RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
CLOCK-207ENST00000508049 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
CLOCK-207ENST00000508049 SPTLC1O15269 473 aa9.51□□□□□ -0.89
CLOCK-207ENST00000508049 WIPF1O43516 503 aa9.51□□□□□ -0.89
CLOCK-207ENST00000508049 AK7Q96M32 723 aa9.51□□□□□ -0.89
CLOCK-207ENST00000508049 HRCP23327 699 aa9.5□□□□□ -0.89
CLOCK-207ENST00000508049 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
CLOCK-207ENST00000508049 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
CLOCK-207ENST00000508049 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
CLOCK-207ENST00000508049 NNTQ13423 1086 aa9.49□□□□□ -0.89
CLOCK-207ENST00000508049 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
CLOCK-207ENST00000508049 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
CLOCK-207ENST00000508049 MPNDQ8N594 471 aa9.48□□□□□ -0.89
CLOCK-207ENST00000508049 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
CLOCK-207ENST00000508049 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
CLOCK-207ENST00000508049 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
CLOCK-207ENST00000508049 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
CLOCK-207ENST00000508049 NXF1Q9UBU9 619 aaKnown RBP9.47□□□□□ -0.89
CLOCK-207ENST00000508049 PRPF38BQ5VTL8 546 aaKnown RBP9.46□□□□□ -0.9
CLOCK-207ENST00000508049 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
CLOCK-207ENST00000508049 STK17AQ9UEE5 414 aa9.46□□□□□ -0.9
CLOCK-207ENST00000508049 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
CLOCK-207ENST00000508049 TSC1Q92574 1164 aa9.45□□□□□ -0.9
CLOCK-207ENST00000508049 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
CLOCK-207ENST00000508049 NUTM2BA6NNL0 878 aaPredicted RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 NUTM2EB1AL46 878 aaPredicted RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 WDR4P57081 412 aaKnown RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 AGERQ15109 404 aa9.44□□□□□ -0.9
CLOCK-207ENST00000508049 NUTM2DQ5VT03 806 aaPredicted RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
CLOCK-207ENST00000508049 ADH1CP00326 375 aa9.43□□□□□ -0.9
CLOCK-207ENST00000508049 PDE4DQ08499 809 aa9.43□□□□□ -0.9
CLOCK-207ENST00000508049 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
CLOCK-207ENST00000508049 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
CLOCK-207ENST00000508049 TIMP2P16035 220 aa9.42□□□□□ -0.9
CLOCK-207ENST00000508049 VEGFBP49765 207 aa9.42□□□□□ -0.9
CLOCK-207ENST00000508049 SCARF1Q14162 830 aa9.42□□□□□ -0.9
CLOCK-207ENST00000508049 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
CLOCK-207ENST00000508049 LIMD1Q9UGP4 676 aa9.42□□□□□ -0.9
CLOCK-207ENST00000508049 QPCTQ16769 361 aa9.41□□□□□ -0.9
CLOCK-207ENST00000508049 CDK15Q96Q40 435 aa9.41□□□□□ -0.9
CLOCK-207ENST00000508049 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
CLOCK-207ENST00000508049 NPAS3Q8IXF0 933 aa9.4□□□□□ -0.9
CLOCK-207ENST00000508049 IRF7Q92985 503 aa9.4□□□□□ -0.9
CLOCK-207ENST00000508049 GMPRP36959 345 aa9.39□□□□□ -0.91
CLOCK-207ENST00000508049 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
CLOCK-207ENST00000508049 KLF16Q9BXK1 252 aaPredicted RBP9.39□□□□□ -0.91
CLOCK-207ENST00000508049 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
CLOCK-207ENST00000508049 ZIC2O95409 532 aaPredicted RBP9.38□□□□□ -0.91
CLOCK-207ENST00000508049 C4orf48Q5BLP8 95 aa9.38□□□□□ -0.91
CLOCK-207ENST00000508049 H3BM21 787 aa9.37□□□□□ -0.91
CLOCK-207ENST00000508049 LILRB3O75022 631 aa9.37□□□□□ -0.91
CLOCK-207ENST00000508049 NR5A1Q13285 461 aa9.37□□□□□ -0.91
CLOCK-207ENST00000508049 TUSC1Q2TAM9 212 aa9.37□□□□□ -0.91
CLOCK-207ENST00000508049 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
CLOCK-207ENST00000508049 NR3C2P08235 984 aa9.36□□□□□ -0.91
CLOCK-207ENST00000508049 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
CLOCK-207ENST00000508049 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
CLOCK-207ENST00000508049 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
CLOCK-207ENST00000508049 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
CLOCK-207ENST00000508049 GRM5P41594 1212 aa9.35□□□□□ -0.91
CLOCK-207ENST00000508049 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
CLOCK-207ENST00000508049 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
CLOCK-207ENST00000508049 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
CLOCK-207ENST00000508049 CLK2P49760 499 aaKnown RBP9.33□□□□□ -0.92
CLOCK-207ENST00000508049 NBPF14Q5TI25 921 aa9.33□□□□□ -0.92
CLOCK-207ENST00000508049 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
CLOCK-207ENST00000508049 FAM181BA6NEQ2 426 aa9.32□□□□□ -0.92
CLOCK-207ENST00000508049 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
CLOCK-207ENST00000508049 MAGEB6P1A0A0J9YX57 407 aa9.31□□□□□ -0.92
CLOCK-207ENST00000508049 MAN1A2O60476 641 aa9.31□□□□□ -0.92
CLOCK-207ENST00000508049 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
CLOCK-207ENST00000508049 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
CLOCK-207ENST00000508049 UPP2O95045 317 aa9.3□□□□□ -0.92
CLOCK-207ENST00000508049 BMP2P12643 396 aa9.3□□□□□ -0.92
CLOCK-207ENST00000508049 FSHRP23945 695 aa9.3□□□□□ -0.92
CLOCK-207ENST00000508049 VASH1Q7L8A9 365 aaPredicted RBP9.3□□□□□ -0.92
CLOCK-207ENST00000508049 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
CLOCK-207ENST00000508049 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
CLOCK-207ENST00000508049 CARD14Q9BXL6 1004 aa9.29□□□□□ -0.92
CLOCK-207ENST00000508049 CTDSPL2Q05D32 466 aa9.28□□□□□ -0.92
CLOCK-207ENST00000508049 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
CLOCK-207ENST00000508049 MAP4K5Q9Y4K4 846 aa9.28□□□□□ -0.92
CLOCK-207ENST00000508049 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CLOCK-207ENST00000508049 TRMT44Q8IYL2 757 aaKnown RBP9.27□□□□□ -0.93
CLOCK-207ENST00000508049 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
CLOCK-207ENST00000508049 GPKOWQ92917 476 aaPredicted RBP eCLIP9.26□□□□□ -0.93
CLOCK-207ENST00000508049 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
CLOCK-207ENST00000508049 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
CLOCK-207ENST00000508049 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
CLOCK-207ENST00000508049 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
CLOCK-207ENST00000508049 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
CLOCK-207ENST00000508049 VSIG8P0DPA2 414 aa9.23□□□□□ -0.93
CLOCK-207ENST00000508049 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
CLOCK-207ENST00000508049 SOS2Q07890 1332 aaPredicted RBP9.23□□□□□ -0.93
CLOCK-207ENST00000508049 LRRN4Q8WUT4 740 aa9.22□□□□□ -0.93
CLOCK-207ENST00000508049 ARHGAP9Q9BRR9 750 aa9.22□□□□□ -0.93
CLOCK-207ENST00000508049 SKIV2LQ15477 1246 aaKnown RBP9.21□□□□□ -0.94
CLOCK-207ENST00000508049 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms