RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FBXO31Q5XUX0 539 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P44-201ENST00000508597 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P44-201ENST00000508597 NR1I2O75469 434 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 IFFO2Q5TF58 517 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 CYB5RLQ6IPT4 315 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 BRICD5Q6PL45 260 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 UACAQ9BZF9 1416 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 UHRF1BP1LA0JNW5 1464 aa8.69□□□□□ -1.02
HMGB1P44-201ENST00000508597 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
HMGB1P44-201ENST00000508597 USP46P62068 366 aa8.68□□□□□ -1.02
HMGB1P44-201ENST00000508597 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
HMGB1P44-201ENST00000508597 PPEF1O14829 653 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 FDX1P10109 184 aa8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 FHOD3Q2V2M9 1422 aa8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 RSBN1LQ6PCB5 846 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P44-201ENST00000508597 ABCA8O94911 1581 aa8.66□□□□□ -1.02
HMGB1P44-201ENST00000508597 SPTLC1O15269 473 aa8.66□□□□□ -1.02
HMGB1P44-201ENST00000508597 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
HMGB1P44-201ENST00000508597 SPSB2Q99619 263 aa8.66□□□□□ -1.02
HMGB1P44-201ENST00000508597 PRDM9Q9NQV7 894 aa8.66□□□□□ -1.02
HMGB1P44-201ENST00000508597 ABCC2Q92887 1545 aa8.65□□□□□ -1.02
HMGB1P44-201ENST00000508597 A0A0G2JS52 829 aa8.65□□□□□ -1.02
HMGB1P44-201ENST00000508597 S1PR4O95977 384 aa8.65□□□□□ -1.02
HMGB1P44-201ENST00000508597 CSPP1Q1MSJ5 1256 aa8.65□□□□□ -1.02
HMGB1P44-201ENST00000508597 RAPGEF6Q8TEU7 1601 aa8.65□□□□□ -1.03
HMGB1P44-201ENST00000508597 QPCTQ16769 361 aa8.64□□□□□ -1.03
HMGB1P44-201ENST00000508597 GRIPAP1Q4V328 841 aa8.64□□□□□ -1.03
HMGB1P44-201ENST00000508597 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
HMGB1P44-201ENST00000508597 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 ADH1BP00325 375 aa8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 PLB1Q6P1J6 1458 aa8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
HMGB1P44-201ENST00000508597 ADCY10Q96PN6 1610 aa8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 EMID1Q96A84 441 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 KDM5BQ9UGL1 1544 aa8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 VPS8Q8N3P4 1428 aa8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 HECW1Q76N89 1606 aa8.62□□□□□ -1.03
HMGB1P44-201ENST00000508597 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
HMGB1P44-201ENST00000508597 HRCP23327 699 aa8.61□□□□□ -1.03
HMGB1P44-201ENST00000508597 SLC6A16Q9GZN6 736 aa8.61□□□□□ -1.03
HMGB1P44-201ENST00000508597 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
HMGB1P44-201ENST00000508597 FYCO1Q9BQS8 1478 aa8.61□□□□□ -1.03
HMGB1P44-201ENST00000508597 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
HMGB1P44-201ENST00000508597 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P44-201ENST00000508597 PLA2G2CQ5R387 149 aa8.6□□□□□ -1.03
HMGB1P44-201ENST00000508597 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
HMGB1P44-201ENST00000508597 CDK11AQ9UQ88 783 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P44-201ENST00000508597 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 NUP153P49790 1475 aaKnown RBP8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 CCDC18Q5T9S5 1454 aa8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 Q3C1V9 767 aa8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
HMGB1P44-201ENST00000508597 ATP10BO94823 1461 aa8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 CFAP99D6REC4 459 aa8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 LILRB3O75022 631 aa8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 GJA5P36382 358 aa8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 DIXDC1Q155Q3 683 aa8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 EPRSP07814 1512 aaKnown RBP8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
HMGB1P44-201ENST00000508597 PCF11O94913 1555 aaKnown RBP8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 PLEKHD1A6NEE1 506 aa8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 MAP3K1Q13233 1512 aa8.57□□□□□ -1.04
HMGB1P44-201ENST00000508597 MTMR2Q13614 643 aa8.56□□□□□ -1.04
HMGB1P44-201ENST00000508597 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
HMGB1P44-201ENST00000508597 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
HMGB1P44-201ENST00000508597 ATP1B4Q9UN42 357 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P44-201ENST00000508597 GTF3C3Q9Y5Q9 886 aa8.56□□□□□ -1.04
HMGB1P44-201ENST00000508597 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
HMGB1P44-201ENST00000508597 MMP16P51512 607 aa8.55□□□□□ -1.04
HMGB1P44-201ENST00000508597 ASXL2Q76L83 1435 aa8.54□□□□□ -1.04
HMGB1P44-201ENST00000508597 WDR7Q9Y4E6 1490 aa8.54□□□□□ -1.04
HMGB1P44-201ENST00000508597 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
HMGB1P44-201ENST00000508597 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
HMGB1P44-201ENST00000508597 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
HMGB1P44-201ENST00000508597 PER1O15534 1290 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P44-201ENST00000508597 ZBTB3Q9H5J0 574 aa8.53□□□□□ -1.04
HMGB1P44-201ENST00000508597 ABCC10Q5T3U5 1492 aa8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 LRRIQ1Q96JM4 1722 aa8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 JUNDP17535 347 aa8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 NUTM2DQ5VT03 806 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 PRPF38BQ5VTL8 546 aaKnown RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 PTCRAQ6ISU1 281 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 TROQ12816 1431 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 GLI2P10070 1586 aa8.52□□□□□ -1.05
HMGB1P44-201ENST00000508597 CDK13Q14004 1512 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms