RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PPIP5K1Q6PFW1 1433 aa12□□□□□ -0.49
USP46-207ENST00000508499 CERKQ8TCT0 537 aa12□□□□□ -0.49
USP46-207ENST00000508499 USP54Q70EL1 1684 aa11.99□□□□□ -0.49
USP46-207ENST00000508499 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
USP46-207ENST00000508499 CABP2Q9NPB3 220 aa11.99□□□□□ -0.49
USP46-207ENST00000508499 ANKRD36BQ8N2N9 1353 aa11.99□□□□□ -0.49
USP46-207ENST00000508499 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
USP46-207ENST00000508499 SLAIN2Q9P270 581 aa11.98□□□□□ -0.49
USP46-207ENST00000508499 TRPM3Q9HCF6 1732 aaPredicted RBP11.98□□□□□ -0.49
USP46-207ENST00000508499 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
USP46-207ENST00000508499 ZNF692Q9BU19 519 aaPredicted RBP11.97□□□□□ -0.49
USP46-207ENST00000508499 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
USP46-207ENST00000508499 TOM1O60784 492 aa11.96□□□□□ -0.49
USP46-207ENST00000508499 SSH2Q76I76 1423 aa11.96□□□□□ -0.49
USP46-207ENST00000508499 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
USP46-207ENST00000508499 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
USP46-207ENST00000508499 KIF20BQ96Q89 1820 aa11.95□□□□□ -0.5
USP46-207ENST00000508499 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 USP6P35125 1406 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
USP46-207ENST00000508499 A0A1W2PP64 1363 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 NPC1L1Q9UHC9 1359 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
USP46-207ENST00000508499 PXDNQ92626 1479 aa11.93□□□□□ -0.5
USP46-207ENST00000508499 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
USP46-207ENST00000508499 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
USP46-207ENST00000508499 LHX8Q68G74 356 aa11.93□□□□□ -0.5
USP46-207ENST00000508499 ACEP12821 1306 aa11.92□□□□□ -0.5
USP46-207ENST00000508499 NPHP3Q7Z494 1330 aa11.92□□□□□ -0.5
USP46-207ENST00000508499 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
USP46-207ENST00000508499 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
USP46-207ENST00000508499 ORAI2Q96SN7 254 aa11.92□□□□□ -0.5
USP46-207ENST00000508499 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
USP46-207ENST00000508499 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
USP46-207ENST00000508499 SOS2Q07890 1332 aaPredicted RBP11.91□□□□□ -0.5
USP46-207ENST00000508499 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
USP46-207ENST00000508499 NSD2O96028 1365 aa11.91□□□□□ -0.5
USP46-207ENST00000508499 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
USP46-207ENST00000508499 PHLPP1O60346 1717 aa11.9□□□□□ -0.5
USP46-207ENST00000508499 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
USP46-207ENST00000508499 MED1Q15648 1581 aaPredicted RBP11.9□□□□□ -0.5
USP46-207ENST00000508499 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
USP46-207ENST00000508499 NUTM2FA1L443 756 aa11.89□□□□□ -0.51
USP46-207ENST00000508499 TMC1Q8TDI8 760 aa11.89□□□□□ -0.51
USP46-207ENST00000508499 PANK3Q9H999 370 aa11.89□□□□□ -0.51
USP46-207ENST00000508499 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
USP46-207ENST00000508499 CARD14Q9BXL6 1004 aa11.88□□□□□ -0.51
USP46-207ENST00000508499 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
USP46-207ENST00000508499 SHPRHQ149N8 1683 aa11.88□□□□□ -0.51
USP46-207ENST00000508499 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
USP46-207ENST00000508499 PSME1Q06323 249 aa11.87□□□□□ -0.51
USP46-207ENST00000508499 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
USP46-207ENST00000508499 NSD3Q9BZ95 1437 aa11.87□□□□□ -0.51
USP46-207ENST00000508499 FOXO3O43524 673 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 GABBR2O75899 941 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 TNS3Q68CZ2 1445 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
USP46-207ENST00000508499 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 CGNL1Q0VF96 1302 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
USP46-207ENST00000508499 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
USP46-207ENST00000508499 AMER1Q5JTC6 1135 aaPredicted RBP11.86□□□□□ -0.51
USP46-207ENST00000508499 SLIT3O75094 1523 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 ARHGEF10O15013 1369 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 SPATA31A3Q5VYP0 1347 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 KRT28Q7Z3Y7 464 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 POLR3GLQ9BT43 218 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
USP46-207ENST00000508499 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
USP46-207ENST00000508499 FYB1O15117 783 aa11.83□□□□□ -0.52
USP46-207ENST00000508499 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
USP46-207ENST00000508499 USP19O94966 1318 aa11.82□□□□□ -0.52
USP46-207ENST00000508499 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
USP46-207ENST00000508499 ABCC6O95255 1503 aa11.82□□□□□ -0.52
USP46-207ENST00000508499 PARD3Q8TEW0 1356 aa11.81□□□□□ -0.52
USP46-207ENST00000508499 AATKQ6ZMQ8 1374 aa11.81□□□□□ -0.52
USP46-207ENST00000508499 NFAT5O94916 1531 aa11.8□□□□□ -0.52
USP46-207ENST00000508499 LTN1O94822 1766 aa11.8□□□□□ -0.52
USP46-207ENST00000508499 NLRP13Q86W25 1043 aa11.79□□□□□ -0.52
USP46-207ENST00000508499 FBXO41Q8TF61 875 aa11.79□□□□□ -0.52
USP46-207ENST00000508499 SMG6Q86US8 1419 aaKnown RBP11.79□□□□□ -0.52
USP46-207ENST00000508499 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
USP46-207ENST00000508499 PIP4K2BP78356 416 aa11.78□□□□□ -0.52
USP46-207ENST00000508499 RALBP1Q15311 655 aa11.78□□□□□ -0.52
USP46-207ENST00000508499 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
USP46-207ENST00000508499 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
USP46-207ENST00000508499 NME9Q86XW9 330 aa11.77□□□□□ -0.52
USP46-207ENST00000508499 DDX17Q92841 729 aaKnown RBP11.77□□□□□ -0.52
USP46-207ENST00000508499 COG3Q96JB2 828 aa11.77□□□□□ -0.52
USP46-207ENST00000508499 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms