RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
CCSER1-208ENST00000509109 RTEL1-TNFRSF6BF6WH68 1400 aa11.75□□□□□ -0.53
CCSER1-208ENST00000509109 MBD5Q9P267 1494 aa11.75□□□□□ -0.53
CCSER1-208ENST00000509109 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
CCSER1-208ENST00000509109 FAM98CQ17RN3 349 aaKnown RBP11.74□□□□□ -0.53
CCSER1-208ENST00000509109 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
CCSER1-208ENST00000509109 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
CCSER1-208ENST00000509109 NUTM2FA1L443 756 aa11.73□□□□□ -0.53
CCSER1-208ENST00000509109 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
CCSER1-208ENST00000509109 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
CCSER1-208ENST00000509109 LRRC9Q6ZRR7 1453 aa11.73□□□□□ -0.53
CCSER1-208ENST00000509109 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
CCSER1-208ENST00000509109 PNMA3Q9UL41 463 aa11.73□□□□□ -0.53
CCSER1-208ENST00000509109 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
CCSER1-208ENST00000509109 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
CCSER1-208ENST00000509109 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
CCSER1-208ENST00000509109 TATDN2Q93075 761 aa11.71□□□□□ -0.53
CCSER1-208ENST00000509109 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.53
CCSER1-208ENST00000509109 NUDT18Q6ZVK8 323 aa11.7□□□□□ -0.54
CCSER1-208ENST00000509109 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
CCSER1-208ENST00000509109 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
CCSER1-208ENST00000509109 SOWAHBA6NEL2 793 aa11.69□□□□□ -0.54
CCSER1-208ENST00000509109 NBPF26B4DH59 902 aa11.69□□□□□ -0.54
CCSER1-208ENST00000509109 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
CCSER1-208ENST00000509109 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
CCSER1-208ENST00000509109 MAST1Q9Y2H9 1570 aa11.68□□□□□ -0.54
CCSER1-208ENST00000509109 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
CCSER1-208ENST00000509109 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
CCSER1-208ENST00000509109 RBM27Q9P2N5 1060 aaKnown RBP11.68□□□□□ -0.54
CCSER1-208ENST00000509109 PTPRTO14522 1441 aa11.68□□□□□ -0.54
CCSER1-208ENST00000509109 NCOA1Q15788 1441 aa11.68□□□□□ -0.54
CCSER1-208ENST00000509109 MIA2Q96PC5 1412 aa11.68□□□□□ -0.54
CCSER1-208ENST00000509109 PTGDRQ13258 359 aa11.67□□□□□ -0.54
CCSER1-208ENST00000509109 GGT6Q6P531 493 aa11.67□□□□□ -0.54
CCSER1-208ENST00000509109 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
CCSER1-208ENST00000509109 ZC3H13Q5T200 1668 aaKnown RBP11.67□□□□□ -0.54
CCSER1-208ENST00000509109 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
CCSER1-208ENST00000509109 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
CCSER1-208ENST00000509109 EIF2AK4Q9P2K8 1649 aaKnown RBP11.67□□□□□ -0.54
CCSER1-208ENST00000509109 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 TSPY4P0CV99 314 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 TSPY10P0CW01 314 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 LRCH3Q96II8 777 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 PTPRKQ15262 1439 aa11.66□□□□□ -0.54
CCSER1-208ENST00000509109 PLA2R1Q13018 1463 aa11.65□□□□□ -0.54
CCSER1-208ENST00000509109 RNF17Q9BXT8 1623 aaKnown RBP11.65□□□□□ -0.54
CCSER1-208ENST00000509109 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
CCSER1-208ENST00000509109 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
CCSER1-208ENST00000509109 CROCC2H7BZ55 1655 aa11.65□□□□□ -0.55
CCSER1-208ENST00000509109 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
CCSER1-208ENST00000509109 PZPP20742 1482 aa11.63□□□□□ -0.55
CCSER1-208ENST00000509109 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
CCSER1-208ENST00000509109 KIF3BO15066 747 aa11.62□□□□□ -0.55
CCSER1-208ENST00000509109 POLR1AO95602 1720 aaPredicted RBP11.62□□□□□ -0.55
CCSER1-208ENST00000509109 A2ML1A8K2U0 1454 aa11.62□□□□□ -0.55
CCSER1-208ENST00000509109 SHANK2Q9UPX8 1470 aa11.62□□□□□ -0.55
CCSER1-208ENST00000509109 PTPN23Q9H3S7 1636 aa11.61□□□□□ -0.55
CCSER1-208ENST00000509109 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
CCSER1-208ENST00000509109 IQSEC2Q5JU85 1478 aa11.61□□□□□ -0.55
CCSER1-208ENST00000509109 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
CCSER1-208ENST00000509109 DUOX2Q9NRD8 1548 aa11.6□□□□□ -0.55
CCSER1-208ENST00000509109 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
CCSER1-208ENST00000509109 RNF40O75150 1001 aa11.6□□□□□ -0.55
CCSER1-208ENST00000509109 FCHSD2O94868 740 aa11.6□□□□□ -0.55
CCSER1-208ENST00000509109 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
CCSER1-208ENST00000509109 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
CCSER1-208ENST00000509109 NLRP1Q9C000 1473 aa11.59□□□□□ -0.55
CCSER1-208ENST00000509109 TNRQ92752 1358 aa11.59□□□□□ -0.55
CCSER1-208ENST00000509109 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
CCSER1-208ENST00000509109 ABCC3O15438 1527 aa11.58□□□□□ -0.56
CCSER1-208ENST00000509109 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
CCSER1-208ENST00000509109 PRDM15P57071 1507 aaPredicted RBP11.57□□□□□ -0.56
CCSER1-208ENST00000509109 PPP4CP60510 307 aa11.57□□□□□ -0.56
CCSER1-208ENST00000509109 EYA1Q99502 592 aa11.57□□□□□ -0.56
CCSER1-208ENST00000509109 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
CCSER1-208ENST00000509109 CEP152O94986 1710 aa11.56□□□□□ -0.56
CCSER1-208ENST00000509109 HDGFP51858 240 aaKnown RBP11.56□□□□□ -0.56
CCSER1-208ENST00000509109 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
CCSER1-208ENST00000509109 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
CCSER1-208ENST00000509109 MROH1Q8NDA8 1641 aa11.56□□□□□ -0.56
CCSER1-208ENST00000509109 SPATA31D1Q6ZQQ2 1576 aa11.55□□□□□ -0.56
CCSER1-208ENST00000509109 ADGRG1Q9Y653 693 aa11.55□□□□□ -0.56
CCSER1-208ENST00000509109 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CCSER1-208ENST00000509109 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
CCSER1-208ENST00000509109 DEPDC5O75140 1603 aa11.54□□□□□ -0.56
CCSER1-208ENST00000509109 DAPK1P53355 1430 aa11.53□□□□□ -0.56
CCSER1-208ENST00000509109 FECHP22830 423 aa11.53□□□□□ -0.56
CCSER1-208ENST00000509109 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
CCSER1-208ENST00000509109 ABCC5O15440 1437 aa11.52□□□□□ -0.56
CCSER1-208ENST00000509109 ERVK-7P63135 1459 aa11.52□□□□□ -0.56
CCSER1-208ENST00000509109 HIC1Q14526 733 aa11.52□□□□□ -0.57
CCSER1-208ENST00000509109 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
CCSER1-208ENST00000509109 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.57
CCSER1-208ENST00000509109 GPR37O15354 613 aa11.51□□□□□ -0.57
CCSER1-208ENST00000509109 SLC24A1O60721 1099 aa11.51□□□□□ -0.57
CCSER1-208ENST00000509109 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
CCSER1-208ENST00000509109 THEMISQ8N1K5 641 aaPredicted RBP11.51□□□□□ -0.57
CCSER1-208ENST00000509109 KANK1Q14678 1352 aa11.51□□□□□ -0.57
CCSER1-208ENST00000509109 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms