RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ANKRD36BQ8N2N9 1353 aa17.83■□□□□ 0.45
TCOF1-210ENST00000506767 SPATA31A3Q5VYP0 1347 aa17.83■□□□□ 0.44
TCOF1-210ENST00000506767 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
TCOF1-210ENST00000506767 HDGFL2Q7Z4V5 671 aaPredicted RBP17.82■□□□□ 0.44
TCOF1-210ENST00000506767 POLR3GLQ9BT43 218 aa17.82■□□□□ 0.44
TCOF1-210ENST00000506767 ALS2Q96Q42 1657 aa17.82■□□□□ 0.44
TCOF1-210ENST00000506767 NRKQ7Z2Y5 1582 aa17.82■□□□□ 0.44
TCOF1-210ENST00000506767 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
TCOF1-210ENST00000506767 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
TCOF1-210ENST00000506767 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
TCOF1-210ENST00000506767 JCADQ9P266 1359 aa17.79■□□□□ 0.44
TCOF1-210ENST00000506767 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
TCOF1-210ENST00000506767 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
TCOF1-210ENST00000506767 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
TCOF1-210ENST00000506767 EDC4Q6P2E9 1401 aaKnown RBP17.78■□□□□ 0.44
TCOF1-210ENST00000506767 PAK3O75914 559 aaPredicted RBP17.77■□□□□ 0.44
TCOF1-210ENST00000506767 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
TCOF1-210ENST00000506767 ARHGEF10O15013 1369 aa17.77■□□□□ 0.43
TCOF1-210ENST00000506767 TTC21AQ8NDW8 1320 aa17.76■□□□□ 0.43
TCOF1-210ENST00000506767 PANK3Q9H999 370 aa17.75■□□□□ 0.43
TCOF1-210ENST00000506767 PIK3C2AO00443 1686 aa17.74■□□□□ 0.43
TCOF1-210ENST00000506767 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
TCOF1-210ENST00000506767 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
TCOF1-210ENST00000506767 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
TCOF1-210ENST00000506767 USP54Q70EL1 1684 aa17.72■□□□□ 0.43
TCOF1-210ENST00000506767 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
TCOF1-210ENST00000506767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
TCOF1-210ENST00000506767 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
TCOF1-210ENST00000506767 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
TCOF1-210ENST00000506767 USP31Q70CQ4 1352 aa17.71■□□□□ 0.43
TCOF1-210ENST00000506767 ZNF316A6NFI3 1004 aaPredicted RBP17.71■□□□□ 0.43
TCOF1-210ENST00000506767 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
TCOF1-210ENST00000506767 PER1O15534 1290 aaPredicted RBP17.7■□□□□ 0.42
TCOF1-210ENST00000506767 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
TCOF1-210ENST00000506767 NME9Q86XW9 330 aa17.7■□□□□ 0.42
TCOF1-210ENST00000506767 FYB1O15117 783 aa17.69■□□□□ 0.42
TCOF1-210ENST00000506767 NLRP6P59044 892 aa17.69■□□□□ 0.42
TCOF1-210ENST00000506767 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
TCOF1-210ENST00000506767 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
TCOF1-210ENST00000506767 USP19O94966 1318 aa17.69■□□□□ 0.42
TCOF1-210ENST00000506767 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
TCOF1-210ENST00000506767 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
TCOF1-210ENST00000506767 PHRF1Q9P1Y6 1649 aaKnown RBP17.68■□□□□ 0.42
TCOF1-210ENST00000506767 SLIT3O75094 1523 aa17.67■□□□□ 0.42
TCOF1-210ENST00000506767 OVOS2A0A0J9YW53 1432 aa17.67■□□□□ 0.42
TCOF1-210ENST00000506767 OVOS2Q6IE36 1432 aa17.67■□□□□ 0.42
TCOF1-210ENST00000506767 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
TCOF1-210ENST00000506767 LRP6O75581 1613 aa17.67■□□□□ 0.42
TCOF1-210ENST00000506767 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
TCOF1-210ENST00000506767 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
TCOF1-210ENST00000506767 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
TCOF1-210ENST00000506767 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
TCOF1-210ENST00000506767 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
TCOF1-210ENST00000506767 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
TCOF1-210ENST00000506767 GCP02774 474 aa17.63■□□□□ 0.41
TCOF1-210ENST00000506767 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
TCOF1-210ENST00000506767 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
TCOF1-210ENST00000506767 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
TCOF1-210ENST00000506767 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
TCOF1-210ENST00000506767 COG3Q96JB2 828 aa17.62■□□□□ 0.41
TCOF1-210ENST00000506767 NSD2O96028 1365 aa17.62■□□□□ 0.41
TCOF1-210ENST00000506767 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
TCOF1-210ENST00000506767 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
TCOF1-210ENST00000506767 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
TCOF1-210ENST00000506767 NFAT5O94916 1531 aa17.61■□□□□ 0.41
TCOF1-210ENST00000506767 CPDO75976 1380 aa17.59■□□□□ 0.41
TCOF1-210ENST00000506767 HAP1P54257 671 aaPredicted RBP17.59■□□□□ 0.41
TCOF1-210ENST00000506767 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
TCOF1-210ENST00000506767 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.4
TCOF1-210ENST00000506767 ZC3H6P61129 1189 aaKnown RBP17.57■□□□□ 0.4
TCOF1-210ENST00000506767 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
TCOF1-210ENST00000506767 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
TCOF1-210ENST00000506767 ARHGEF25Q86VW2 580 aa17.56■□□□□ 0.4
TCOF1-210ENST00000506767 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
TCOF1-210ENST00000506767 COL18A1P39060 1754 aa17.55■□□□□ 0.4
TCOF1-210ENST00000506767 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
TCOF1-210ENST00000506767 SOX12O15370 315 aa17.54■□□□□ 0.4
TCOF1-210ENST00000506767 FBLN1P23142 703 aa17.54■□□□□ 0.4
TCOF1-210ENST00000506767 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
TCOF1-210ENST00000506767 C8orf37Q96NL8 207 aa17.54■□□□□ 0.4
TCOF1-210ENST00000506767 LMO7Q8WWI1 1683 aa17.54■□□□□ 0.4
TCOF1-210ENST00000506767 LTN1O94822 1766 aa17.53■□□□□ 0.4
TCOF1-210ENST00000506767 SLIT2O94813 1529 aa17.53■□□□□ 0.4
TCOF1-210ENST00000506767 PLCH1Q4KWH8 1693 aa17.53■□□□□ 0.4
TCOF1-210ENST00000506767 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
TCOF1-210ENST00000506767 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
TCOF1-210ENST00000506767 PRDM11Q9NQV5 511 aa17.53■□□□□ 0.4
TCOF1-210ENST00000506767 ABCC6O95255 1503 aa17.52■□□□□ 0.4
TCOF1-210ENST00000506767 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
TCOF1-210ENST00000506767 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
TCOF1-210ENST00000506767 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
TCOF1-210ENST00000506767 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
TCOF1-210ENST00000506767 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
TCOF1-210ENST00000506767 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
TCOF1-210ENST00000506767 CAMTA1Q9Y6Y1 1673 aa17.5■□□□□ 0.39
TCOF1-210ENST00000506767 AFF2P51816 1311 aa17.49■□□□□ 0.39
TCOF1-210ENST00000506767 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
TCOF1-210ENST00000506767 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
TCOF1-210ENST00000506767 NRAPQ86VF7 1730 aa17.49■□□□□ 0.39
TCOF1-210ENST00000506767 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms