RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 LINC01559Q495D7 138 aa6.25□□□□□ -1.41
GYPA-206ENST00000509346 PRPF38BQ5VTL8 546 aaKnown RBP6.25□□□□□ -1.41
GYPA-206ENST00000509346 CABLES1Q8TDN4 633 aa6.25□□□□□ -1.41
GYPA-206ENST00000509346 KLF16Q9BXK1 252 aaPredicted RBP6.25□□□□□ -1.41
GYPA-206ENST00000509346 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
GYPA-206ENST00000509346 PER1O15534 1290 aaPredicted RBP6.24□□□□□ -1.41
GYPA-206ENST00000509346 BMP1P13497 986 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 PDE4DQ08499 809 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 DIXDC1Q155Q3 683 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 TUSC1Q2TAM9 212 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 MYSM1Q5VVJ2 828 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 RIC3Q7Z5B4 369 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 SENP2Q9HC62 589 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 MAP10Q9P2G4 905 aa6.24□□□□□ -1.41
GYPA-206ENST00000509346 TERTO14746 1132 aaKnown RBP6.23□□□□□ -1.41
GYPA-206ENST00000509346 VARSP26640 1264 aaKnown RBP6.23□□□□□ -1.41
GYPA-206ENST00000509346 QPCTQ16769 361 aa6.23□□□□□ -1.41
GYPA-206ENST00000509346 C4orf48Q5BLP8 95 aa6.23□□□□□ -1.41
GYPA-206ENST00000509346 ZBTB3Q9H5J0 574 aa6.23□□□□□ -1.41
GYPA-206ENST00000509346 LILRB3O75022 631 aa6.22□□□□□ -1.41
GYPA-206ENST00000509346 KIFC2Q96AC6 838 aa6.22□□□□□ -1.41
GYPA-206ENST00000509346 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
GYPA-206ENST00000509346 CAPN5O15484 640 aaPredicted RBP6.21□□□□□ -1.42
GYPA-206ENST00000509346 FOXJ1Q92949 421 aa6.21□□□□□ -1.42
GYPA-206ENST00000509346 TIMP2P16035 220 aa6.2□□□□□ -1.42
GYPA-206ENST00000509346 NNTQ13423 1086 aa6.2□□□□□ -1.42
GYPA-206ENST00000509346 SLC24A3Q9HC58 644 aa6.2□□□□□ -1.42
GYPA-206ENST00000509346 WASF2Q9Y6W5 498 aa6.2□□□□□ -1.42
GYPA-206ENST00000509346 ADH1CP00326 375 aa6.19□□□□□ -1.42
GYPA-206ENST00000509346 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
GYPA-206ENST00000509346 GRM5P41594 1212 aa6.19□□□□□ -1.42
GYPA-206ENST00000509346 FBXO31Q5XUX0 539 aaPredicted RBP6.19□□□□□ -1.42
GYPA-206ENST00000509346 SH3RF1Q7Z6J0 888 aa6.19□□□□□ -1.42
GYPA-206ENST00000509346 C1QTNF2Q9BXJ5 285 aa6.19□□□□□ -1.42
GYPA-206ENST00000509346 NR3C2P08235 984 aa6.18□□□□□ -1.42
GYPA-206ENST00000509346 CTHP32929 405 aa6.18□□□□□ -1.42
GYPA-206ENST00000509346 RTL5Q5HYW3 569 aaPredicted RBP6.18□□□□□ -1.42
GYPA-206ENST00000509346 ZFP42Q96MM3 310 aa6.18□□□□□ -1.42
GYPA-206ENST00000509346 PLEKHG3A1L390 1219 aa6.17□□□□□ -1.42
GYPA-206ENST00000509346 CSPP1Q1MSJ5 1256 aa6.17□□□□□ -1.42
GYPA-206ENST00000509346 SH3BP5LQ7L8J4 393 aa6.16□□□□□ -1.42
GYPA-206ENST00000509346 FAM174AQ8TBP5 190 aa6.16□□□□□ -1.42
GYPA-206ENST00000509346 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
GYPA-206ENST00000509346 H3BM21 787 aa6.15□□□□□ -1.42
GYPA-206ENST00000509346 CLK2P49760 499 aaKnown RBP6.15□□□□□ -1.42
GYPA-206ENST00000509346 MRPL14Q6P1L8 145 aaKnown RBP6.15□□□□□ -1.42
GYPA-206ENST00000509346 NPAS3Q8IXF0 933 aa6.15□□□□□ -1.42
GYPA-206ENST00000509346 PRKCSHP14314 528 aaPredicted RBP6.14□□□□□ -1.43
GYPA-206ENST00000509346 WDR4P57081 412 aaKnown RBP6.14□□□□□ -1.43
GYPA-206ENST00000509346 TRMT44Q8IYL2 757 aaKnown RBP6.14□□□□□ -1.43
GYPA-206ENST00000509346 ITPKCQ96DU7 683 aa6.14□□□□□ -1.43
GYPA-206ENST00000509346 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
GYPA-206ENST00000509346 ERBB4Q15303 1308 aa6.14□□□□□ -1.43
GYPA-206ENST00000509346 NR5A1Q13285 461 aa6.13□□□□□ -1.43
GYPA-206ENST00000509346 BPHLQ86WA6 291 aaPredicted RBP6.13□□□□□ -1.43
GYPA-206ENST00000509346 STK17AQ9UEE5 414 aa6.13□□□□□ -1.43
GYPA-206ENST00000509346 MAP4K5Q9Y4K4 846 aa6.13□□□□□ -1.43
GYPA-206ENST00000509346 PURBQ96QR8 312 aaKnown RBP6.12□□□□□ -1.43
GYPA-206ENST00000509346 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.12□□□□□ -1.43
GYPA-206ENST00000509346 NUTM2BA6NNL0 878 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 SOBPA7XYQ1 873 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 NUTM2EB1AL46 878 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 ZIC2O95409 532 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 GMPRP36959 345 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 VEGFBP49765 207 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 INSM1Q01101 510 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 TPRNQ4KMQ1 711 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 NUTM2DQ5VT03 806 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 NUTM2AQ8IVF1 878 aaPredicted RBP6.11□□□□□ -1.43
GYPA-206ENST00000509346 OCSTAMPQ9BR26 566 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 POLR3EQ9NVU0 708 aa6.11□□□□□ -1.43
GYPA-206ENST00000509346 VSIG8P0DPA2 414 aa6.1□□□□□ -1.43
GYPA-206ENST00000509346 MEIOBQ8N635 442 aa6.1□□□□□ -1.43
GYPA-206ENST00000509346 ARMC2Q8NEN0 867 aa6.1□□□□□ -1.43
GYPA-206ENST00000509346 HELBQ8NG08 1087 aaPredicted RBP6.1□□□□□ -1.43
GYPA-206ENST00000509346 TSC1Q92574 1164 aa6.1□□□□□ -1.43
GYPA-206ENST00000509346 RSPH6AQ9H0K4 717 aa6.1□□□□□ -1.43
GYPA-206ENST00000509346 ARID5BQ14865 1188 aa6.09□□□□□ -1.43
GYPA-206ENST00000509346 ERFEQ4G0M1 354 aa6.09□□□□□ -1.43
GYPA-206ENST00000509346 NBPF14Q5TI25 921 aa6.09□□□□□ -1.43
GYPA-206ENST00000509346 PPP2R2DQ66LE6 453 aa6.09□□□□□ -1.43
GYPA-206ENST00000509346 LRRN4Q8WUT4 740 aa6.09□□□□□ -1.43
GYPA-206ENST00000509346 GPBP1L1Q9HC44 474 aaPredicted RBP6.09□□□□□ -1.43
GYPA-206ENST00000509346 FSHRP23945 695 aa6.08□□□□□ -1.44
GYPA-206ENST00000509346 SKIV2LQ15477 1246 aaKnown RBP6.08□□□□□ -1.44
GYPA-206ENST00000509346 SH3D19Q5HYK7 790 aa6.08□□□□□ -1.44
GYPA-206ENST00000509346 PROCA1Q8NCQ7 364 aaPredicted RBP6.08□□□□□ -1.44
GYPA-206ENST00000509346 SLC16A10Q8TF71 515 aa6.08□□□□□ -1.44
GYPA-206ENST00000509346 GPKOWQ92917 476 aaPredicted RBP eCLIP6.08□□□□□ -1.44
GYPA-206ENST00000509346 IRF7Q92985 503 aa6.08□□□□□ -1.44
GYPA-206ENST00000509346 FAM117AQ9C073 453 aa6.08□□□□□ -1.44
GYPA-206ENST00000509346 SOS2Q07890 1332 aaPredicted RBP6.07□□□□□ -1.44
GYPA-206ENST00000509346 SCARF1Q14162 830 aa6.07□□□□□ -1.44
GYPA-206ENST00000509346 AGERQ15109 404 aa6.07□□□□□ -1.44
GYPA-206ENST00000509346 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
GYPA-206ENST00000509346 KDM4CQ9H3R0 1056 aa6.07□□□□□ -1.44
GYPA-206ENST00000509346 PDXDC2PQ6P474 469 aa6.06□□□□□ -1.44
GYPA-206ENST00000509346 FKBPLQ9UIM3 349 aa6.06□□□□□ -1.44
GYPA-206ENST00000509346 DNMT3LQ9UJW3 386 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms