RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 NXF1Q9UBU9 619 aaKnown RBP11.95□□□□□ -0.5
CHD1-204ENST00000505982 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
CHD1-204ENST00000505982 BMP1P13497 986 aa11.94□□□□□ -0.5
CHD1-204ENST00000505982 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
CHD1-204ENST00000505982 TRIM46Q7Z4K8 759 aa11.94□□□□□ -0.5
CHD1-204ENST00000505982 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
CHD1-204ENST00000505982 AMHR2Q16671 573 aa11.93□□□□□ -0.5
CHD1-204ENST00000505982 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
CHD1-204ENST00000505982 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
CHD1-204ENST00000505982 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
CHD1-204ENST00000505982 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
CHD1-204ENST00000505982 MPNDQ8N594 471 aa11.91□□□□□ -0.5
CHD1-204ENST00000505982 ZNF511Q8NB15 262 aa11.91□□□□□ -0.5
CHD1-204ENST00000505982 TRIM66O15016 1216 aa11.9□□□□□ -0.5
CHD1-204ENST00000505982 BEGAINQ9BUH8 593 aa11.9□□□□□ -0.5
CHD1-204ENST00000505982 TLL2Q9Y6L7 1015 aa11.9□□□□□ -0.5
CHD1-204ENST00000505982 GJA5P36382 358 aa11.89□□□□□ -0.51
CHD1-204ENST00000505982 PDE4DQ08499 809 aa11.88□□□□□ -0.51
CHD1-204ENST00000505982 IRF7Q92985 503 aa11.88□□□□□ -0.51
CHD1-204ENST00000505982 CTHP32929 405 aa11.87□□□□□ -0.51
CHD1-204ENST00000505982 NNTQ13423 1086 aa11.87□□□□□ -0.51
CHD1-204ENST00000505982 ZFP42Q96MM3 310 aa11.87□□□□□ -0.51
CHD1-204ENST00000505982 KDM4CQ9H3R0 1056 aa11.87□□□□□ -0.51
CHD1-204ENST00000505982 FAM181BA6NEQ2 426 aa11.86□□□□□ -0.51
CHD1-204ENST00000505982 TBC1D2Q9BYX2 928 aa11.86□□□□□ -0.51
CHD1-204ENST00000505982 LYPD8Q6UX82 237 aa11.85□□□□□ -0.51
CHD1-204ENST00000505982 IL27Q8NEV9 243 aa11.85□□□□□ -0.51
CHD1-204ENST00000505982 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
CHD1-204ENST00000505982 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
CHD1-204ENST00000505982 SCARF1Q14162 830 aa11.83□□□□□ -0.52
CHD1-204ENST00000505982 ADH1CP00326 375 aa11.82□□□□□ -0.52
CHD1-204ENST00000505982 GMPRP36959 345 aa11.82□□□□□ -0.52
CHD1-204ENST00000505982 MRPL14Q6P1L8 145 aaKnown RBP11.82□□□□□ -0.52
CHD1-204ENST00000505982 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
CHD1-204ENST00000505982 H3BM21 787 aa11.81□□□□□ -0.52
CHD1-204ENST00000505982 VEGFBP49765 207 aa11.81□□□□□ -0.52
CHD1-204ENST00000505982 WDR4P57081 412 aaKnown RBP11.81□□□□□ -0.52
CHD1-204ENST00000505982 PCDHB15Q9Y5E8 787 aa11.81□□□□□ -0.52
CHD1-204ENST00000505982 SPTLC1O15269 473 aa11.8□□□□□ -0.52
CHD1-204ENST00000505982 CFAP99D6REC4 459 aa11.79□□□□□ -0.52
CHD1-204ENST00000505982 TIMP2P16035 220 aa11.79□□□□□ -0.52
CHD1-204ENST00000505982 HRCP23327 699 aa11.79□□□□□ -0.52
CHD1-204ENST00000505982 ZSCAN1Q8NBB4 408 aa11.79□□□□□ -0.52
CHD1-204ENST00000505982 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
CHD1-204ENST00000505982 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
CHD1-204ENST00000505982 CDK15Q96Q40 435 aa11.78□□□□□ -0.52
CHD1-204ENST00000505982 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
CHD1-204ENST00000505982 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
CHD1-204ENST00000505982 RIC3Q7Z5B4 369 aa11.77□□□□□ -0.53
CHD1-204ENST00000505982 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
CHD1-204ENST00000505982 AGERQ15109 404 aa11.76□□□□□ -0.53
CHD1-204ENST00000505982 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
CHD1-204ENST00000505982 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
CHD1-204ENST00000505982 MAP10Q9P2G4 905 aa11.76□□□□□ -0.53
CHD1-204ENST00000505982 NR5A1Q13285 461 aa11.74□□□□□ -0.53
CHD1-204ENST00000505982 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
CHD1-204ENST00000505982 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
CHD1-204ENST00000505982 ZIC2O95409 532 aaPredicted RBP11.72□□□□□ -0.53
CHD1-204ENST00000505982 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
CHD1-204ENST00000505982 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
CHD1-204ENST00000505982 LORP23490 312 aaPredicted RBP11.71□□□□□ -0.53
CHD1-204ENST00000505982 FAM117AQ9C073 453 aa11.71□□□□□ -0.53
CHD1-204ENST00000505982 ARMC2Q8NEN0 867 aa11.7□□□□□ -0.54
CHD1-204ENST00000505982 TSC1Q92574 1164 aa11.7□□□□□ -0.54
CHD1-204ENST00000505982 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
CHD1-204ENST00000505982 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
CHD1-204ENST00000505982 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
CHD1-204ENST00000505982 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
CHD1-204ENST00000505982 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
CHD1-204ENST00000505982 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
CHD1-204ENST00000505982 ITPKCQ96DU7 683 aa11.69□□□□□ -0.54
CHD1-204ENST00000505982 ZFAND3Q9H8U3 227 aa11.69□□□□□ -0.54
CHD1-204ENST00000505982 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
CHD1-204ENST00000505982 MAN1A2O60476 641 aa11.68□□□□□ -0.54
CHD1-204ENST00000505982 UPP2O95045 317 aa11.68□□□□□ -0.54
CHD1-204ENST00000505982 GRM5P41594 1212 aa11.68□□□□□ -0.54
CHD1-204ENST00000505982 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
CHD1-204ENST00000505982 NR3C2P08235 984 aa11.67□□□□□ -0.54
CHD1-204ENST00000505982 C6orf118Q5T5N4 469 aa11.67□□□□□ -0.54
CHD1-204ENST00000505982 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
CHD1-204ENST00000505982 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
CHD1-204ENST00000505982 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
CHD1-204ENST00000505982 BMP2P12643 396 aa11.64□□□□□ -0.55
CHD1-204ENST00000505982 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
CHD1-204ENST00000505982 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
CHD1-204ENST00000505982 LILRB3O75022 631 aa11.63□□□□□ -0.55
CHD1-204ENST00000505982 QPCTQ16769 361 aa11.63□□□□□ -0.55
CHD1-204ENST00000505982 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
CHD1-204ENST00000505982 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
CHD1-204ENST00000505982 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
CHD1-204ENST00000505982 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
CHD1-204ENST00000505982 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
CHD1-204ENST00000505982 MAP4K5Q9Y4K4 846 aa11.61□□□□□ -0.55
CHD1-204ENST00000505982 VASH1Q7L8A9 365 aaPredicted RBP11.6□□□□□ -0.55
CHD1-204ENST00000505982 FSHRP23945 695 aa11.59□□□□□ -0.55
CHD1-204ENST00000505982 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
CHD1-204ENST00000505982 EMILIN1Q9Y6C2 1016 aa11.59□□□□□ -0.55
CHD1-204ENST00000505982 MAGEB6P1A0A0J9YX57 407 aa11.58□□□□□ -0.56
CHD1-204ENST00000505982 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
CHD1-204ENST00000505982 PPFIA3O75145 1194 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms