RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 BLMP54132 1417 aaPredicted RBP7.8□□□□□ -1.16
KDM3B-204ENST00000507996 RIPK4P57078 832 aa7.8□□□□□ -1.16
KDM3B-204ENST00000507996 IPO4Q8TEX9 1081 aaKnown RBP7.8□□□□□ -1.16
KDM3B-204ENST00000507996 BECN1Q14457 450 aa7.8□□□□□ -1.16
KDM3B-204ENST00000507996 PANK2Q9BZ23 570 aa7.8□□□□□ -1.16
KDM3B-204ENST00000507996 DISP3Q9P2K9 1392 aa7.8□□□□□ -1.16
KDM3B-204ENST00000507996 NRXN1Q9ULB1 1477 aa7.8□□□□□ -1.16
KDM3B-204ENST00000507996 WAPLQ7Z5K2 1190 aa7.79□□□□□ -1.16
KDM3B-204ENST00000507996 PRAM1Q96QH2 718 aa7.79□□□□□ -1.16
KDM3B-204ENST00000507996 MINK1Q8N4C8 1332 aaPredicted RBP7.79□□□□□ -1.16
KDM3B-204ENST00000507996 PTPRMP28827 1452 aa7.79□□□□□ -1.16
KDM3B-204ENST00000507996 UBR1Q8IWV7 1749 aa7.79□□□□□ -1.16
KDM3B-204ENST00000507996 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.78□□□□□ -1.16
KDM3B-204ENST00000507996 KIAA1211Q6ZU35 1233 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 TMC1Q8TDI8 760 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 GRPEL1Q9HAV7 217 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 ZFYVE9O95405 1425 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 ANKLE2Q86XL3 938 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 MYH16Q9H6N6 1097 aa7.78□□□□□ -1.16
KDM3B-204ENST00000507996 METP08581 1390 aa7.77□□□□□ -1.16
KDM3B-204ENST00000507996 HSPA2P54652 639 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 NAP1L2Q9ULW6 460 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-204ENST00000507996 MYO3AQ8NEV4 1616 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 ALKQ9UM73 1620 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 SRPK2P78362 688 aaKnown RBP7.77□□□□□ -1.17
KDM3B-204ENST00000507996 BBXQ8WY36 941 aaPredicted RBP7.77□□□□□ -1.17
KDM3B-204ENST00000507996 PPP1R9BQ96SB3 815 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 CRBNQ96SW2 442 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 KIAA1210Q9ULL0 1709 aa7.77□□□□□ -1.17
KDM3B-204ENST00000507996 YTHDC2Q9H6S0 1430 aaKnown RBP7.76□□□□□ -1.17
KDM3B-204ENST00000507996 ATXN8OSP0DMR3 200 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 MCM4P33991 863 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 CABP2Q9NPB3 220 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 ADGRB1O14514 1584 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 IQGAP1P46940 1657 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 KIF20AO95235 890 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 CANXP27824 592 aaKnown RBP7.76□□□□□ -1.17
KDM3B-204ENST00000507996 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 PANK3Q9H999 370 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 CEP170BQ9Y4F5 1589 aaPredicted RBP7.76□□□□□ -1.17
KDM3B-204ENST00000507996 MYBBP1AQ9BQG0 1328 aaKnown RBP7.76□□□□□ -1.17
KDM3B-204ENST00000507996 NCKAP5LQ9HCH0 1330 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 LAMC1P11047 1609 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 HS1BP3Q53T59 392 aa7.76□□□□□ -1.17
KDM3B-204ENST00000507996 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
KDM3B-204ENST00000507996 HOMEZQ8IX15 550 aa7.75□□□□□ -1.17
KDM3B-204ENST00000507996 GTPBP4Q9BZE4 634 aaKnown RBP7.75□□□□□ -1.17
KDM3B-204ENST00000507996 SETBP1Q9Y6X0 1596 aa7.75□□□□□ -1.17
KDM3B-204ENST00000507996 DYNC1I1O14576 645 aa7.75□□□□□ -1.17
KDM3B-204ENST00000507996 RALBP1Q15311 655 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 CC2D1BQ5T0F9 858 aaKnown RBP7.74□□□□□ -1.17
KDM3B-204ENST00000507996 ZSCAN30Q86W11 494 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 AMOTL2Q9Y2J4 779 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 NCOA3Q9Y6Q9 1424 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 ASXL1Q8IXJ9 1541 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 SETD1BQ9UPS6 1966 aaKnown RBP7.74□□□□□ -1.17
KDM3B-204ENST00000507996 IBTKQ9P2D0 1353 aaPredicted RBP7.74□□□□□ -1.17
KDM3B-204ENST00000507996 PLEKHG1Q9ULL1 1385 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 ZSCAN20P17040 1043 aaPredicted RBP7.74□□□□□ -1.17
KDM3B-204ENST00000507996 CCDC173Q0VFZ6 552 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 TAF3Q5VWG9 929 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 EVC2Q86UK5 1308 aa7.74□□□□□ -1.17
KDM3B-204ENST00000507996 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 TRIM44Q96DX7 344 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-204ENST00000507996 CCDC94Q9BW85 323 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-204ENST00000507996 ADAMTS13Q76LX8 1427 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 PARD3Q8TEW0 1356 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 TRAK2O60296 914 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 ZNF500O60304 480 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-204ENST00000507996 LETM1O95202 739 aaPredicted RBP7.73□□□□□ -1.17
KDM3B-204ENST00000507996 CDK19Q9BWU1 502 aa7.73□□□□□ -1.17
KDM3B-204ENST00000507996 SKAP1Q86WV1 359 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 TMEM51Q9NW97 253 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 KNSTRNQ9Y448 316 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 TBX22Q9Y458 520 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 QRICH2Q9H0J4 1663 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 NRXN3Q9Y4C0 1643 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 PTMSP20962 102 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 SLIT1O75093 1534 aa7.72□□□□□ -1.17
KDM3B-204ENST00000507996 KDM5AP29375 1690 aaKnown RBP7.72□□□□□ -1.17
KDM3B-204ENST00000507996 KCNA6P17658 529 aa7.71□□□□□ -1.17
KDM3B-204ENST00000507996 PPP4R3BQ5MIZ7 849 aa7.71□□□□□ -1.17
KDM3B-204ENST00000507996 ARHGAP23Q9P227 1491 aa7.71□□□□□ -1.17
KDM3B-204ENST00000507996 ARHGEF28Q8N1W1 1705 aaKnown RBP7.71□□□□□ -1.18
KDM3B-204ENST00000507996 MAPK8IP3Q9UPT6 1336 aa7.71□□□□□ -1.18
KDM3B-204ENST00000507996 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
KDM3B-204ENST00000507996 ABCC11Q96J66 1382 aa7.71□□□□□ -1.18
KDM3B-204ENST00000507996 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.18
KDM3B-204ENST00000507996 TBC1D32Q96NH3 1257 aa7.7□□□□□ -1.18
KDM3B-204ENST00000507996 CHMP5Q9NZZ3 219 aa7.7□□□□□ -1.18
KDM3B-204ENST00000507996 PTPRUQ92729 1446 aa7.69□□□□□ -1.18
KDM3B-204ENST00000507996 DDIT3P35638 169 aa7.69□□□□□ -1.18
KDM3B-204ENST00000507996 CABP1Q9NZU7 370 aa7.69□□□□□ -1.18
KDM3B-204ENST00000507996 ATF5Q9Y2D1 282 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-204ENST00000507996 PER1O15534 1290 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-204ENST00000507996 MCM5P33992 734 aa7.69□□□□□ -1.18
KDM3B-204ENST00000507996 TNNT2P45379 298 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms