RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 USP6P35125 1406 aa15.01□□□□□ -0.01
BRCC3P1-201ENST00000508559 TTC21BQ7Z4L5 1316 aa15.01□□□□□ -0.01
BRCC3P1-201ENST00000508559 CD163L1Q9NR16 1453 aa15.01□□□□□ -0.01
BRCC3P1-201ENST00000508559 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
BRCC3P1-201ENST00000508559 DDX17Q92841 729 aaKnown RBP15□□□□□ -0.01
BRCC3P1-201ENST00000508559 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
BRCC3P1-201ENST00000508559 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
BRCC3P1-201ENST00000508559 MORC1Q86VD1 984 aa14.99□□□□□ -0.01
BRCC3P1-201ENST00000508559 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
BRCC3P1-201ENST00000508559 COG3Q96JB2 828 aa14.98□□□□□ -0.01
BRCC3P1-201ENST00000508559 GGNBP2Q9H3C7 697 aa14.98□□□□□ -0.01
BRCC3P1-201ENST00000508559 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
BRCC3P1-201ENST00000508559 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
BRCC3P1-201ENST00000508559 NME9Q86XW9 330 aa14.97□□□□□ -0.01
BRCC3P1-201ENST00000508559 AKAP12Q02952 1782 aa14.97□□□□□ -0.01
BRCC3P1-201ENST00000508559 NSD2O96028 1365 aa14.97□□□□□ -0.01
BRCC3P1-201ENST00000508559 FYB1O15117 783 aa14.96□□□□□ -0.01
BRCC3P1-201ENST00000508559 NLRP6P59044 892 aa14.96□□□□□ -0.01
BRCC3P1-201ENST00000508559 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
BRCC3P1-201ENST00000508559 MON2Q7Z3U7 1717 aa14.95□□□□□ -0.02
BRCC3P1-201ENST00000508559 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
BRCC3P1-201ENST00000508559 RALBP1Q15311 655 aa14.95□□□□□ -0.02
BRCC3P1-201ENST00000508559 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
BRCC3P1-201ENST00000508559 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
BRCC3P1-201ENST00000508559 NLRP13Q86W25 1043 aa14.94□□□□□ -0.02
BRCC3P1-201ENST00000508559 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
BRCC3P1-201ENST00000508559 HAP1P54257 671 aaPredicted RBP14.93□□□□□ -0.02
BRCC3P1-201ENST00000508559 LRRC59Q96AG4 307 aaKnown RBP14.93□□□□□ -0.02
BRCC3P1-201ENST00000508559 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
BRCC3P1-201ENST00000508559 SOX12O15370 315 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 ZRANB1Q9UGI0 708 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
BRCC3P1-201ENST00000508559 PXDNQ92626 1479 aa14.91□□□□□ -0.02
BRCC3P1-201ENST00000508559 KIF20BQ96Q89 1820 aa14.9□□□□□ -0.02
BRCC3P1-201ENST00000508559 NRKQ7Z2Y5 1582 aa14.9□□□□□ -0.02
BRCC3P1-201ENST00000508559 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
BRCC3P1-201ENST00000508559 MYBBP1AQ9BQG0 1328 aaKnown RBP14.89□□□□□ -0.03
BRCC3P1-201ENST00000508559 NHSL1Q5SYE7 1610 aa14.88□□□□□ -0.03
BRCC3P1-201ENST00000508559 USP31Q70CQ4 1352 aa14.88□□□□□ -0.03
BRCC3P1-201ENST00000508559 MIER1Q8N108 512 aa14.88□□□□□ -0.03
BRCC3P1-201ENST00000508559 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
BRCC3P1-201ENST00000508559 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
BRCC3P1-201ENST00000508559 PARD3Q8TEW0 1356 aa14.87□□□□□ -0.03
BRCC3P1-201ENST00000508559 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
BRCC3P1-201ENST00000508559 PPM1GO15355 546 aaPredicted RBP14.87□□□□□ -0.03
BRCC3P1-201ENST00000508559 TRPM3Q9HCF6 1732 aaPredicted RBP14.86□□□□□ -0.03
BRCC3P1-201ENST00000508559 OVOS2A0A0J9YW53 1432 aa14.85□□□□□ -0.03
BRCC3P1-201ENST00000508559 OVOS2Q6IE36 1432 aa14.85□□□□□ -0.03
BRCC3P1-201ENST00000508559 PIK3C2AO00443 1686 aa14.85□□□□□ -0.03
BRCC3P1-201ENST00000508559 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
BRCC3P1-201ENST00000508559 CFAP53Q96M91 514 aa14.85□□□□□ -0.03
BRCC3P1-201ENST00000508559 GCP02774 474 aa14.84□□□□□ -0.03
BRCC3P1-201ENST00000508559 AMPHP49418 695 aa14.84□□□□□ -0.03
BRCC3P1-201ENST00000508559 CABLES1Q8TDN4 633 aa14.84□□□□□ -0.03
BRCC3P1-201ENST00000508559 HSPA1LP34931 641 aa14.83□□□□□ -0.04
BRCC3P1-201ENST00000508559 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
BRCC3P1-201ENST00000508559 ANKRD26Q9UPS8 1709 aa14.83□□□□□ -0.04
BRCC3P1-201ENST00000508559 ALS2Q96Q42 1657 aa14.82□□□□□ -0.04
BRCC3P1-201ENST00000508559 FBLN1P23142 703 aa14.82□□□□□ -0.04
BRCC3P1-201ENST00000508559 MTHFSP49914 203 aa14.82□□□□□ -0.04
BRCC3P1-201ENST00000508559 MRS2Q9HD23 443 aa14.82□□□□□ -0.04
BRCC3P1-201ENST00000508559 USP19O94966 1318 aa14.82□□□□□ -0.04
BRCC3P1-201ENST00000508559 NUTM2BA6NNL0 878 aaPredicted RBP14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 NUTM2EB1AL46 878 aaPredicted RBP14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 CCER2I3L3R5 266 aa14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 ZC3H6P61129 1189 aaKnown RBP14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 NUTM2AQ8IVF1 878 aaPredicted RBP14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 AATKQ6ZMQ8 1374 aa14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 PNPLA6Q8IY17 1366 aa14.81□□□□□ -0.04
BRCC3P1-201ENST00000508559 FBXO41Q8TF61 875 aa14.8□□□□□ -0.04
BRCC3P1-201ENST00000508559 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
BRCC3P1-201ENST00000508559 EMILIN1Q9Y6C2 1016 aa14.8□□□□□ -0.04
BRCC3P1-201ENST00000508559 JCADQ9P266 1359 aa14.8□□□□□ -0.04
BRCC3P1-201ENST00000508559 COL16A1Q07092 1604 aaPredicted RBP14.8□□□□□ -0.04
BRCC3P1-201ENST00000508559 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
BRCC3P1-201ENST00000508559 MAP3K19Q56UN5 1328 aa14.78□□□□□ -0.04
BRCC3P1-201ENST00000508559 SLIT3O75094 1523 aa14.77□□□□□ -0.04
BRCC3P1-201ENST00000508559 WDR43Q15061 677 aaKnown RBP eCLIP14.77□□□□□ -0.05
BRCC3P1-201ENST00000508559 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
BRCC3P1-201ENST00000508559 MED1Q15648 1581 aaPredicted RBP14.77□□□□□ -0.05
BRCC3P1-201ENST00000508559 ADAMTS2O95450 1211 aa14.76□□□□□ -0.05
BRCC3P1-201ENST00000508559 ARHGEF25Q86VW2 580 aa14.76□□□□□ -0.05
BRCC3P1-201ENST00000508559 USP54Q70EL1 1684 aa14.76□□□□□ -0.05
BRCC3P1-201ENST00000508559 FLT4P35916 1363 aa14.75□□□□□ -0.05
BRCC3P1-201ENST00000508559 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
BRCC3P1-201ENST00000508559 CHRNA2Q15822 529 aa14.75□□□□□ -0.05
BRCC3P1-201ENST00000508559 MEX3CQ5U5Q3 659 aaKnown RBP14.75□□□□□ -0.05
BRCC3P1-201ENST00000508559 KIAA0232Q92628 1395 aa14.74□□□□□ -0.05
BRCC3P1-201ENST00000508559 IP6K1Q92551 441 aa14.74□□□□□ -0.05
BRCC3P1-201ENST00000508559 LTV1Q96GA3 475 aaPredicted RBP14.74□□□□□ -0.05
BRCC3P1-201ENST00000508559 NFAT5O94916 1531 aa14.74□□□□□ -0.05
BRCC3P1-201ENST00000508559 PHRF1Q9P1Y6 1649 aaKnown RBP14.74□□□□□ -0.05
BRCC3P1-201ENST00000508559 RTL1A6NKG5 1358 aa14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 MAP2P11137 1827 aaKnown RBP14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms