RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NUDT16Q96DE0 195 aaKnown RBP10.26□□□□□ -0.77
GYPB-206ENST00000506516 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
GYPB-206ENST00000506516 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
GYPB-206ENST00000506516 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
GYPB-206ENST00000506516 EVC2Q86UK5 1308 aa10.25□□□□□ -0.77
GYPB-206ENST00000506516 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
GYPB-206ENST00000506516 ANKARQ7Z5J8 1434 aa10.24□□□□□ -0.77
GYPB-206ENST00000506516 KRT28Q7Z3Y7 464 aa10.24□□□□□ -0.77
GYPB-206ENST00000506516 NGDNQ8NEJ9 315 aaKnown RBP10.24□□□□□ -0.77
GYPB-206ENST00000506516 PMFBP1Q8TBY8 1022 aa10.24□□□□□ -0.77
GYPB-206ENST00000506516 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
GYPB-206ENST00000506516 AHDC1Q5TGY3 1603 aaPredicted RBP10.24□□□□□ -0.77
GYPB-206ENST00000506516 SPATA31A6Q5VVP1 1343 aa10.24□□□□□ -0.77
GYPB-206ENST00000506516 PHLPP1O60346 1717 aa10.24□□□□□ -0.77
GYPB-206ENST00000506516 RALGAPBQ86X10 1494 aa10.23□□□□□ -0.77
GYPB-206ENST00000506516 CABP2Q9NPB3 220 aa10.23□□□□□ -0.77
GYPB-206ENST00000506516 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
GYPB-206ENST00000506516 ARHGEF28Q8N1W1 1705 aaKnown RBP10.22□□□□□ -0.77
GYPB-206ENST00000506516 XPCQ01831 940 aaPredicted RBP10.22□□□□□ -0.77
GYPB-206ENST00000506516 PRR36Q9H6K5 1346 aa10.22□□□□□ -0.77
GYPB-206ENST00000506516 TULP4Q9NRJ4 1543 aa10.22□□□□□ -0.77
GYPB-206ENST00000506516 FMN2Q9NZ56 1722 aa10.21□□□□□ -0.77
GYPB-206ENST00000506516 ST20-MTHFSA0A0A6YYL1 179 aa10.21□□□□□ -0.77
GYPB-206ENST00000506516 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
GYPB-206ENST00000506516 MEX3CQ5U5Q3 659 aaKnown RBP10.21□□□□□ -0.77
GYPB-206ENST00000506516 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.78
GYPB-206ENST00000506516 NUTM2BA6NNL0 878 aaPredicted RBP10.2□□□□□ -0.78
GYPB-206ENST00000506516 NUTM2EB1AL46 878 aaPredicted RBP10.2□□□□□ -0.78
GYPB-206ENST00000506516 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
GYPB-206ENST00000506516 COL16A1Q07092 1604 aaPredicted RBP10.2□□□□□ -0.78
GYPB-206ENST00000506516 LMOD2Q6P5Q4 547 aa10.2□□□□□ -0.78
GYPB-206ENST00000506516 NUTM2AQ8IVF1 878 aaPredicted RBP10.2□□□□□ -0.78
GYPB-206ENST00000506516 NHSL1Q5SYE7 1610 aa10.19□□□□□ -0.78
GYPB-206ENST00000506516 SBNO2Q9Y2G9 1366 aa10.19□□□□□ -0.78
GYPB-206ENST00000506516 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
GYPB-206ENST00000506516 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
GYPB-206ENST00000506516 NUBP1P53384 320 aa10.19□□□□□ -0.78
GYPB-206ENST00000506516 CABP1Q9NZU7 370 aa10.19□□□□□ -0.78
GYPB-206ENST00000506516 SBNO1A3KN83 1393 aa10.18□□□□□ -0.78
GYPB-206ENST00000506516 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
GYPB-206ENST00000506516 ACEP12821 1306 aa10.18□□□□□ -0.78
GYPB-206ENST00000506516 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
GYPB-206ENST00000506516 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
GYPB-206ENST00000506516 KIF1AQ12756 1690 aa10.18□□□□□ -0.78
GYPB-206ENST00000506516 PXDNQ92626 1479 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 USP47Q96K76 1375 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 TMF1P82094 1093 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 EVX2Q03828 476 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 ATP7BP35670 1465 aa10.17□□□□□ -0.78
GYPB-206ENST00000506516 ARHGEF10O15013 1369 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 QRICH2Q9H0J4 1663 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 USP32Q8NFA0 1604 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
GYPB-206ENST00000506516 GSE1Q14687 1217 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 TMC1Q8TDI8 760 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 TESK2Q96S53 571 aa10.16□□□□□ -0.78
GYPB-206ENST00000506516 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
GYPB-206ENST00000506516 POLR3AO14802 1390 aaPredicted RBP10.15□□□□□ -0.78
GYPB-206ENST00000506516 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
GYPB-206ENST00000506516 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
GYPB-206ENST00000506516 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.78
GYPB-206ENST00000506516 RGPD8O14715 1765 aaPredicted RBP10.14□□□□□ -0.79
GYPB-206ENST00000506516 ZNF772Q68DY9 489 aaPredicted RBP10.14□□□□□ -0.79
GYPB-206ENST00000506516 ABTB2Q8N961 1025 aa10.14□□□□□ -0.79
GYPB-206ENST00000506516 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
GYPB-206ENST00000506516 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
GYPB-206ENST00000506516 SHPRHQ149N8 1683 aa10.14□□□□□ -0.79
GYPB-206ENST00000506516 TNS3Q68CZ2 1445 aa10.14□□□□□ -0.79
GYPB-206ENST00000506516 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
GYPB-206ENST00000506516 DCAF8Q5TAQ9 597 aa10.13□□□□□ -0.79
GYPB-206ENST00000506516 HDGFL2Q7Z4V5 671 aaPredicted RBP10.13□□□□□ -0.79
GYPB-206ENST00000506516 TERF2IPQ9NYB0 399 aa10.13□□□□□ -0.79
GYPB-206ENST00000506516 RGL2O15211 777 aa10.12□□□□□ -0.79
GYPB-206ENST00000506516 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
GYPB-206ENST00000506516 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
GYPB-206ENST00000506516 SLC12A5Q9H2X9 1139 aa10.12□□□□□ -0.79
GYPB-206ENST00000506516 ITSN1Q15811 1721 aa10.12□□□□□ -0.79
GYPB-206ENST00000506516 HSPA5P11021 654 aaKnown RBP10.11□□□□□ -0.79
GYPB-206ENST00000506516 NLRP13Q86W25 1043 aa10.11□□□□□ -0.79
GYPB-206ENST00000506516 RGS17Q9UGC6 210 aaPredicted RBP10.11□□□□□ -0.79
GYPB-206ENST00000506516 LRP6O75581 1613 aa10.11□□□□□ -0.79
GYPB-206ENST00000506516 AFF2P51816 1311 aa10.1□□□□□ -0.79
GYPB-206ENST00000506516 NLRP6P59044 892 aa10.1□□□□□ -0.79
GYPB-206ENST00000506516 NUTM2GQ5VZR2 741 aa10.1□□□□□ -0.79
GYPB-206ENST00000506516 USP21Q9UK80 565 aa10.1□□□□□ -0.79
GYPB-206ENST00000506516 KTN1Q86UP2 1357 aaKnown RBP10.1□□□□□ -0.79
GYPB-206ENST00000506516 NINLQ9Y2I6 1382 aa10.1□□□□□ -0.79
GYPB-206ENST00000506516 COL22A1Q8NFW1 1626 aaPredicted RBP10.09□□□□□ -0.79
GYPB-206ENST00000506516 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
GYPB-206ENST00000506516 FNBP4Q8N3X1 1017 aaPredicted RBP10.09□□□□□ -0.79
GYPB-206ENST00000506516 QTRT2Q9H974 415 aaKnown RBP10.09□□□□□ -0.79
GYPB-206ENST00000506516 TTC21BQ7Z4L5 1316 aa10.08□□□□□ -0.8
GYPB-206ENST00000506516 TTC21AQ8NDW8 1320 aa10.08□□□□□ -0.8
GYPB-206ENST00000506516 USP6P35125 1406 aa10.08□□□□□ -0.8
GYPB-206ENST00000506516 POTEAQ6S8J7 498 aa10.08□□□□□ -0.8
GYPB-206ENST00000506516 POLR3GLQ9BT43 218 aa10.08□□□□□ -0.8
GYPB-206ENST00000506516 TOPAZ1Q8N9V7 1692 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms