RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 NUTM2FA1L443 756 aa18.78■□□□□ 0.6
DDX41-208ENST00000507955 PLEKHF1Q96S99 279 aa18.78■□□□□ 0.6
DDX41-208ENST00000507955 RLBP1P12271 317 aa18.78■□□□□ 0.6
DDX41-208ENST00000507955 NINLQ9Y2I6 1382 aa18.78■□□□□ 0.6
DDX41-208ENST00000507955 CENPQQ7L2Z9 268 aaPredicted RBP18.77■□□□□ 0.6
DDX41-208ENST00000507955 WDR63Q8IWG1 891 aa18.77■□□□□ 0.6
DDX41-208ENST00000507955 TMPOP42166 694 aaKnown RBP18.76■□□□□ 0.59
DDX41-208ENST00000507955 NME9Q86XW9 330 aa18.76■□□□□ 0.59
DDX41-208ENST00000507955 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
DDX41-208ENST00000507955 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
DDX41-208ENST00000507955 MS4A1P11836 297 aa18.75■□□□□ 0.59
DDX41-208ENST00000507955 WASLO00401 505 aaPredicted RBP18.74■□□□□ 0.59
DDX41-208ENST00000507955 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
DDX41-208ENST00000507955 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
DDX41-208ENST00000507955 COL3A1P02461 1466 aaPredicted RBP18.74■□□□□ 0.59
DDX41-208ENST00000507955 HMOX1P09601 288 aa18.73■□□□□ 0.59
DDX41-208ENST00000507955 CCDC27Q2M243 656 aa18.73■□□□□ 0.59
DDX41-208ENST00000507955 SETD1AO15047 1707 aaKnown RBP18.73■□□□□ 0.59
DDX41-208ENST00000507955 RIPK4P57078 832 aa18.72■□□□□ 0.59
DDX41-208ENST00000507955 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
DDX41-208ENST00000507955 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
DDX41-208ENST00000507955 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
DDX41-208ENST00000507955 NUDT16Q96DE0 195 aaKnown RBP18.72■□□□□ 0.59
DDX41-208ENST00000507955 LTKP29376 864 aa18.71■□□□□ 0.59
DDX41-208ENST00000507955 PDE3AQ14432 1141 aa18.71■□□□□ 0.59
DDX41-208ENST00000507955 PPIP5K1Q6PFW1 1433 aa18.71■□□□□ 0.59
DDX41-208ENST00000507955 TNRQ92752 1358 aa18.7■□□□□ 0.58
DDX41-208ENST00000507955 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
DDX41-208ENST00000507955 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
DDX41-208ENST00000507955 MYH16Q9H6N6 1097 aa18.7■□□□□ 0.58
DDX41-208ENST00000507955 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.7■□□□□ 0.58
DDX41-208ENST00000507955 PRKAR2BP31323 418 aa18.69■□□□□ 0.58
DDX41-208ENST00000507955 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
DDX41-208ENST00000507955 THUMPD2Q9BTF0 503 aaKnown RBP18.68■□□□□ 0.58
DDX41-208ENST00000507955 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
DDX41-208ENST00000507955 PRR36Q9H6K5 1346 aa18.67■□□□□ 0.58
DDX41-208ENST00000507955 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
DDX41-208ENST00000507955 ADGRB2O60241 1585 aa18.67■□□□□ 0.58
DDX41-208ENST00000507955 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
DDX41-208ENST00000507955 ROBO2Q9HCK4 1378 aa18.66■□□□□ 0.58
DDX41-208ENST00000507955 DLC1Q96QB1 1528 aa18.66■□□□□ 0.58
DDX41-208ENST00000507955 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
DDX41-208ENST00000507955 MED14O60244 1454 aa18.65■□□□□ 0.58
DDX41-208ENST00000507955 C8orf34Q49A92 452 aa18.65■□□□□ 0.58
DDX41-208ENST00000507955 ANKRD26Q9UPS8 1709 aa18.65■□□□□ 0.58
DDX41-208ENST00000507955 CCDC61Q9Y6R9 512 aa18.65■□□□□ 0.58
DDX41-208ENST00000507955 KIF20BQ96Q89 1820 aa18.64■□□□□ 0.57
DDX41-208ENST00000507955 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
DDX41-208ENST00000507955 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
DDX41-208ENST00000507955 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.57
DDX41-208ENST00000507955 SOX12O15370 315 aa18.63■□□□□ 0.57
DDX41-208ENST00000507955 CPS1P31327 1500 aa18.63■□□□□ 0.57
DDX41-208ENST00000507955 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
DDX41-208ENST00000507955 MAP2P11137 1827 aaKnown RBP18.63■□□□□ 0.57
DDX41-208ENST00000507955 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
DDX41-208ENST00000507955 ATP7BP35670 1465 aa18.62■□□□□ 0.57
DDX41-208ENST00000507955 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
DDX41-208ENST00000507955 HDGFP51858 240 aaKnown RBP18.62■□□□□ 0.57
DDX41-208ENST00000507955 FCHSD2O94868 740 aa18.61■□□□□ 0.57
DDX41-208ENST00000507955 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
DDX41-208ENST00000507955 FAM161AQ3B820 660 aa18.6■□□□□ 0.57
DDX41-208ENST00000507955 COG3Q96JB2 828 aa18.6■□□□□ 0.57
DDX41-208ENST00000507955 TRIM27P14373 513 aa18.6■□□□□ 0.57
DDX41-208ENST00000507955 FTSJ3Q8IY81 847 aaKnown RBP18.6■□□□□ 0.57
DDX41-208ENST00000507955 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
DDX41-208ENST00000507955 ELL2O00472 640 aaPredicted RBP18.59■□□□□ 0.57
DDX41-208ENST00000507955 IL13P35225 146 aa18.59■□□□□ 0.57
DDX41-208ENST00000507955 ZKSCAN2Q63HK3 967 aa18.59■□□□□ 0.57
DDX41-208ENST00000507955 NOB1Q9ULX3 412 aaKnown RBP18.59■□□□□ 0.57
DDX41-208ENST00000507955 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
DDX41-208ENST00000507955 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
DDX41-208ENST00000507955 DZIP1LQ8IYY4 767 aaKnown RBP18.58■□□□□ 0.56
DDX41-208ENST00000507955 FAM83GA6ND36 823 aa18.57■□□□□ 0.56
DDX41-208ENST00000507955 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
DDX41-208ENST00000507955 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
DDX41-208ENST00000507955 ACEP12821 1306 aa18.56■□□□□ 0.56
DDX41-208ENST00000507955 DCTN1Q14203 1278 aa18.56■□□□□ 0.56
DDX41-208ENST00000507955 NEFMP07197 916 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
DDX41-208ENST00000507955 ITPRIPQ8IWB1 547 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 FAM135BQ49AJ0 1406 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 SEC24BO95487 1268 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
DDX41-208ENST00000507955 PTPRUQ92729 1446 aa18.54■□□□□ 0.56
DDX41-208ENST00000507955 AMOTL2Q9Y2J4 779 aa18.54■□□□□ 0.56
DDX41-208ENST00000507955 TECPR2O15040 1411 aa18.54■□□□□ 0.56
DDX41-208ENST00000507955 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
DDX41-208ENST00000507955 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
DDX41-208ENST00000507955 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
DDX41-208ENST00000507955 TMEM57Q8N5G2 664 aa18.53■□□□□ 0.56
DDX41-208ENST00000507955 PDZRN3Q9UPQ7 1066 aa18.53■□□□□ 0.56
DDX41-208ENST00000507955 CDC42BPGQ6DT37 1551 aa18.53■□□□□ 0.56
DDX41-208ENST00000507955 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
DDX41-208ENST00000507955 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
DDX41-208ENST00000507955 SIRT1Q96EB6 747 aa18.52■□□□□ 0.56
DDX41-208ENST00000507955 IL16Q14005 1332 aa18.51■□□□□ 0.55
DDX41-208ENST00000507955 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
DDX41-208ENST00000507955 EID1Q9Y6B2 187 aa18.51■□□□□ 0.55
DDX41-208ENST00000507955 HSP90AB2PQ58FF8 381 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms