SLC12A5Q9H2X9 1139 aa25.46■■□□□ 1.67
SH3BP2-214ENST00000509677 ABCA3Q99758 1704 aa25.44■■□□□ 1.66
SH3BP2-214ENST00000509677 FNBP4Q8N3X1 1017 aaPredicted RBP25.44■■□□□ 1.66
SH3BP2-214ENST00000509677 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
SH3BP2-214ENST00000509677 CABLES1Q8TDN4 633 aa25.43■■□□□ 1.66
SH3BP2-214ENST00000509677 ATRNO75882 1429 aa25.43■■□□□ 1.66
SH3BP2-214ENST00000509677 ZNF692Q9BU19 519 aaPredicted RBP25.42■■□□□ 1.66
SH3BP2-214ENST00000509677 TRPM3Q9HCF6 1732 aaPredicted RBP25.42■■□□□ 1.66
SH3BP2-214ENST00000509677 USP6P35125 1406 aa25.41■■□□□ 1.66
SH3BP2-214ENST00000509677 HAP1P54257 671 aaPredicted RBP25.41■■□□□ 1.66
SH3BP2-214ENST00000509677 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
SH3BP2-214ENST00000509677 BRWD3Q6RI45 1802 aa25.4■■□□□ 1.66
SH3BP2-214ENST00000509677 HDGFL2Q7Z4V5 671 aaPredicted RBP25.39■■□□□ 1.66
SH3BP2-214ENST00000509677 ABTB2Q8N961 1025 aa25.39■■□□□ 1.66
SH3BP2-214ENST00000509677 POLR3GLQ9BT43 218 aa25.39■■□□□ 1.66
SH3BP2-214ENST00000509677 KTN1Q86UP2 1357 aaKnown RBP25.39■■□□□ 1.65
SH3BP2-214ENST00000509677 PLCH1Q4KWH8 1693 aa25.39■■□□□ 1.65
SH3BP2-214ENST00000509677 CPSF1Q10570 1443 aaKnown RBP25.38■■□□□ 1.65
SH3BP2-214ENST00000509677 TERF2IPQ9NYB0 399 aa25.38■■□□□ 1.65
SH3BP2-214ENST00000509677 BRD4O60885 1362 aaPredicted RBP25.37■■□□□ 1.65
SH3BP2-214ENST00000509677 BCL9LQ86UU0 1499 aa25.36■■□□□ 1.65
SH3BP2-214ENST00000509677 NINLQ9Y2I6 1382 aa25.36■■□□□ 1.65
SH3BP2-214ENST00000509677 TTC21BQ7Z4L5 1316 aa25.36■■□□□ 1.65
SH3BP2-214ENST00000509677 ALS2Q96Q42 1657 aa25.36■■□□□ 1.65
SH3BP2-214ENST00000509677 SSH2Q76I76 1423 aa25.35■■□□□ 1.65
SH3BP2-214ENST00000509677 CD163L1Q9NR16 1453 aa25.34■■□□□ 1.65
SH3BP2-214ENST00000509677 SRCAPQ6ZRS2 3230 aa25.33■■□□□ 1.65
SH3BP2-214ENST00000509677 A0A1W2PP64 1363 aa25.33■■□□□ 1.65
SH3BP2-214ENST00000509677 GLI3P10071 1580 aa25.33■■□□□ 1.65
SH3BP2-214ENST00000509677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.32■■□□□ 1.64
SH3BP2-214ENST00000509677 NLRP6P59044 892 aa25.31■■□□□ 1.64
SH3BP2-214ENST00000509677 NLRP13Q86W25 1043 aa25.31■■□□□ 1.64
SH3BP2-214ENST00000509677 GJD4Q96KN9 370 aaPredicted RBP25.31■■□□□ 1.64
SH3BP2-214ENST00000509677 NWD2Q9ULI1 1742 aa25.31■■□□□ 1.64
SH3BP2-214ENST00000509677 TTC21AQ8NDW8 1320 aa25.3■■□□□ 1.64
SH3BP2-214ENST00000509677 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
SH3BP2-214ENST00000509677 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
SH3BP2-214ENST00000509677 ANKRD36BQ8N2N9 1353 aa25.28■■□□□ 1.64
SH3BP2-214ENST00000509677 EDC4Q6P2E9 1401 aaKnown RBP25.27■■□□□ 1.64
SH3BP2-214ENST00000509677 SLIT2O94813 1529 aa25.27■■□□□ 1.64
SH3BP2-214ENST00000509677 NME9Q86XW9 330 aa25.25■■□□□ 1.63
SH3BP2-214ENST00000509677 UNC5CLQ8IV45 518 aa25.25■■□□□ 1.63
SH3BP2-214ENST00000509677 ZRANB1Q9UGI0 708 aa25.25■■□□□ 1.63
SH3BP2-214ENST00000509677 USP19O94966 1318 aa25.25■■□□□ 1.63
SH3BP2-214ENST00000509677 MON2Q7Z3U7 1717 aa25.24■■□□□ 1.63
SH3BP2-214ENST00000509677 ZC3H6P61129 1189 aaKnown RBP25.24■■□□□ 1.63
SH3BP2-214ENST00000509677 NRAPQ86VF7 1730 aa25.23■■□□□ 1.63
SH3BP2-214ENST00000509677 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
SH3BP2-214ENST00000509677 GCP02774 474 aa25.23■■□□□ 1.63
SH3BP2-214ENST00000509677 NRKQ7Z2Y5 1582 aa25.22■■□□□ 1.63
SH3BP2-214ENST00000509677 CCDC125Q86Z20 511 aa25.22■■□□□ 1.63
SH3BP2-214ENST00000509677 PIK3C2AO00443 1686 aa25.22■■□□□ 1.63
SH3BP2-214ENST00000509677 PRDM11Q9NQV5 511 aa25.21■■□□□ 1.63
SH3BP2-214ENST00000509677 KIAA0232Q92628 1395 aa25.2■■□□□ 1.63
SH3BP2-214ENST00000509677 KIF7Q2M1P5 1343 aa25.2■■□□□ 1.62
SH3BP2-214ENST00000509677 SOX12O15370 315 aa25.2■■□□□ 1.62
SH3BP2-214ENST00000509677 CRYBG1Q9Y4K1 1723 aa25.2■■□□□ 1.62
SH3BP2-214ENST00000509677 ZEB1P37275 1124 aaPredicted RBP25.19■■□□□ 1.62
SH3BP2-214ENST00000509677 CHRNA2Q15822 529 aa25.18■■□□□ 1.62
SH3BP2-214ENST00000509677 CARD14Q9BXL6 1004 aa25.18■■□□□ 1.62
SH3BP2-214ENST00000509677 MYOM1P52179 1685 aa25.17■■□□□ 1.62
SH3BP2-214ENST00000509677 PHRF1Q9P1Y6 1649 aaKnown RBP25.17■■□□□ 1.62
SH3BP2-214ENST00000509677 ZBTB7CA1YPR0 619 aa25.17■■□□□ 1.62
SH3BP2-214ENST00000509677 CCDC9Q9Y3X0 531 aaKnown RBP25.17■■□□□ 1.62
SH3BP2-214ENST00000509677 USP31Q70CQ4 1352 aa25.17■■□□□ 1.62
SH3BP2-214ENST00000509677 KCNH5Q8NCM2 988 aa25.15■■□□□ 1.62
SH3BP2-214ENST00000509677 PANK3Q9H999 370 aa25.15■■□□□ 1.62
SH3BP2-214ENST00000509677 BTG4Q9NY30 223 aa25.15■■□□□ 1.62
SH3BP2-214ENST00000509677 NSD3Q9BZ95 1437 aa25.14■■□□□ 1.62
SH3BP2-214ENST00000509677 SLIT3O75094 1523 aa25.14■■□□□ 1.62
SH3BP2-214ENST00000509677 COL14A1Q05707 1796 aaKnown RBP25.13■■□□□ 1.61
SH3BP2-214ENST00000509677 FYB1O15117 783 aa25.12■■□□□ 1.61
SH3BP2-214ENST00000509677 SEPT12Q8IYM1 358 aa25.12■■□□□ 1.61
SH3BP2-214ENST00000509677 COG3Q96JB2 828 aa25.12■■□□□ 1.61
SH3BP2-214ENST00000509677 GGNBP2Q9H3C7 697 aa25.12■■□□□ 1.61
SH3BP2-214ENST00000509677 CPDO75976 1380 aa25.12■■□□□ 1.61
SH3BP2-214ENST00000509677 CCDC7Q96M83 1385 aa25.11■■□□□ 1.61
SH3BP2-214ENST00000509677 VPS72Q15906 364 aa25.11■■□□□ 1.61
SH3BP2-214ENST00000509677 BLMP54132 1417 aaPredicted RBP25.11■■□□□ 1.61
SH3BP2-214ENST00000509677 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
SH3BP2-214ENST00000509677 OVOS2A0A0J9YW53 1432 aa25.1■■□□□ 1.61
SH3BP2-214ENST00000509677 OVOS2Q6IE36 1432 aa25.1■■□□□ 1.61
SH3BP2-214ENST00000509677 SF3B2Q13435 895 aaKnown RBP25.09■■□□□ 1.61
SH3BP2-214ENST00000509677 DEFB132Q7Z7B7 95 aa25.08■■□□□ 1.61
SH3BP2-214ENST00000509677 ARHGEF25Q86VW2 580 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms